CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
plasma membrane 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX96838	Canola	plastid	96.88	96.41
CDY39658	Canola	mitochondrion	93.76	93.0
CDY36568	Canola	mitochondrion	92.61	92.46
AT1G15500.1	Thale cress	mitochondrion	91.46	90.13
CDY57697	Canola	plastid	88.51	87.5
CDX79394	Canola	plastid	88.18	87.18
CDY39988	Canola	mitochondrion, plastid	87.52	86.67
CDX87299	Canola	mitochondrion, plastid	87.36	86.64
HORVU7Hr1G057290.1	Barley	endoplasmic reticulum, golgi	6.08	78.72
KRH09791	Soybean	extracellular	77.34	76.34
KRH44405	Soybean	endoplasmic reticulum	77.83	75.96
Solyc12g042950.1.1	Tomato	mitochondrion, plastid	78.16	75.68
KRH23529	Soybean	endoplasmic reticulum	76.35	75.61
KRH47502	Soybean	mitochondrion	77.34	75.6
PGSC0003DMT400073724	Potato	mitochondrion, plastid	78.0	75.28
VIT_09s0002g05710.t01	Wine grape	plastid	76.68	75.2
Solyc03g119970.2.1	Tomato	plastid	76.85	74.88
PGSC0003DMT400014304	Potato	plastid	76.52	74.44
TraesCS3A01G233300.1	Wheat	plastid	67.65	66.24
TraesCS3B01G262600.1	Wheat	plastid	67.49	66.08
TraesCS6A01G178000.1	Wheat	golgi	66.5	65.75
Os01t0647100-01	Rice	plastid	69.29	65.73
TraesCS6D01G166400.1	Wheat	mitochondrion, plastid	66.34	65.27
TraesCS6B01G206800.1	Wheat	golgi	66.34	65.16
Os02t0208100-01	Rice	plastid	67.32	65.08
EES03353	Sorghum	plastid	67.65	64.78
GSMUA_Achr7P08430_001	Banana	plastid	59.28	63.78
KXG29763	Sorghum	plastid	67.0	63.26
GSMUA_Achr10P...	Banana	mitochondrion	61.58	61.78
GSMUA_Achr2P16990_001	Banana	plastid	61.08	61.39
TraesCS3D01G219900.1	Wheat	golgi, unclear	67.49	61.34
Zm00001d039684_P001	Maize	cytosol	8.87	49.09

Protein Annotations

EnsemblPlants:CDX83974	EnsemblPlantsGene:GSBRNA2T00139757001	GO:A0A078D6H7	GO:GO:0003674	GO:GO:0005215	GO:GO:0005471
GO:GO:0005575	GO:GO:0006810	GO:GO:0006862	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021
InterPro:ADP_ATP_car	PANTHER:PTHR31187	PANTHER:PTHR31187:SF3	PFAM:PF03219	ProteinID:CDX83974	ProteinID:CDX83974.1
SEG:seg	TIGRFAMs:TIGR00769	TMHMM:TMhelix	UniParc:UPI0004EBC9B8	MapMan:24.2.2.14	:

Description

BnaC08g16710D

Coordinates

chrLK031834:-:1506893..1509248

Molecular Weight (calculated)

66652.7 Da

IEP (calculated)

9.917

GRAVY (calculated)

0.414

Length

609 amino acids

Sequence
(BLAST)

001: MEGLIQPRGI LSLPTKPIVA ARTLLPPSPA LKQRLFTRNL PPLSISSNGH TKVQSFHRNP LTISISHKER NRGFICKAES AAGEGDSVTT PNIFGVEVTT
101: LKKIIPLGLM FFCILFNYTI LRDTKDVLVV TAKGSSAEII PFLKTWVNLP MAIGFMLLYT KLSNVLSKKA LFYTVIIPFI AYFGAFGFVM YPLSNMIHPE
201: ALADKLLATL GPRFMGPLAI LRIWSFCLFY VMAELWGSVV VSVLFWGFAN QITTVDEAKK FYPLFGLGAN VALIFSGRTV KYFSNMRKNL GPGVDGWAVS
301: LKAMMSIVVG MGLAICFLYW WVNRYVPLPT RSKKKKVKPQ MGMMESLKFL VSSPYIRDLA TLVVAYGISI NLVEVTWKSK LKAQFPSPNE YSAFMGDFST
401: CTGIATFTMM LLSQYVFNKY GWGVAAKITP TVLLLTGVAF FSLILFGGPF APLVAKLGMT PLLAAVYVGA LQNIFSKSAK YSLFDPCKEM AYIPLDEDTK
501: VKGKAAIDVV CNPLGKSGGA LIQQFMILTF GSLASSTPYL GVILLGIVTA WLAAAKSLEG QFNTLMSEEE LEKEMERAAS LKIPVVSSEE AASGESTSQL
601: PETSSPSSI

Best Arabidopsis Sequence Match ( AT1G15500.1 )
(BLAST)

001: MEGLIQTRGI LSLPAKPIGV RRLLQPSHGL KQRLFTTNLP ALSLSSNGHK KFQAFQQIPL GISVSHKERS RGFICKAEAA AAGGGNVFDE GDTAAMAVSP
101: KIFGVEVTTL KKIVPLGLMF FCILFNYTIL RDTKDVLVVT AKGSSAEIIP FLKTWVNLPM AIGFMLLYTK LSNVLSKKAL FYTVIVPFIV YFGAFGFVMY
201: PLSNLIHPEA LADKLLATLG PRFMGPLAIM RIWSFCLFYV MAELWGSVVV SVLFWGFANQ ITTVDEAKKF YPLFGLGANV ALIFSGRTVK YFSNMRKNLG
301: PGVDGWAVSL KAMMSIVVGM GLAICFLYWW VNRYVPLPTR SKKKKVKPQM GTMESLKFLV SSPYIRDLAT LVVAYGISIN LVEVTWKSKL KAQFPSPNEY
401: SAFMGDFSTC TGIATFTMML LSQYVFKKYG WGVAAKITPT VLLLTGVAFF SLILFGGPFA PLVAKLGMTP LLAAVYVGAL QNIFSKSAKY SLFDPCKEMA
501: YIPLDEDTKV KGKAAIDVVC NPLGKSGGAL IQQFMILTFG SLANSTPYLG VILLGIVTAW LAAAKSLEGQ FNTLMSEEEL EREMERASSV KIPVVSQEDA
601: PSGETTSQLS EKSTPTGI

Arabidopsis Description

AATP2ADP,ATP carrier protein [Source:UniProtKB/TrEMBL;Acc:A0A178WDN7]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.