Factsheet for VIT_09s0002g05710.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
VIT_12s0028g02240.t01
VIT_18s0001g09830.t01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G80300.1	VIT_12s0028g02240.t01	AT2G42580.1	19000166
AT1G80300.1	VIT_18s0001g09830.t01	AT2G42580.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc03g119970.2.1	Tomato	plastid	84.7	84.16
PGSC0003DMT400014304	Potato	plastid	84.7	84.03
KRH23529	Soybean	endoplasmic reticulum	82.61	83.41
KRH44405	Soybean	endoplasmic reticulum	83.25	82.85
KRH47502	Soybean	mitochondrion	82.93	82.66
KRH09791	Soybean	extracellular	82.13	82.66
PGSC0003DMT400073724	Potato	mitochondrion, plastid	83.74	82.41
Solyc12g042950.1.1	Tomato	mitochondrion, plastid	83.25	82.19
AT1G80300.1	Thale cress	plastid	79.55	79.17
CDX79394	Canola	plastid	78.1	78.73
CDY57697	Canola	plastid	77.78	78.41
CDY39988	Canola	mitochondrion, plastid	77.62	78.37
Bra003560.1-P	Field mustard	plastid	77.62	78.25
CDX87299	Canola	mitochondrion, plastid	77.29	78.18
Bra035190.1-P	Field mustard	mitochondrion, plastid	77.29	78.18
Bra026126.1-P	Field mustard	plastid	76.17	77.67
CDY36568	Canola	mitochondrion	76.17	77.54
AT1G15500.1	Thale cress	mitochondrion	76.97	77.35
CDY39658	Canola	mitochondrion	76.01	76.87
CDX83974	Canola	plastid	75.2	76.68
Bra016656.1-P	Field mustard	plastid	75.2	76.56
CDX96838	Canola	plastid	75.2	76.31
HORVU7Hr1G057290.1	Barley	endoplasmic reticulum, golgi	5.64	74.47
Os02t0208100-01	Rice	plastid	69.57	68.57
GSMUA_Achr7P08430_001	Banana	plastid	62.16	68.2
EES03353	Sorghum	plastid	69.08	67.45
TraesCS6A01G178000.1	Wheat	golgi	66.51	67.05
TraesCS6B01G206800.1	Wheat	golgi	66.67	66.77
TraesCS6D01G166400.1	Wheat	mitochondrion, plastid	66.51	66.72
Os01t0647100-01	Rice	plastid	68.92	66.67
TraesCS3A01G233300.1	Wheat	plastid	66.67	66.56
TraesCS3B01G262600.1	Wheat	plastid	66.67	66.56
KXG29763	Sorghum	plastid	67.95	65.43
GSMUA_Achr2P16990_001	Banana	plastid	63.12	64.69
GSMUA_Achr10P...	Banana	mitochondrion	63.12	64.58
TraesCS3D01G219900.1	Wheat	golgi, unclear	66.83	61.94
Zm00001d039684_P001	Maize	cytosol	8.21	46.36

Protein Annotations

EntrezGene:100258352	wikigene:100258352	MapMan:24.2.2.14	InterPro:ADP_ATP_car	ProteinID:AFD54199	ProteinID:AFD54199.1
EMBL:AM472940	ProteinID:CAN83628	ProteinID:CAN83628.1	ProteinID:CCB59546	ProteinID:CCB59546.1	UniProt:F6HX76
EMBL:FN596494	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005471
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006810	GO:GO:0006862	GO:GO:0008150	GO:GO:0008152	GO:GO:0009507	GO:GO:0009536
GO:GO:0015866	GO:GO:0015867	GO:GO:0016020	GO:GO:0016021	GO:GO:0031969	GO:GO:0051213
GO:GO:0055114	EMBL:JQ086556	EntrezGene:LOC100258352	wikigene:LOC100258352	PFAM:PF03219	PANTHER:PTHR31187
PANTHER:PTHR31187:SF3	TIGR:TC69105	TIGRFAMs:TIGR00769	TMHMM:TMhelix	UniParc:UPI00015C848B	ArrayExpress:VIT_09s0002g05710
EnsemblPlantsGene:VIT_09s0002g05710	EnsemblPlants:VIT_09s0002g05710.t01	unigene:Vvi.10377	RefSeq:XP_002285232	RefSeq:XP_002285232.1	SEG:seg

Description

ADP,ATP carrier protein [Source:UniProtKB/TrEMBL;Acc:F6HX76]

Coordinates

chr9:-:5453578..5458595

Molecular Weight (calculated)

68128.0 Da

IEP (calculated)

10.024

GRAVY (calculated)

0.366

Length

621 amino acids

Sequence
(BLAST)

001: MEAVLQTKGL LSLPSNPKFR VFNSQQGLRQ RLFVQKPKTL GGLSLPLNGF QKFQGFVAKP HDFCRQNRGF ICRAEAAAAA DGQSLFAEPE KPKFLGIETA
101: TFKKIVPLGL MFFCILFNYT ILRDTKDVLV VTAPGSSAEI IPFLKTWVNL PMAVGFMLLY TKLANVLSKQ ALFYTVIVPF IAFFGAFGFV LYPLSNFFHP
201: TALADKLLAA LGPRFLGPLA ILRIWSFCLF YVMAELWGSV VISVLFWGFA NQITTIDEAK RFYPLFGLGA NVALIFSGRT VKYFSNLRQN LGPGVDGWAI
301: SLKGMMSIVV LMGLAICFIY WWVNKSVPLP TRSKKKKEKV RLGTMESLKF LVSSRYIRDL ATLVVAYGIS INLVEVTWKS KLKAQFPSPN EYSSFMGDFS
401: TATGIATFTM MLLSQWIFNK YGWGAAAKIT PTVLLLTGVG FFSLILFGDP FAPALAKFGL TPLLAAVYVG AMQNIFSKSA KYSLFDPCKE MAYIPLDEDT
501: KVKGKAAIDV VCNPLGKSGG ALIQQFMILT FGSLANSTPY LGGILMVIVV AWLAAAKSLD TQFTALRREE ELEKEMERAT VKIPVVAQDE SGNGSLASDP
601: ALNPAGGDSS SSSSETTPRN I

Best Arabidopsis Sequence Match ( AT1G80300.1 )
(BLAST)

001: MEAVIQTRGL LSLPTKPIGV RSQLQPSHGL KQRLFAAKPR NLHGLSLSFN GHKKFQTFEP TLHGISISHK ERSTEFICKA EAAAAGDGAV FGEGDSAAVV
101: ASPKIFGVEV ATLKKIIPLG LMFFCILFNY TILRDTKDVL VVTAKGSSAE IIPFLKTWVN LPMAIGFMLL YTKLSNVLSK KALFYTVIVP FIIYFGAFGF
201: VMYPLSNYIH PEALADKLLT TLGPRFMGPI AILRIWSFCL FYVMAELWGS VVVSVLFWGF ANQITTVDEA KKFYPLFGLG ANVALIFSGR TVKYFSNLRK
301: NLGPGVDGWA VSLKAMMSIV VGMGLAICLL YWWVNRYVPL PTRSKNKKEK PKMGTMESLK FLVSSPYIRD LATLVVAYGI SINLVEVTWK SKLKAQFPSP
401: NEYSAFMGDF STCTGVATFT MMLLSQYVFN KYGWGVAAKI TPTVLLLTGV AFFSLILFGG PFAPLVAKLG MTPLLAAVYV GALQNIFSKS AKYSLFDPCK
501: EMAYIPLDED TKVKGKAAID VVCNPLGKSG GALIQQFMIL SFGSLANSTP YLGMILLVIV TAWLAAAKSL EGQFNSLRSE EELEKEMERA SSVKIPVVSQ
601: DESGNGSLGE SPSSSPEKSA PTNL

Arabidopsis Description

AATP1ADP,ATP carrier protein 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q39002]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.