Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d011352_P001 | Maize | cytosol | 92.36 | 92.36 |
| TraesCS3A01G221800.1 | Wheat | cytosol | 82.82 | 81.98 |
| TraesCS3B01G251600.1 | Wheat | cytosol, mitochondrion | 82.67 | 81.83 |
| TraesCS3D01G231300.1 | Wheat | cytosol, mitochondrion | 82.53 | 81.69 |
| HORVU3Hr1G054240.2 | Barley | cytosol, mitochondrion | 81.64 | 80.81 |
| GSMUA_Achr7P24480_001 | Banana | cytosol | 57.56 | 60.4 |
| GSMUA_Achr4P08560_001 | Banana | cytosol | 60.35 | 60.0 |
| VIT_18s0001g09830.t01 | Wine grape | cytosol | 22.03 | 56.82 |
| GSMUA_AchrUn_... | Banana | endoplasmic reticulum | 40.82 | 55.27 |
| Zm00001d039362_P002 | Maize | cytosol | 54.04 | 54.93 |
| Zm00001d008930_P003 | Maize | cytosol | 54.33 | 54.81 |
| KRH21985 | Soybean | cytosol | 54.77 | 53.9 |
| KRH55099 | Soybean | nucleus | 53.16 | 53.39 |
| KRH26223 | Soybean | nucleus | 52.86 | 53.25 |
| VIT_19s0014g01470.t01 | Wine grape | cytosol | 54.19 | 53.25 |
| GSMUA_Achr3P25160_001 | Banana | cytosol | 55.65 | 53.23 |
| KRH27330 | Soybean | cytosol | 53.89 | 52.58 |
| Bra038116.1-P | Field mustard | cytosol | 50.07 | 51.82 |
| CDY25865 | Canola | cytosol | 50.07 | 51.82 |
| KRH22291 | Soybean | plastid | 44.2 | 51.54 |
| CDY02514 | Canola | cytosol, plastid | 50.51 | 51.34 |
| Bra030946.1-P | Field mustard | cytosol, plastid | 50.51 | 51.34 |
| CDY25722 | Canola | cytosol, plastid | 50.22 | 51.27 |
| CDY45930 | Canola | cytosol | 49.49 | 51.14 |
| PGSC0003DMT400032362 | Potato | cytosol | 52.42 | 51.0 |
| VIT_12s0028g02240.t01 | Wine grape | cytosol | 53.16 | 50.99 |
| Solyc07g062580.2.1 | Tomato | cytosol | 52.13 | 50.64 |
| Zm00001d004494_P001 | Maize | cytosol, mitochondrion | 16.45 | 50.45 |
| GSMUA_AchrUn_... | Banana | cytosol | 19.38 | 49.25 |
| AT1G53300.1 | Thale cress | cytosol | 49.78 | 48.5 |
| Bra000267.1-P | Field mustard | cytosol | 47.43 | 48.07 |
| CDY61202 | Canola | cytosol | 47.28 | 47.99 |
| CDY51514 | Canola | cytosol | 46.84 | 47.68 |
| CDY55390 | Canola | cytosol | 46.84 | 47.68 |
| PGSC0003DMT400054803 | Potato | cytosol | 20.56 | 47.62 |
| AT3G58620.1 | Thale cress | cytosol | 47.43 | 47.36 |
| Bra004709.1-P | Field mustard | cytosol | 45.52 | 47.18 |
| CDY42827 | Canola | cytosol | 46.4 | 47.09 |
| CDX71941 | Canola | cytosol | 46.4 | 46.88 |
| Bra007405.1-P | Field mustard | cytosol | 46.26 | 46.81 |
| AT2G42580.1 | Thale cress | cytosol | 47.14 | 46.45 |
| CDY49237 | Canola | cytosol | 45.37 | 46.33 |
| PGSC0003DMT400054902 | Potato | cytosol | 19.97 | 45.48 |
| KRH27037 | Soybean | nucleus | 43.76 | 44.15 |
| Zm00001d009724_P009 | Maize | cytosol | 68.43 | 43.59 |
| PGSC0003DMT400054911 | Potato | cytosol | 32.6 | 42.61 |
| Solyc10g007240.1.1 | Tomato | cytosol | 37.0 | 42.42 |
| PGSC0003DMT400054904 | Potato | cytosol | 37.44 | 42.22 |
| CDY34224 | Canola | cytosol | 4.26 | 42.03 |
| AT3G14950.1 | Thale cress | cytosol | 44.35 | 41.37 |
| PGSC0003DMT400054796 | Potato | cytosol, plastid | 37.3 | 41.3 |
| Solyc10g007230.1.1 | Tomato | cytosol | 36.12 | 41.28 |
| Bra023795.1-P | Field mustard | cytosol | 5.29 | 40.91 |
| Solyc10g007220.1.1 | Tomato | cytosol | 29.96 | 40.4 |
| Solyc10g007420.2.1 | Tomato | cytosol | 25.11 | 40.24 |
| Bra027292.1-P | Field mustard | cytosol | 42.88 | 39.78 |
| CDX97619 | Canola | cytosol | 42.0 | 39.45 |
| CDX98517 | Canola | cytosol | 41.85 | 39.36 |
| PGSC0003DMT400054909 | Potato | cytosol | 23.35 | 38.59 |
| CDY32327 | Canola | cytosol | 41.12 | 38.41 |
| CDY20095 | Canola | nucleus | 40.82 | 38.19 |
| Solyc10g007250.1.1 | Tomato | cytosol | 15.42 | 37.63 |
| Bra021583.1-P | Field mustard | nucleus | 41.56 | 37.43 |
| CDY34222 | Canola | cytosol | 16.59 | 36.69 |
| Solyc10g007430.1.1 | Tomato | cytosol, plastid | 20.26 | 36.51 |
| CDY40820 | Canola | mitochondrion | 14.98 | 36.3 |
| PGSC0003DMT400091014 | Potato | nucleus | 32.01 | 35.91 |
| Bra023793.1-P | Field mustard | cytosol | 20.41 | 33.74 |
| CDY34223 | Canola | cytosol | 15.71 | 32.82 |
| Bra023794.1-P | Field mustard | cytosol, nucleus, plastid | 15.57 | 32.52 |
| Zm00001d052221_P002 | Maize | cytosol, nucleus, plastid | 27.46 | 31.97 |
| Zm00001d018088_P001 | Maize | cytosol | 27.46 | 31.69 |
| Zm00001d034423_P001 | Maize | cytosol | 9.1 | 25.0 |
| Zm00001d012121_P002 | Maize | cytosol | 9.1 | 24.31 |
| Zm00001d017669_P001 | Maize | cytosol | 0.44 | 1.29 |
| Zm00001d033961_P001 | Maize | cytosol | 0.44 | 1.29 |
| Zm00001d035258_P001 | Maize | cytosol | 0.44 | 1.29 |
| Zm00001d035261_P001 | Maize | cytosol | 0.44 | 1.29 |
| Zm00001d006366_P001 | Maize | cytosol | 0.44 | 1.29 |
| Zm00001d039774_P001 | Maize | cytosol | 0.44 | 1.29 |
| Zm00001d052005_P001 | Maize | cytosol | 0.44 | 1.29 |
| Zm00001d002746_P001 | Maize | cytosol | 0.44 | 1.29 |
Protein Annotations
| Gene3D:1.25.40.10 | EntrezGene:100502390 | MapMan:11.3.2.5 | Gene3D:3.40.30.10 | UniProt:A0A1D6NMA4 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0008150 | GO:GO:0009987 |
| GO:GO:0019725 | GO:GO:0045454 | InterPro:IPR011990 | InterPro:IPR013026 | InterPro:IPR013766 | InterPro:IPR019734 |
| ProteinID:ONM41311.1 | ProteinID:ONM41314.1 | PFAM:PF00085 | PFAM:PF00515 | PFAM:PF13432 | PFscan:PS50005 |
| PFscan:PS50293 | PANTHER:PTHR22904 | PANTHER:PTHR22904:SF395 | SMART:SM00028 | SUPFAM:SSF48452 | SUPFAM:SSF52833 |
| InterPro:TPR-contain_dom | InterPro:TPR-like_helical_dom_sf | InterPro:TPR_1 | InterPro:TPR_repeat | InterPro:Thioredoxin-like_sf | InterPro:Thioredoxin_domain |
| UniParc:UPI00022110DA | EnsemblPlantsGene:Zm00001d044479 | EnsemblPlants:Zm00001d044479_P001 | EnsemblPlants:Zm00001d044479_T001 | SEG:seg | : |
Description
TPR repeat-containing thioredoxin TTL1
Coordinates
chr3:+:229347693..229352021
Molecular Weight (calculated)
72649.2 Da
IEP (calculated)
8.753
GRAVY (calculated)
-0.290
Length
681 amino acids
Sequence
(BLAST)
(BLAST)
001: MSEADRIRHR TAALVLHDDE VRDKPDAKAN VFADLGSPVS PLRARASVAT SSSSSSGSAK SPAPSNAGMA GGRSHSGELV GECNPPRLMA HRRSGSGQLI
101: FSGGSSRGSG GGGGDRGSTA SSPILNALPS GNICPSGRVP ATAAPPPPRS RPDVLGSGTG HYGHGSIMRG AGMAPARSSI DSSSFLGHSS RSPASFPASS
201: GSLQEVTRLG NEWYKKGKYG EALRHYERAV ALCPESAACR GNRAAALIGL GRLADALREC EEAVRLDPAS GRGHSRVAGI CLRLGMIDKA RRHFTQAGHL
301: QQSDPTDWQK LQEVEVHLGR CTDARKIGDW KSTLREADAA IAAGADSSQL LLALRSEALL HLHKLEEAES TLASFLKLDS ALPSSLTAAE LSGMLAESYV
401: HIVRAQIDMA LGRFDAAVAA AEKARDLDPG NAEIGMVLNN VRLVAKAREQ GNDLFKAAKF SDASMAYGEG LKYDPSNSVL HCNRAACWSK LEKWEKAVDD
501: CNEALRIQPS YTKALLRRAA SYAKLERWVD CVRDYEALRK ELPSDKEVAE ALFHAQISLK ATRGEDVSNM KFGGEVEIVS SVEQLRAAIS SPGVSVVYFM
601: SAMNQQCTQI TPSVNTLCTE CPSVNFLKVN IDSSPMVAKA ENVRIVPTFK IYKGGVKVKE MICPSLHVLR YSVRHYSVSS S
101: FSGGSSRGSG GGGGDRGSTA SSPILNALPS GNICPSGRVP ATAAPPPPRS RPDVLGSGTG HYGHGSIMRG AGMAPARSSI DSSSFLGHSS RSPASFPASS
201: GSLQEVTRLG NEWYKKGKYG EALRHYERAV ALCPESAACR GNRAAALIGL GRLADALREC EEAVRLDPAS GRGHSRVAGI CLRLGMIDKA RRHFTQAGHL
301: QQSDPTDWQK LQEVEVHLGR CTDARKIGDW KSTLREADAA IAAGADSSQL LLALRSEALL HLHKLEEAES TLASFLKLDS ALPSSLTAAE LSGMLAESYV
401: HIVRAQIDMA LGRFDAAVAA AEKARDLDPG NAEIGMVLNN VRLVAKAREQ GNDLFKAAKF SDASMAYGEG LKYDPSNSVL HCNRAACWSK LEKWEKAVDD
501: CNEALRIQPS YTKALLRRAA SYAKLERWVD CVRDYEALRK ELPSDKEVAE ALFHAQISLK ATRGEDVSNM KFGGEVEIVS SVEQLRAAIS SPGVSVVYFM
601: SAMNQQCTQI TPSVNTLCTE CPSVNFLKVN IDSSPMVAKA ENVRIVPTFK IYKGGVKVKE MICPSLHVLR YSVRHYSVSS S
001: MPKSVKPISE SDKLSDHLRD SSLTSEINKP DFRELDLGSP VSPLRSQPRG LTTTTTTTTT SSSSSSSSGS VTGRIKHAPV IGRSNSVRSQ SNSSSGNNNL
101: RPRSDSATTS SSSHSQPLLS SSSSSATSPA PTSPANVLPT GNICPSGKIQ ITGMTQSRSR SDVLGSGTGT YGHGSIMRGG GISPAKPTNT GGGSNSPVNV
201: GSSSRSSSTV ATGETPIWKK AILGSDSEEV KRVGNEMYRK GLFNEALKLY DRAIALSPTN AAYRSNRAAA LIGLSRIGEA VKECEDAVRS DPNYGRAHHR
301: LALLLIRLGQ VNSARKHLCF LGRPSDPMEL QKLEAVEKHL IKCVDARRVT DWKTVLIEAD AAIVSGADFS PQLFMCKVEA FLKLHRLDDA QSKLLEVPKV
401: EPFPVSCSQT RFSGMACEAY IYFVKAQIEM ALGRFENAVM AAEKASQIDP RCNEVAMLHN TVTLVARARA RGNDLYKSER YTEASSAYAE GLRLDPCNAI
501: LYCNRAACWF KLGMWERSIE DCNQALRYQP SYTKPLLRRA ASNSKMERWG AAVSDYEALI RELPHDKEVA ESLFHAQVAL KKSRGEEVLN MEFGGEVEEI
601: YSLEQFKSAM NLPGVSVIHF STASDHQCKQ ISPFVDSLCT RYPSIHFLKV DIDKCPSIGN AENVRVVPTV KIYKNGSRVK EIVCPSKEVL EYSVRHYSG
101: RPRSDSATTS SSSHSQPLLS SSSSSATSPA PTSPANVLPT GNICPSGKIQ ITGMTQSRSR SDVLGSGTGT YGHGSIMRGG GISPAKPTNT GGGSNSPVNV
201: GSSSRSSSTV ATGETPIWKK AILGSDSEEV KRVGNEMYRK GLFNEALKLY DRAIALSPTN AAYRSNRAAA LIGLSRIGEA VKECEDAVRS DPNYGRAHHR
301: LALLLIRLGQ VNSARKHLCF LGRPSDPMEL QKLEAVEKHL IKCVDARRVT DWKTVLIEAD AAIVSGADFS PQLFMCKVEA FLKLHRLDDA QSKLLEVPKV
401: EPFPVSCSQT RFSGMACEAY IYFVKAQIEM ALGRFENAVM AAEKASQIDP RCNEVAMLHN TVTLVARARA RGNDLYKSER YTEASSAYAE GLRLDPCNAI
501: LYCNRAACWF KLGMWERSIE DCNQALRYQP SYTKPLLRRA ASNSKMERWG AAVSDYEALI RELPHDKEVA ESLFHAQVAL KKSRGEEVLN MEFGGEVEEI
601: YSLEQFKSAM NLPGVSVIHF STASDHQCKQ ISPFVDSLCT RYPSIHFLKV DIDKCPSIGN AENVRVVPTV KIYKNGSRVK EIVCPSKEVL EYSVRHYSG
Arabidopsis Description
TTL1TPR repeat-containing thioredoxin TTL1 [Source:UniProtKB/Swiss-Prot;Acc:Q9MAH1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.