Factsheet for Zm00001d039684_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d004494_P001
Zm00001d006366_P001
Zm00001d008930_P003
Zm00001d009724_P009
Zm00001d011352_P001
Zm00001d033961_P001
Zm00001d039362_P002
Zm00001d044479_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G80300.1	Zm00001d004494_P001	AT2G42580.1	19000166
AT1G80300.1	Zm00001d006366_P001	AT2G42580.1	19000166
AT1G80300.1	Zm00001d008930_P003	AT2G42580.1	19000166
AT1G80300.1	Zm00001d009724_P009	AT2G42580.1	19000166
AT1G80300.1	Zm00001d011352_P001	AT2G42580.1	19000166
AT1G80300.1	Zm00001d033961_P001	AT2G42580.1	19000166
AT1G80300.1	Zm00001d039362_P002	AT2G42580.1	19000166
AT1G80300.1	Zm00001d044479_P001	AT2G42580.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra026126.1-P	Field mustard	plastid	50.0	9.03
CDY36568	Canola	mitochondrion	50.0	9.02
CDY39658	Canola	mitochondrion	50.0	8.96
CDY57697	Canola	plastid	50.0	8.93
Bra003560.1-P	Field mustard	plastid	50.0	8.93
CDX83974	Canola	plastid	49.09	8.87
Bra016656.1-P	Field mustard	plastid	49.09	8.85
CDX96838	Canola	plastid	49.09	8.82
AT1G80300.1	Thale cress	plastid	50.0	8.81
CDX79394	Canola	plastid	49.09	8.77
CDX87299	Canola	mitochondrion, plastid	48.18	8.63
Bra035190.1-P	Field mustard	mitochondrion, plastid	48.18	8.63
CDY39988	Canola	mitochondrion, plastid	48.18	8.62
AT1G15500.1	Thale cress	mitochondrion	48.18	8.58
Zm00001d011471_P001	Maize	plastid	48.18	8.36
PGSC0003DMT400014304	Potato	plastid	47.27	8.31
VIT_09s0002g05710.t01	Wine grape	plastid	46.36	8.21
Solyc03g119970.2.1	Tomato	plastid	46.36	8.16
KRH09791	Soybean	extracellular	45.45	8.1
Zm00001d044060_P001	Maize	extracellular, plasma membrane	47.27	8.0
KRH23529	Soybean	endoplasmic reticulum	44.55	7.97
Solyc12g042950.1.1	Tomato	mitochondrion, plastid	45.45	7.95
KRH47502	Soybean	mitochondrion	44.55	7.87
KRH44405	Soybean	endoplasmic reticulum	44.55	7.85
Zm00001d016411_P001	Maize	plastid	46.36	7.79
PGSC0003DMT400073724	Potato	mitochondrion, plastid	44.55	7.77
Zm00001d038035_P002	Maize	plastid	3.64	2.07
Solyc08g066920.1.1	Tomato	cytosol	1.82	1.02
HORVU7Hr1G057290.1	Barley	endoplasmic reticulum, golgi	0.0	0.0

Protein Annotations

MapMan:35.1	UniProt:A0A1D6MKD5	InterPro:ADP_ATP_car	GO:GO:0000166	GO:GO:0003674	GO:GO:0005215
GO:GO:0005471	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006810	GO:GO:0006862	GO:GO:0008150	GO:GO:0009507	GO:GO:0009536
GO:GO:0015866	GO:GO:0015867	GO:GO:0016020	GO:GO:0016021	GO:GO:0031969	ProteinID:ONM29710.1
PFAM:PF03219	PANTHER:PTHR31187	PANTHER:PTHR31187:SF3	TMHMM:TMhelix	UniParc:UPI000842E47A	EnsemblPlantsGene:Zm00001d039684
EnsemblPlants:Zm00001d039684_P001	EnsemblPlants:Zm00001d039684_T001	:	:	:	:

Description

ADPATP carrier protein 1 chloroplastic

Coordinates

chr3:+:11839625..11841440

Molecular Weight (calculated)

11880.1 Da

IEP (calculated)

4.184

GRAVY (calculated)

-0.135

Length

110 amino acids

Sequence
(BLAST)

001: MSSLGSTDVD DGNEEEDGSA STPEIYRCHS HAVACSLSMQ QDLQSDTDEE TTKITPVDEA KKLYLLFGLG ANVAIIFSGR TMKYFSNLRK TLGPGMMSIV
101: VLLELASIGE

Best Arabidopsis Sequence Match ( AT1G80300.1 )
(BLAST)

001: MEAVIQTRGL LSLPTKPIGV RSQLQPSHGL KQRLFAAKPR NLHGLSLSFN GHKKFQTFEP TLHGISISHK ERSTEFICKA EAAAAGDGAV FGEGDSAAVV
101: ASPKIFGVEV ATLKKIIPLG LMFFCILFNY TILRDTKDVL VVTAKGSSAE IIPFLKTWVN LPMAIGFMLL YTKLSNVLSK KALFYTVIVP FIIYFGAFGF
201: VMYPLSNYIH PEALADKLLT TLGPRFMGPI AILRIWSFCL FYVMAELWGS VVVSVLFWGF ANQITTVDEA KKFYPLFGLG ANVALIFSGR TVKYFSNLRK
301: NLGPGVDGWA VSLKAMMSIV VGMGLAICLL YWWVNRYVPL PTRSKNKKEK PKMGTMESLK FLVSSPYIRD LATLVVAYGI SINLVEVTWK SKLKAQFPSP
401: NEYSAFMGDF STCTGVATFT MMLLSQYVFN KYGWGVAAKI TPTVLLLTGV AFFSLILFGG PFAPLVAKLG MTPLLAAVYV GALQNIFSKS AKYSLFDPCK
501: EMAYIPLDED TKVKGKAAID VVCNPLGKSG GALIQQFMIL SFGSLANSTP YLGMILLVIV TAWLAAAKSL EGQFNSLRSE EELEKEMERA SSVKIPVVSQ
601: DESGNGSLGE SPSSSPEKSA PTNL

Arabidopsis Description

AATP1ADP,ATP carrier protein 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q39002]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.