CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

plastid 1
mitochondrion 2
golgi 4
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	golgi
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX97254	Canola	plasma membrane	89.59	89.59
AT4G01730.1	Thale cress	plasma membrane	80.16	80.31
VIT_07s0005g02580.t01	Wine grape	endoplasmic reticulum, golgi, plasma membrane	52.06	60.36
KRH33653	Soybean	endoplasmic reticulum, golgi, plasma membrane	59.73	59.84
GSMUA_Achr1P19020_001	Banana	plasma membrane	52.65	56.3
Solyc01g079100.2.1	Tomato	endoplasmic reticulum, golgi, plasma membrane	52.85	51.63
PGSC0003DMT400002869	Potato	endoplasmic reticulum, golgi, plasma membrane	51.67	50.48
Os12t0263100-01	Rice	plasma membrane	49.9	48.2
TraesCS7D01G352800.1	Wheat	golgi	48.33	47.67
Zm00001d017871_P002	Maize	plasma membrane	47.94	45.95
TraesCS7B01G258200.1	Wheat	golgi	46.56	45.93
TraesCS7A01G370300.1	Wheat	golgi	46.37	44.36
KXG30910	Sorghum	peroxisome	47.54	43.76
HORVU7Hr1G085240.2	Barley	peroxisome	46.95	41.71
CDX74717	Canola	golgi, plasma membrane	4.91	27.78
CDX84493	Canola	cytosol	7.47	27.54
CDY37703	Canola	plasma membrane	24.56	25.72
CDX95936	Canola	plasma membrane	25.93	23.91
CDY40920	Canola	plasma membrane	25.93	22.88
CDY44067	Canola	plasma membrane	25.34	22.67
CDY28549	Canola	plasma membrane	25.15	22.42
CDY23719	Canola	plasma membrane	23.97	22.22
CDY07350	Canola	plasma membrane	24.36	21.57
CDY47797	Canola	plasma membrane	26.92	21.14
CDY39504	Canola	endoplasmic reticulum, golgi, plasma membrane	25.34	20.48
CDY51503	Canola	plasma membrane	23.58	20.44
CDY58751	Canola	endoplasmic reticulum, golgi, plasma membrane	25.15	19.88
CDY22939	Canola	golgi	25.93	17.74

Protein Annotations

EnsemblPlants:CDY01925	EnsemblPlantsGene:GSBRNA2T00113142001	GO:A0A078EIN3	GO:GO:0003674	GO:GO:0003824	GO:GO:0016740
GO:GO:0019706	InterPro:Palmitoyltrfase_DHHC	KEGG:00561+2.3.1.22	MetaCyc:PWY-7420	PANTHER:PTHR22883	PANTHER:PTHR22883:SF53
PFAM:PF01529	PFscan:PS50216	ProteinID:CDY01925	ProteinID:CDY01925.1	SEG:seg	TMHMM:TMhelix
UniParc:UPI0004EDFA4D	MapMan:35.1	:	:	:	:

Description

BnaC02g28020D

Coordinates

chrLK031930:-:188326..190537

Molecular Weight (calculated)

57857.5 Da

IEP (calculated)

10.267

GRAVY (calculated)

-0.197

Length

509 amino acids

Sequence
(BLAST)

001: MTRRRHGWQR PFHTLQIVGA VIFSVLVASF YVFLGFFLGN RIAIITLLSL FSFVAGSVIA LFVRCTAIDP TDKTSAKKRR RAKSKGVLMK LRVKVVLSQV
101: VVRFFRRLER KILRNFIRRT YLDPWKSSVQ LEPLLPFPLV MKDDAVTPDP KEDEDDISYC SLCDLEVKRS SKHCRTCNRC VEGFDHHCSW LNNCVGKRNY
201: TTFILLMVFV LLMLMIEGGS AVAVFVRCFV DKKGVETELK RRLHVEFPRW VLATISVMLV LLTAYGSAAM GQLFLFHVVL IRKGIRTYDY ILAMREENQF
301: TQVDPFDELD SSSDESSDFD SPERPRQTLI SKFMCSKTNE NHQKRLSIKV EGDGRSPSST LTNKKPGFHV TINPWKLITL SSEKALQAAE KARERLRKTK
401: PVSESGEDSL KPLPLETKFG LLLDPDNNNS VLEPSIPGAV KLHVSPGKFS SPRRRFSGSS STTVPSPKQK YRSNFDLKLT EVSKELESYI SRQVLCSVIK
501: QDGSEASPR

Best Arabidopsis Sequence Match ( AT4G01730.1 )
(BLAST)

001: MTRRRHGWQR PLHPLQIVGA VIYSVLVAAF YVFLGFFLGN RIAVIALLSV FSSVAVSVIV LFVRCTAIDP TDKTSAKKKR KDKSKGVLMK LRVKVVLSQV
101: VVRFFRRLER KILRNFLRRT YLDPWKSSVQ LEPLLPFPLV MKDDDSVTPD PKEEDDISYC SLCDLEVKRS SKHCRTCNRC VEGFDHHCRW LNNCVGKKNY
201: TTFILLMVFV LLMLIIEGGT ALAVFVRCFV DKKGMEMELK RRLYVEFPQW ALATISIILV LFTAYGSAAM GQLFLFHVVL IRKGMRTYDY ILAMKEENQF
301: TEVDPFDELD SSSDESSDFD SPERLRPTFI SKFMCRKANE NQQRLSIKIE GDEQSPSSTL INKKPGFHVS INPWKLITLS SEKALQAAEK AKERLRKTKP
401: VSGTEENSLK PLPLETKFGL LLDPDNNNTV LQPSTTAAVK LQVSPGRFSS PRRRFSGSSS STVPSPKQKY RTNFDLKLTE VSRELESYIS RQVLCSVIKQ
501: DGSEASPR

Arabidopsis Description

PAT18Protein S-acyltransferase 18 [Source:UniProtKB/Swiss-Prot;Acc:Q9M115]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.