CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra016656.1-P	Field mustard	plastid	99.18	99.51
CDX83974	Canola	plastid	96.41	96.88
CDY39658	Canola	mitochondrion	91.83	91.53
CDY36568	Canola	mitochondrion	91.01	91.31
AT1G15500.1	Thale cress	mitochondrion	90.52	89.64
CDY57697	Canola	plastid	87.91	87.34
CDX79394	Canola	plastid	87.75	87.18
CDX87299	Canola	mitochondrion, plastid	86.76	86.48
CDY39988	Canola	mitochondrion, plastid	86.6	86.18
HORVU7Hr1G057290.1	Barley	endoplasmic reticulum, golgi	6.05	78.72
KRH09791	Soybean	extracellular	76.96	76.34
KRH44405	Soybean	endoplasmic reticulum	77.78	76.28
KRH47502	Soybean	mitochondrion	77.29	75.92
Solyc12g042950.1.1	Tomato	mitochondrion, plastid	77.94	75.83
KRH23529	Soybean	endoplasmic reticulum	75.65	75.28
PGSC0003DMT400073724	Potato	mitochondrion, plastid	77.61	75.28
VIT_09s0002g05710.t01	Wine grape	plastid	76.31	75.2
Solyc03g119970.2.1	Tomato	plastid	76.47	74.88
PGSC0003DMT400014304	Potato	plastid	76.14	74.44
TraesCS3B01G262600.1	Wheat	plastid	67.48	66.4
TraesCS3A01G233300.1	Wheat	plastid	67.48	66.4
Os01t0647100-01	Rice	plastid	69.28	66.04
TraesCS6A01G178000.1	Wheat	golgi	66.34	65.91
Os02t0208100-01	Rice	plastid	67.65	65.71
TraesCS6D01G166400.1	Wheat	mitochondrion, plastid	66.18	65.43
TraesCS6B01G206800.1	Wheat	golgi	66.18	65.32
EES03353	Sorghum	plastid	67.65	65.09
GSMUA_Achr7P08430_001	Banana	plastid	59.15	63.96
KXG29763	Sorghum	plastid	66.99	63.57
GSMUA_Achr10P...	Banana	mitochondrion	61.93	62.44
GSMUA_Achr2P16990_001	Banana	plastid	61.6	62.21
TraesCS3D01G219900.1	Wheat	golgi, unclear	67.81	61.94
Zm00001d039684_P001	Maize	cytosol	8.82	49.09

Protein Annotations

EnsemblPlants:CDX96838	EnsemblPlantsGene:GSBRNA2T00103075001	GO:A0A078EBS3	GO:GO:0003674	GO:GO:0005215	GO:GO:0005471
GO:GO:0005575	GO:GO:0006810	GO:GO:0006862	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021
InterPro:ADP_ATP_car	PANTHER:PTHR31187	PANTHER:PTHR31187:SF3	PFAM:PF03219	ProteinID:CDX96838	ProteinID:CDX96838.1
SEG:seg	TIGRFAMs:TIGR00769	TMHMM:TMhelix	UniParc:UPI0004EDB5C9	MapMan:24.2.2.14	:

Description

BnaA08g23810D

Coordinates

chrLK031895:-:1156121..1158528

Molecular Weight (calculated)

66858.0 Da

IEP (calculated)

9.917

GRAVY (calculated)

0.429

Length

612 amino acids

Sequence
(BLAST)

001: MEGLIQPRGI LSLPTKPIVA TRTLLPPSPA LKQRLFTRNL PPLSFSSNAP TKVQSFHRNP LTISISHKER INRGFICKAE ASAAAAAAGE GDSPNIFGVE
101: VTTLKKIIPL GLMFFCILFN YTILRDTKDV LVVTAKGSSA EIIPFLKTWV NLPMAIGFML LYTKLSNVLS KKALFYTVII PFIAYFGAFG FVMYPLSNMI
201: HPEALADKLL ATLGPRFMGP LAILRIWSFC LFYVMAELWG SVVVSVLFWG FANQITTVDE AKKFYPLFGL GANVALIFSG RTVKYFSNMR KNLGPGVDGW
301: AVSLKAMMSI VVGMGLAICF LYWWVNRYVP LPTRSKKKKV KPQMGMMESL KFLVSSPYIR DLATLVVAYG ISINLVEVTW KSKLKAQFPS PNEYSAFMGD
401: FSTCTGIATF TMMLLSQYVF NKYGWGVAAK ITPTVLLLTG VAFFSLILFG GPFAPLVAKL GMTPLLAAVY VGALQNIFSK SAKYSLFDPC KEMAYIPLDE
501: DTKVKGKAAI DVVCNPLGKS GGALIQQFMI LTFGSLASST PYLGVILLGI VTAWLAAAKS LEGQFNTLMS EEELEKEMER AASLKIPVVS SEEAASGEST
601: SQLPETSSPS SI

Best Arabidopsis Sequence Match ( AT1G15500.1 )
(BLAST)

001: MEGLIQTRGI LSLPAKPIGV RRLLQPSHGL KQRLFTTNLP ALSLSSNGHK KFQAFQQIPL GISVSHKERS RGFICKAEAA AAGGGNVFDE GDTAAMAVSP
101: KIFGVEVTTL KKIVPLGLMF FCILFNYTIL RDTKDVLVVT AKGSSAEIIP FLKTWVNLPM AIGFMLLYTK LSNVLSKKAL FYTVIVPFIV YFGAFGFVMY
201: PLSNLIHPEA LADKLLATLG PRFMGPLAIM RIWSFCLFYV MAELWGSVVV SVLFWGFANQ ITTVDEAKKF YPLFGLGANV ALIFSGRTVK YFSNMRKNLG
301: PGVDGWAVSL KAMMSIVVGM GLAICFLYWW VNRYVPLPTR SKKKKVKPQM GTMESLKFLV SSPYIRDLAT LVVAYGISIN LVEVTWKSKL KAQFPSPNEY
401: SAFMGDFSTC TGIATFTMML LSQYVFKKYG WGVAAKITPT VLLLTGVAFF SLILFGGPFA PLVAKLGMTP LLAAVYVGAL QNIFSKSAKY SLFDPCKEMA
501: YIPLDEDTKV KGKAAIDVVC NPLGKSGGAL IQQFMILTFG SLANSTPYLG VILLGIVTAW LAAAKSLEGQ FNTLMSEEEL EREMERASSV KIPVVSQEDA
601: PSGETTSQLS EKSTPTGI

Arabidopsis Description

AATP2ADP,ATP carrier protein [Source:UniProtKB/TrEMBL;Acc:A0A178WDN7]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.