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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, golgi, plasma membrane

Predictor Summary:
  • nucleus 1
  • extracellular 3
  • endoplasmic reticulum 4
  • vacuole 3
  • plasma membrane 4
  • golgi 4
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, golgi, plasma membrane
Any Predictor:nucleus, secretory
BaCelLo:nucleus
iPSORT:secretory
MultiLoc:endoplasmic reticulum
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra023847.1-P Field mustard plasma membrane 87.14 81.58
CDY58751 Canola endoplasmic reticulum, golgi, plasma membrane 73.02 71.43
AT3G22180.1 Thale cress plasma membrane 63.17 56.37
CDY47797 Canola plasma membrane 54.76 53.24
GSMUA_Achr8P33480_001 Banana endoplasmic reticulum, golgi, plasma membrane 42.54 46.85
GSMUA_Achr11P... Banana golgi 43.02 46.8
GSMUA_Achr7P03550_001 Banana golgi 41.59 46.54
CDY22939 Canola golgi 53.49 45.3
VIT_03s0017g01770.t01 Wine grape plasma membrane 50.95 43.5
Solyc05g016030.2.1 Tomato endoplasmic reticulum, golgi, plasma membrane 49.37 43.19
KRH24108 Soybean plasma membrane 50.48 43.03
KRH29083 Soybean plasma membrane 49.37 42.26
CDY37703 Canola plasma membrane 30.32 39.3
TraesCS7D01G277000.2 Wheat golgi 40.63 39.14
TraesCS7B01G174700.1 Wheat golgi 40.0 38.65
CDY23719 Canola plasma membrane 33.65 38.62
TraesCS5B01G368600.1 Wheat plasma membrane 41.59 38.03
Os09t0563250-01 Rice plasma membrane 42.22 38.0
KXG35088 Sorghum golgi 42.7 37.94
TraesCS7A01G277000.1 Wheat golgi 39.21 37.88
Zm00001d031977_P001 Maize golgi 40.79 37.68
KXG25411 Sorghum golgi 41.75 37.57
TraesCS5A01G366200.1 Wheat plasma membrane 40.95 37.45
TraesCS5D01G375800.1 Wheat plasma membrane 40.79 37.3
HORVU5Hr1G090020.3 Barley endoplasmic reticulum, plasma membrane 41.11 36.84
HORVU7Hr1G058360.1 Barley nucleus, peroxisome 39.84 35.35
Zm00001d019637_P001 Maize plasma membrane 41.59 33.29
CDX74717 Canola golgi, plasma membrane 4.44 31.11
CDX84493 Canola cytosol 6.51 29.71
CDX95936 Canola plasma membrane 26.03 29.71
CDY28549 Canola plasma membrane 26.03 28.72
CDY44067 Canola plasma membrane 25.71 28.47
CDY40920 Canola plasma membrane 25.56 27.9
CDY51503 Canola plasma membrane 25.08 26.92
CDY07350 Canola plasma membrane 23.97 26.26
CDY01925 Canola golgi 20.48 25.34
CDX97254 Canola plasma membrane 20.16 24.95
Protein Annotations
KEGG:00561+2.3.1.22MapMan:35.1GO:A0A078HQ69UniProt:A0A078HQ69EnsemblPlants:CDY39504ProteinID:CDY39504
ProteinID:CDY39504.1GO:GO:0003674GO:GO:0003824GO:GO:0005575GO:GO:0016020GO:GO:0016021
GO:GO:0016740GO:GO:0016746GO:GO:0019706EnsemblPlantsGene:GSBRNA2T00068020001PFAM:PF01529PFscan:PS50216
PANTHER:PTHR22883PANTHER:PTHR22883:SF15MetaCyc:PWY-7420InterPro:Palmitoyltrfase_DHHCTMHMM:TMhelixUniParc:UPI0004EDE00E
SEG:seg:::::
Description
BnaA01g24840DS-acyltransferase [Source:UniProtKB/TrEMBL;Acc:A0A078HQ69]
Coordinates
chrLK032449:+:254748..257436
Molecular Weight (calculated)
69654.2 Da
IEP (calculated)
8.756
GRAVY (calculated)
-0.188
Length
630 amino acids
Sequence
(BLAST)
001: MVRRHGWQLP ADIPQMIAVT VFCLLVVAYF AFFAPFAGGR FWEYVLIGVY SPVALLVFVL YVRCTAINPA DPRIMTHPLS ARDISRSFNE SGSQLQSCPS
101: GVSMSSTFAA NSSVVRGSVG DDERVEDSVT RKSCYNPLAI FCCVFVLDDC WKQEEEQGNS RVGLYCMFCN CEVHKSSKHC KSCDKCVVRF DHHCKWLNNC
201: VGRKNYMTFV SLITASLVWL IIEAAVGVAV IVRVFADKKR METEIVNRLG SSFSRAPLAA VVGVCTVVTI PACYHLAQLL FFHTLLIKKG LTTYDYLLAI
301: RAMSEAPAGA SVDEEIQSVL YSPTGSAISG GSSLGPSYRK GVWCSPPRVF DNQDEVIPQL GSHMVPSTVD PERGIKAPKR SVKRSAWKLA KLDANEAARA
401: AARARASSSV MRPIHNHPHL PDHELSSVST DANVAARKEM RNNDLKPSHS RNSFAAPSQS SRDEYDDESV TLAPLPQYST VNGHRFPTTT DHTHRGNSAD
501: PLFLSAPSTS LLRDMRKTSV VWDAEAGRYV SSAPVTTMPE VRNRNQRAIL PPQGSSSLKA HLPLQQAERR LIYTGDSIFF GGPLVNIQTR NNQRTEVREG
601: QERLASTLHQ DARYRRDSTS HQLPVFAPPL
Best Arabidopsis Sequence Match ( AT3G22180.1 )
(BLAST)
001: MVRKHGWQLP AHTLQVIAIT VFCLLVVAFY AFFAPFVGGR IWEYVLIGVY SPVAILVFVL YVRCTAINPA DPRIMSIFDT GVNGDGMVRG LSRNYDETGS
101: QLQASPSVVS RSSTVAGNSS VKGSVEDAQR VESVSRRSCY NPLAVFCYVF VVEDCRKKEG PAEEQGNSEE ALFCTLCNCE VRKFSKHCRS CDKCVDCFDH
201: HCKWLNNCVG RKNYVTFVSL MSASLLWLII EAAVGIAVIV RVFVNKQTME TEIVNRLGNS FSRAPLAAVV GLCTAVAIFA CFPLGELLFF HMLLIKKGIT
301: TYEYVVAMRA MSEAPDGASV DEEIQNVLYS PTGSATTGFS GGSSLGLPYR GVWCTPPRVF DNQDEVIPHL DPCMVPSTVD PDAPGSEKGT KALKRPVKRN
401: AWKLAKLDPN EAARAAARAR ASSSVLRPID NRHLPDNDLS SIGTVSIISS VSTDANVAAS KEIRNNDLRS SLSRNSFAPS QGSRDEYDTG SHGMSNLSSP
501: SHVHESVTLA PLPQNPTIVG NRFTATSHHM HSTFDDKVLH RGNDADPLFL FAPATSHLRD VRKTSVVWDP EAGRYVSAPV TTTSEVRNRL LNPSSQTAST
601: QNPRPILPAH DSSSGSSALR DPLPLHQAER RLTYTGDSIF YGGPLINIPT RDTPRSGRGL VRDVQDRLAS TVHRDARIRR DSTSNQLPVF APGGLGANSQ
701: TGSNIK
Arabidopsis Description
PAT20Probable protein S-acyltransferase 20 [Source:UniProtKB/Swiss-Prot;Acc:Q9LIE4]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.