Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 4
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 6
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G69420.1 | CDY42827 | AT2G42580.1 | 19000166 |
| AT1G69420.1 | CDY51514 | AT2G42580.1 | 19000166 |
| AT1G69420.1 | CDY55390 | AT2G42580.1 | 19000166 |
| AT1G69420.1 | CDY61202 | AT2G42580.1 | 19000166 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY44067 | Canola | plasma membrane | 83.33 | 80.84 |
| CDY40920 | Canola | plasma membrane | 83.88 | 80.24 |
| CDY28549 | Canola | plasma membrane | 82.97 | 80.21 |
| Bra004380.1-P | Field mustard | endoplasmic reticulum, plasma membrane, vacuole | 85.69 | 79.23 |
| GSMUA_Achr4P10850_001 | Banana | extracellular | 4.53 | 75.76 |
| AT1G69420.1 | Thale cress | plasma membrane | 80.43 | 74.5 |
| CDY51503 | Canola | plasma membrane | 75.54 | 71.04 |
| CDY07350 | Canola | plasma membrane | 70.11 | 67.3 |
| GSMUA_Achr10P... | Banana | plasma membrane | 47.64 | 62.47 |
| GSMUA_Achr5P16110_001 | Banana | plasma membrane | 29.71 | 59.21 |
| CDX74717 | Canola | golgi, plasma membrane | 9.6 | 58.89 |
| KRH74943 | Soybean | plasma membrane | 66.3 | 58.75 |
| KRH70813 | Soybean | plasma membrane | 65.94 | 58.24 |
| VIT_01s0113g00420.t01 | Wine grape | endoplasmic reticulum, golgi, plasma membrane | 65.4 | 57.12 |
| Solyc05g012790.2.1 | Tomato | plasma membrane | 64.31 | 56.35 |
| PGSC0003DMT400072839 | Potato | plasma membrane | 64.13 | 56.19 |
| HORVU3Hr1G033580.1 | Barley | plasma membrane | 16.3 | 55.9 |
| KRG89539 | Soybean | endoplasmic reticulum, golgi, plasma membrane | 61.41 | 54.5 |
| KRH50551 | Soybean | plasma membrane | 59.6 | 52.81 |
| GSMUA_Achr6P07830_001 | Banana | endoplasmic reticulum, golgi, plasma membrane | 59.6 | 52.72 |
| TraesCS4B01G252500.1 | Wheat | plasma membrane | 55.43 | 52.31 |
| TraesCS4D01G252800.1 | Wheat | plasma membrane | 55.07 | 51.88 |
| Os03t0209500-01 | Rice | endoplasmic reticulum, golgi, plasma membrane | 55.98 | 51.67 |
| TraesCS4A01G051700.1 | Wheat | plasma membrane | 54.71 | 51.54 |
| Os07t0596000-01 | Rice | plasma membrane | 22.64 | 50.4 |
| HORVU4Hr1G060520.1 | Barley | endoplasmic reticulum, plasma membrane, vacuole | 17.21 | 50.26 |
| CDX84493 | Canola | cytosol | 12.5 | 50.0 |
| TraesCS2A01G183200.1 | Wheat | plasma membrane | 55.43 | 50.0 |
| TraesCS2D01G191000.1 | Wheat | plasma membrane | 55.25 | 49.92 |
| Os10t0337500-01 | Rice | plasma membrane | 53.8 | 49.83 |
| TraesCS2B01G209800.1 | Wheat | golgi | 54.89 | 49.51 |
| KXG39903 | Sorghum | plasma membrane | 53.62 | 48.93 |
| HORVU2Hr1G034630.4 | Barley | plasma membrane | 54.17 | 48.86 |
| EER99646 | Sorghum | plasma membrane | 54.35 | 48.62 |
| Zm00001d030508_P001 | Maize | plasma membrane | 49.09 | 46.4 |
| Zm00001d006757_P003 | Maize | plasma membrane | 53.99 | 44.48 |
| Zm00001d022038_P007 | Maize | plasma membrane | 55.07 | 44.06 |
| HORVU4Hr1G069190.5 | Barley | cytosol, peroxisome | 54.71 | 42.66 |
| Zm00001d028039_P004 | Maize | plasma membrane, plastid | 52.9 | 38.22 |
| GSMUA_Achr4P10840_001 | Banana | extracellular, mitochondrion, plasma membrane, plastid | 15.22 | 35.15 |
| CDY37703 | Canola | plasma membrane | 30.8 | 34.98 |
| GSMUA_Achr5P16100_001 | Banana | endoplasmic reticulum, extracellular, plasma membrane | 17.39 | 33.45 |
| CDY23719 | Canola | plasma membrane | 30.8 | 30.97 |
| CDY47797 | Canola | plasma membrane | 32.25 | 27.47 |
| CDY39504 | Canola | endoplasmic reticulum, golgi, plasma membrane | 29.71 | 26.03 |
| CDY01925 | Canola | golgi | 23.91 | 25.93 |
| CDX97254 | Canola | plasma membrane | 23.91 | 25.93 |
| CDY58751 | Canola | endoplasmic reticulum, golgi, plasma membrane | 29.89 | 25.62 |
| CDY22939 | Canola | golgi | 31.7 | 23.52 |
Protein Annotations
| EnsemblPlants:CDX95936 | EnsemblPlantsGene:GSBRNA2T00101950001 | GO:A0A078E3J8 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0016740 |
| GO:GO:0019706 | InterPro:Palmitoyltrfase_DHHC | KEGG:00561+2.3.1.22 | MetaCyc:PWY-7420 | PANTHER:PTHR22883 | PANTHER:PTHR22883:SF119 |
| PFAM:PF01529 | PFscan:PS50216 | ProteinID:CDX95936 | ProteinID:CDX95936.1 | SEG:seg | TMHMM:TMhelix |
| UniParc:UPI0004EE3CAB | MapMan:35.1 | : | : | : | : |
Description
BnaA07g27950D
Coordinates
chrLK031892:-:163957..167359
Molecular Weight (calculated)
61161.8 Da
IEP (calculated)
8.809
GRAVY (calculated)
-0.141
Length
552 amino acids
Sequence
(BLAST)
(BLAST)
001: MRKHGWQLPY HPLQVVAVAV FLALGFAFYV FFAPFVGSKI HQYIAMGIYT PLITCVVGLY IWCAASDPAD RGVFRSKKYL KVPENGKLPQ SKGSKDGCGG
101: AKSHDSTCVQ DQENGTNTKK LDSSQRSCFL RVLCSPCALI CGCCSGRDES SEQQMSEDGM FYCSLCEVEV YKYSKHCRVC DKCVDRFDHH CRWLNNCIGK
201: RNYRKFFSLM ISAIFLLIMQ WSTGIFVLVL CVLRKNQFSA EIALKLGSSF SLVPFVIVVA VCTLLAMLAT LPLAQLFFFH ILLIKKGIST YDYIVALREQ
301: EQELEAGGGQ QSPQMSMISS FTGLSSASSF NTFHRGAWCT PPRLFLEDQF DVVPPENASV SSYGKKSVVE ERVKKKNQPV KISPWTLARL NAEEVSKAAA
401: EARKKSKIIK PVARRENPFH QRRQSKRIRL PAELPLEPLM NVQTRAAIME TSTSSGLGPL QLEARSAFQT SRAMSGSGGG VMVTSSPESS LDSHDIQPFR
501: VSSEAEDSAQ LNGFSSASMM MMPLSRSTSD GYDASGGEDS DQVPSRNIHK SR
101: AKSHDSTCVQ DQENGTNTKK LDSSQRSCFL RVLCSPCALI CGCCSGRDES SEQQMSEDGM FYCSLCEVEV YKYSKHCRVC DKCVDRFDHH CRWLNNCIGK
201: RNYRKFFSLM ISAIFLLIMQ WSTGIFVLVL CVLRKNQFSA EIALKLGSSF SLVPFVIVVA VCTLLAMLAT LPLAQLFFFH ILLIKKGIST YDYIVALREQ
301: EQELEAGGGQ QSPQMSMISS FTGLSSASSF NTFHRGAWCT PPRLFLEDQF DVVPPENASV SSYGKKSVVE ERVKKKNQPV KISPWTLARL NAEEVSKAAA
401: EARKKSKIIK PVARRENPFH QRRQSKRIRL PAELPLEPLM NVQTRAAIME TSTSSGLGPL QLEARSAFQT SRAMSGSGGG VMVTSSPESS LDSHDIQPFR
501: VSSEAEDSAQ LNGFSSASMM MMPLSRSTSD GYDASGGEDS DQVPSRNIHK SR
001: MRKHGWQLPY HPLQVVAVAV FLALGFAFYV FFAPFVGKKI HQYIAMGIYT PLITCVVGLY IWCAASDPAD RGVFRSKKYL KIPENGKFPL AKDIKDGCGS
101: ATGGAKSHDG TCVEDTENGS NKKLESSERS SLLRLLCSPC ALLCSCCSGK DESSEQMSED GMFYCSLCEV EVFKYSKHCR VCDKCVDRFD HHCRWLNNCI
201: GKRNYRKFFS LMVSAIFLLI MQWSTGIFVL VLCLLRRNQF NADIALKLGS SFSLIPFVIV VGVCTVLAML ATLPLAQLFF FHILLIKKGI STYDYIVALR
301: EQEQELEAGG GQQSPQMSMI SSFTGLSSAS SFNTFHRGAW CTPPRLFLED QFDVVPPENA SVSSYGKKSV VEERVKKKPQ PVKISPWTLA RLNAEEVSKA
401: AAEARKKSKI IQPVARRENP FVGLEASSSF GSSGRRMFPT KYEGVNNNGK QRRQSKRIRL PAELPLEPLM NVQTKAAMET STSSGLAPLQ LEARSAFQTS
501: RAMSGSGNVM VTSSPESSLD SHDIHPFRVS SEAEDAAQLN GFSSAVGLMG QQRGQQQQQQ LSMMMMPLSR STSDGYDASG GEDSDQVPSR NIHKSR
101: ATGGAKSHDG TCVEDTENGS NKKLESSERS SLLRLLCSPC ALLCSCCSGK DESSEQMSED GMFYCSLCEV EVFKYSKHCR VCDKCVDRFD HHCRWLNNCI
201: GKRNYRKFFS LMVSAIFLLI MQWSTGIFVL VLCLLRRNQF NADIALKLGS SFSLIPFVIV VGVCTVLAML ATLPLAQLFF FHILLIKKGI STYDYIVALR
301: EQEQELEAGG GQQSPQMSMI SSFTGLSSAS SFNTFHRGAW CTPPRLFLED QFDVVPPENA SVSSYGKKSV VEERVKKKPQ PVKISPWTLA RLNAEEVSKA
401: AAEARKKSKI IQPVARRENP FVGLEASSSF GSSGRRMFPT KYEGVNNNGK QRRQSKRIRL PAELPLEPLM NVQTKAAMET STSSGLAPLQ LEARSAFQTS
501: RAMSGSGNVM VTSSPESSLD SHDIHPFRVS SEAEDAAQLN GFSSAVGLMG QQRGQQQQQQ LSMMMMPLSR STSDGYDASG GEDSDQVPSR NIHKSR
Arabidopsis Description
PAT22S-acyltransferase [Source:UniProtKB/TrEMBL;Acc:A0A178WF77]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.