Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 4
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 6
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G69420.1 | CDY42827 | AT2G42580.1 | 19000166 |
| AT1G69420.1 | CDY51514 | AT2G42580.1 | 19000166 |
| AT1G69420.1 | CDY55390 | AT2G42580.1 | 19000166 |
| AT1G69420.1 | CDY61202 | AT2G42580.1 | 19000166 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX95936 | Canola | plasma membrane | 80.24 | 83.88 |
| AT1G69420.1 | Thale cress | plasma membrane | 84.92 | 82.21 |
| CDY28549 | Canola | plasma membrane | 76.6 | 77.41 |
| CDY44067 | Canola | plasma membrane | 75.91 | 76.98 |
| CDY51503 | Canola | plasma membrane | 77.64 | 76.32 |
| GSMUA_Achr4P10850_001 | Banana | extracellular | 4.33 | 75.76 |
| CDY07350 | Canola | plasma membrane | 65.34 | 65.57 |
| GSMUA_Achr10P... | Banana | plasma membrane | 45.75 | 62.71 |
| GSMUA_Achr5P16110_001 | Banana | plasma membrane | 29.46 | 61.37 |
| VIT_01s0113g00420.t01 | Wine grape | endoplasmic reticulum, golgi, plasma membrane | 66.03 | 60.28 |
| KRH74943 | Soybean | plasma membrane | 63.95 | 59.23 |
| CDX74717 | Canola | golgi, plasma membrane | 9.19 | 58.89 |
| KRH70813 | Soybean | plasma membrane | 63.6 | 58.72 |
| PGSC0003DMT400072839 | Potato | plasma membrane | 63.26 | 57.94 |
| Solyc05g012790.2.1 | Tomato | plasma membrane | 61.01 | 55.87 |
| KRG89539 | Soybean | endoplasmic reticulum, golgi, plasma membrane | 60.14 | 55.79 |
| KRH50551 | Soybean | plasma membrane | 57.37 | 53.13 |
| HORVU3Hr1G033580.1 | Barley | plasma membrane | 14.73 | 52.8 |
| TraesCS4B01G252500.1 | Wheat | plasma membrane | 52.86 | 52.14 |
| GSMUA_Achr6P07830_001 | Banana | endoplasmic reticulum, golgi, plasma membrane | 56.33 | 52.08 |
| Os03t0209500-01 | Rice | endoplasmic reticulum, golgi, plasma membrane | 53.73 | 51.84 |
| TraesCS2B01G209800.1 | Wheat | golgi | 54.59 | 51.47 |
| Os07t0596000-01 | Rice | plasma membrane | 22.01 | 51.21 |
| TraesCS4A01G051700.1 | Wheat | plasma membrane | 51.99 | 51.19 |
| HORVU2Hr1G034630.4 | Barley | plasma membrane | 54.25 | 51.14 |
| TraesCS4D01G252800.1 | Wheat | plasma membrane | 51.65 | 50.85 |
| TraesCS2A01G183200.1 | Wheat | plasma membrane | 53.9 | 50.82 |
| TraesCS2D01G191000.1 | Wheat | plasma membrane | 53.55 | 50.57 |
| Os10t0337500-01 | Rice | plasma membrane | 51.99 | 50.34 |
| KXG39903 | Sorghum | plasma membrane | 50.95 | 48.59 |
| HORVU4Hr1G060520.1 | Barley | endoplasmic reticulum, plasma membrane, vacuole | 15.77 | 48.15 |
| EER99646 | Sorghum | plasma membrane | 51.47 | 48.14 |
| Zm00001d030508_P001 | Maize | plasma membrane | 47.31 | 46.75 |
| CDX84493 | Canola | cytosol | 11.09 | 46.38 |
| Zm00001d006757_P003 | Maize | plasma membrane | 53.38 | 45.97 |
| Zm00001d022038_P007 | Maize | plasma membrane | 54.94 | 45.94 |
| HORVU4Hr1G069190.5 | Barley | cytosol, peroxisome | 52.69 | 42.94 |
| Zm00001d028039_P004 | Maize | plasma membrane, plastid | 51.65 | 39.01 |
| GSMUA_Achr4P10840_001 | Banana | extracellular, mitochondrion, plasma membrane, plastid | 15.08 | 36.4 |
| CDY37703 | Canola | plasma membrane | 29.29 | 34.77 |
| GSMUA_Achr5P16100_001 | Banana | endoplasmic reticulum, extracellular, plasma membrane | 16.46 | 33.1 |
| CDY23719 | Canola | plasma membrane | 29.29 | 30.78 |
| CDY47797 | Canola | plasma membrane | 31.89 | 28.4 |
| CDY58751 | Canola | endoplasmic reticulum, golgi, plasma membrane | 29.81 | 26.71 |
| CDY01925 | Canola | golgi | 22.88 | 25.93 |
| CDY39504 | Canola | endoplasmic reticulum, golgi, plasma membrane | 27.9 | 25.56 |
| CDX97254 | Canola | plasma membrane | 22.53 | 25.54 |
| CDY22939 | Canola | golgi | 31.54 | 24.46 |
Protein Annotations
| KEGG:00561+2.3.1.22 | MapMan:35.1 | GO:A0A078HQN2 | UniProt:A0A078HQN2 | EnsemblPlants:CDY40920 | ProteinID:CDY40920 |
| ProteinID:CDY40920.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0016740 | GO:GO:0016746 | GO:GO:0019706 | EnsemblPlantsGene:GSBRNA2T00071970001 | PFAM:PF01529 | PFscan:PS50216 |
| PANTHER:PTHR22883 | PANTHER:PTHR22883:SF119 | MetaCyc:PWY-7420 | InterPro:Palmitoyltrfase_DHHC | TMHMM:TMhelix | UniParc:UPI0004EEAE91 |
| SEG:seg | : | : | : | : | : |
Description
BnaC06g30580DS-acyltransferase [Source:UniProtKB/TrEMBL;Acc:A0A078HQN2]
Coordinates
chrLK032484:+:131776..135276
Molecular Weight (calculated)
63447.4 Da
IEP (calculated)
8.816
GRAVY (calculated)
-0.117
Length
577 amino acids
Sequence
(BLAST)
(BLAST)
001: MRKHGWQLPY HPLQVVAVAV FLALGFAFYV FFAPFVGSKI HQYIAMGIYT PLITCVVGLY IWCAASDPAD RGVFRSKKYL KVPENGKFPQ SKGSKDGCGG
101: SALGGGAKSH DSTCVQDQEN GTNKKLESSQ RSCLLRVLCS PCALICGCCS GRDESSEQQM SEDGMFFCSL CEVEVFKYSK HCRVCDKCVD RFDHHCRWLN
201: NCIGKRNYRK FFSLMISAIL LLIMQWSTGI FVLVLCVLRK NQFSAEIALK LGSSFSLVPF VIVVAVCTLL AMLATLPLAQ LFFFHILLIK KGISTYDYIV
301: ALREQEQELE AGGGQQSPQM SMISSFTGLS SASSFNTFHR GAWCTPPRLF LEDQFDVVPP ENASVSSYGK KSVVEERVKK KNQPVKISPW TLARLNAEEV
401: SKAAAEARKK SKIIKPVARR ENPFVGLEAS SSFGSSAVNS SNWKHQRRQS KRIRLPAELP LEPLMNVQTR AAIMETSTSS GLGPLQLEAR SAFQTSRAMS
501: GSGGGVMVTS SPESSLDSHD IQPFRVSSEA EDSAQLNGFS SASMMMMPLS RSTSDGYDAS GGEDSDQVPS RNIHKSR
101: SALGGGAKSH DSTCVQDQEN GTNKKLESSQ RSCLLRVLCS PCALICGCCS GRDESSEQQM SEDGMFFCSL CEVEVFKYSK HCRVCDKCVD RFDHHCRWLN
201: NCIGKRNYRK FFSLMISAIL LLIMQWSTGI FVLVLCVLRK NQFSAEIALK LGSSFSLVPF VIVVAVCTLL AMLATLPLAQ LFFFHILLIK KGISTYDYIV
301: ALREQEQELE AGGGQQSPQM SMISSFTGLS SASSFNTFHR GAWCTPPRLF LEDQFDVVPP ENASVSSYGK KSVVEERVKK KNQPVKISPW TLARLNAEEV
401: SKAAAEARKK SKIIKPVARR ENPFVGLEAS SSFGSSAVNS SNWKHQRRQS KRIRLPAELP LEPLMNVQTR AAIMETSTSS GLGPLQLEAR SAFQTSRAMS
501: GSGGGVMVTS SPESSLDSHD IQPFRVSSEA EDSAQLNGFS SASMMMMPLS RSTSDGYDAS GGEDSDQVPS RNIHKSR
001: MRKHGWQLPY HPLQVVAVAV FLALGFAFYV FFAPFVGKKI HQYIAMGIYT PLITCVVGLY IWCAASDPAD RGVFRSKKYL KIPENGKFPL AKDIKDGCGS
101: ATGGAKSHDG TCVEDTENGS NKKLESSERS SLLRLLCSPC ALLCSCCSGK DESSEQMSED GMFYCSLCEV EVFKYSKHCR VCDKCVDRFD HHCRWLNNCI
201: GKRNYRKFFS LMVSAIFLLI MQWSTGIFVL VLCLLRRNQF NADIALKLGS SFSLIPFVIV VGVCTVLAML ATLPLAQLFF FHILLIKKGI STYDYIVALR
301: EQEQELEAGG GQQSPQMSMI SSFTGLSSAS SFNTFHRGAW CTPPRLFLED QFDVVPPENA SVSSYGKKSV VEERVKKKPQ PVKISPWTLA RLNAEEVSKA
401: AAEARKKSKI IQPVARRENP FVGLEASSSF GSSGRRMFPT KYEGVNNNGK QRRQSKRIRL PAELPLEPLM NVQTKAAMET STSSGLAPLQ LEARSAFQTS
501: RAMSGSGNVM VTSSPESSLD SHDIHPFRVS SEAEDAAQLN GFSSAVGLMG QQRGQQQQQQ LSMMMMPLSR STSDGYDASG GEDSDQVPSR NIHKSR
101: ATGGAKSHDG TCVEDTENGS NKKLESSERS SLLRLLCSPC ALLCSCCSGK DESSEQMSED GMFYCSLCEV EVFKYSKHCR VCDKCVDRFD HHCRWLNNCI
201: GKRNYRKFFS LMVSAIFLLI MQWSTGIFVL VLCLLRRNQF NADIALKLGS SFSLIPFVIV VGVCTVLAML ATLPLAQLFF FHILLIKKGI STYDYIVALR
301: EQEQELEAGG GQQSPQMSMI SSFTGLSSAS SFNTFHRGAW CTPPRLFLED QFDVVPPENA SVSSYGKKSV VEERVKKKPQ PVKISPWTLA RLNAEEVSKA
401: AAEARKKSKI IQPVARRENP FVGLEASSSF GSSGRRMFPT KYEGVNNNGK QRRQSKRIRL PAELPLEPLM NVQTKAAMET STSSGLAPLQ LEARSAFQTS
501: RAMSGSGNVM VTSSPESSLD SHDIHPFRVS SEAEDAAQLN GFSSAVGLMG QQRGQQQQQQ LSMMMMPLSR STSDGYDASG GEDSDQVPSR NIHKSR
Arabidopsis Description
PAT22S-acyltransferase [Source:UniProtKB/TrEMBL;Acc:A0A178WF77]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.