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Maize
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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 3
  • endoplasmic reticulum 3
  • vacuole 3
  • plasma membrane 5
  • golgi 4
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:secretory
iPSORT:secretory
MultiLoc:golgi
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
Zm00001d004494_P001
Zm00001d006366_P001
Zm00001d008930_P003
Zm00001d009724_P009
Zm00001d011352_P001
Zm00001d033961_P001
Zm00001d039362_P002
Zm00001d044479_P001

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G69420.1 Zm00001d004494_P001 AT2G42580.1 19000166
AT1G69420.1 Zm00001d006366_P001 AT2G42580.1 19000166
AT1G69420.1 Zm00001d008930_P003 AT2G42580.1 19000166
AT1G69420.1 Zm00001d009724_P009 AT2G42580.1 19000166
AT1G69420.1 Zm00001d011352_P001 AT2G42580.1 19000166
AT1G69420.1 Zm00001d033961_P001 AT2G42580.1 19000166
AT1G69420.1 Zm00001d039362_P002 AT2G42580.1 19000166
AT1G69420.1 Zm00001d044479_P001 AT2G42580.1 19000166
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d022038_P007 Maize plasma membrane 89.85 87.25
EER99646 Sorghum plasma membrane 76.57 83.14
TraesCS2B01G209800.1 Wheat golgi 73.88 80.88
HORVU2Hr1G034630.4 Barley plasma membrane 73.88 80.88
TraesCS2D01G191000.1 Wheat plasma membrane 71.94 78.89
TraesCS2A01G183200.1 Wheat plasma membrane 71.79 78.59
GSMUA_Achr4P10850_001 Banana extracellular 3.58 72.73
Os07t0596000-01 Rice plasma membrane 26.57 71.77
HORVU3Hr1G033580.1 Barley plasma membrane 15.37 63.98
GSMUA_Achr5P16110_001 Banana plasma membrane 25.52 61.73
GSMUA_Achr10P... Banana plasma membrane 37.61 59.86
HORVU4Hr1G060520.1 Barley endoplasmic reticulum, plasma membrane, vacuole 16.27 57.67
GSMUA_Achr6P07830_001 Banana endoplasmic reticulum, golgi, plasma membrane 51.79 55.61
CDX95936 Canola plasma membrane 44.48 53.99
VIT_01s0113g00420.t01 Wine grape endoplasmic reticulum, golgi, plasma membrane 50.6 53.64
CDY40920 Canola plasma membrane 45.97 53.38
PGSC0003DMT400072839 Potato plasma membrane 49.7 52.86
KRH74943 Soybean plasma membrane 49.1 52.81
KRH70813 Soybean plasma membrane 48.81 52.32
KRG89539 Soybean endoplasmic reticulum, golgi, plasma membrane 48.06 51.77
Bra004380.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 45.82 51.42
CDY28549 Canola plasma membrane 43.73 51.31
AT1G69420.1 Thale cress plasma membrane 45.52 51.17
CDY44067 Canola plasma membrane 43.43 51.14
Solyc05g012790.2.1 Tomato plasma membrane 48.06 51.11
Bra038305.1-P Field mustard plasma membrane 43.88 49.92
Zm00001d030508_P001 Maize plasma membrane 43.43 49.83
KRH50551 Soybean plasma membrane 45.97 49.44
CDY51503 Canola plasma membrane 43.28 49.4
CDY07350 Canola plasma membrane 40.0 46.61
Bra004000.1-P Field mustard cytosol, nucleus, plasma membrane 37.61 45.82
Zm00001d028039_P004 Maize plasma membrane, plastid 50.15 43.98
GSMUA_Achr5P16100_001 Banana endoplasmic reticulum, extracellular, plasma membrane 17.01 39.72
GSMUA_Achr4P10840_001 Banana extracellular, mitochondrion, plasma membrane, plastid 14.03 39.33
CDX84493 Canola cytosol 7.01 34.06
Zm00001d031977_P001 Maize golgi 27.16 26.69
Zm00001d017871_P002 Maize plasma membrane 19.55 24.67
Zm00001d019637_P001 Maize plasma membrane 28.21 24.02
Zm00001d002534_P001 Maize cytosol 26.12 21.24
Protein Annotations
EnsemblPlants:Zm00001d006757_P003EnsemblPlants:Zm00001d006757_T003EnsemblPlantsGene:Zm00001d006757EntrezGene:100281655GO:GO:0003674GO:GO:0003824
GO:GO:0005575GO:GO:0016020GO:GO:0016021GO:GO:0016740GO:GO:0016746GO:GO:0019706
InterPro:Palmitoyltrfase_DHHCPANTHER:PTHR22883PANTHER:PTHR22883:SF119PFAM:PF01529PFscan:PS50216ProteinID:ONM24934.1
SEG:segTMHMM:TMhelixUniParc:UPI0008436384UniProt:A0A1D6F082MapMan:35.1:
Description
Metal ion binding protein
Coordinates
chr2:-:216050123..216061504
Molecular Weight (calculated)
74018.8 Da
IEP (calculated)
8.403
GRAVY (calculated)
-0.082
Length
670 amino acids
Sequence
(BLAST)
001: MRRHGWQLPY HPLQVVAVSV FLALAFAFYV FFAPFVGRNV FQYVVIGLYT PLVLCVFFLY IWCAAANPAD PGVFKSKKYL SLYGSGKHRH LKECRKGSSD
101: VRLQLEGTGE KQEHEVAASS EMSMTQYKDN IPSCMSSTFS AFLLLFYPLS FVLSCCQSHE WSSEQQATEE GMFFCSLCEV QVLKYSKHCR VCDKCVDGFD
201: HHCRWLNNCI GRRNYGRFFI LMSTALILIV LIKMLQSLHG LCNLGQLILQ SATGVLVLVL CFVERKEFCL QIVSKLGSSF SVVPFVIVVA SCTILAMVAS
301: LPIAQLLFFH ILLIKKASSD TFPFCLILLL TESCKKSYVK LKHHNDNLMQ GISTYDYIIA LREQEQDDLS GQQSPQMSRV SSYTGLSSTS SFGPLRRGSW
401: CTPPRLFLED QFDVIPSEAA SSHNSAMKRK EDEGKRKKGS GAVQISPWAL ARLNAEEVSR VAAEARKKSK VLLPIRKDDY SRDHETDSSY GGMSNGRIDL
501: GTDSKRRTNR RGRQPSDLSL KPVAKISTDV IDSTSRDMAP EALSNLAPLQ LEALSAFHPS RAASCVNAGG SSPDSSLDSP DLHLYRVSAV SSSGAEDLQL
601: TALTAPGSTP QQGIQLSRST SDGYEASGGE DSDRIPSRIV HRSSNWASII LNSDQSASSS GILVPKNRLS
Best Arabidopsis Sequence Match ( AT1G69420.1 )
(BLAST)
001: MRKHGWQLPY HPLQVVAVAV FLALGFAFYV FFAPFVGKKI HQYIAMGIYT PLITCVVGLY IWCAASDPAD RGVFRSKKYL KIPENGKFPL AKDIKDGCGS
101: ATGGAKSHDG TCVEDTENGS NKKLESSERS SLLRLLCSPC ALLCSCCSGK DESSEQMSED GMFYCSLCEV EVFKYSKHCR VCDKCVDRFD HHCRWLNNCI
201: GKRNYRKFFS LMVSAIFLLI MQWSTGIFVL VLCLLRRNQF NADIALKLGS SFSLIPFVIV VGVCTVLAML ATLPLAQLFF FHILLIKKGI STYDYIVALR
301: EQEQELEAGG GQQSPQMSMI SSFTGLSSAS SFNTFHRGAW CTPPRLFLED QFDVVPPENA SVSSYGKKSV VEERVKKKPQ PVKISPWTLA RLNAEEVSKA
401: AAEARKKSKI IQPVARRENP FVGLEASSSF GSSGRRMFPT KYEGVNNNGK QRRQSKRIRL PAELPLEPLM NVQTKAAMET STSSGLAPLQ LEARSAFQTS
501: RAMSGSGNVM VTSSPESSLD SHDIHPFRVS SEAEDAAQLN GFSSAVGLMG QQRGQQQQQQ LSMMMMPLSR STSDGYDASG GEDSDQVPSR NIHKSR
Arabidopsis Description
PAT22S-acyltransferase [Source:UniProtKB/TrEMBL;Acc:A0A178WF77]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.