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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, golgi, plasma membrane

Predictor Summary:
  • nucleus 1
  • extracellular 3
  • endoplasmic reticulum 4
  • vacuole 3
  • plasma membrane 4
  • golgi 4
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, golgi, plasma membrane
Any Predictor:nucleus, secretory
BaCelLo:nucleus
iPSORT:secretory
MultiLoc:endoplasmic reticulum
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY39504 Canola endoplasmic reticulum, golgi, plasma membrane 71.43 73.02
AT3G22180.1 Thale cress plasma membrane 56.83 51.84
CDY47797 Canola plasma membrane 51.86 51.54
GSMUA_Achr8P33480_001 Banana endoplasmic reticulum, golgi, plasma membrane 41.61 46.85
GSMUA_Achr7P03550_001 Banana golgi 40.37 46.18
GSMUA_Achr11P... Banana golgi 40.84 45.42
VIT_03s0017g01770.t01 Wine grape plasma membrane 51.4 44.85
CDY22939 Canola golgi 51.24 44.35
Solyc05g016030.2.1 Tomato endoplasmic reticulum, golgi, plasma membrane 47.83 42.78
KRH29083 Soybean plasma membrane 46.89 41.03
KRH24108 Soybean plasma membrane 47.05 41.0
CDY37703 Canola plasma membrane 30.43 40.33
CDY23719 Canola plasma membrane 33.54 39.34
TraesCS7B01G174700.1 Wheat golgi 39.6 39.11
TraesCS5B01G368600.1 Wheat plasma membrane 41.77 39.04
KXG35088 Sorghum golgi 42.39 38.5
TraesCS7A01G277000.1 Wheat golgi 38.82 38.34
TraesCS5A01G366200.1 Wheat plasma membrane 40.68 38.03
TraesCS5D01G375800.1 Wheat plasma membrane 40.68 38.03
Os09t0563250-01 Rice plasma membrane 41.3 38.0
Zm00001d031977_P001 Maize golgi 39.91 37.68
TraesCS7D01G277000.2 Wheat golgi 38.2 37.61
HORVU5Hr1G090020.3 Barley endoplasmic reticulum, plasma membrane 40.99 37.55
KXG25411 Sorghum golgi 40.22 37.0
HORVU7Hr1G058360.1 Barley nucleus, peroxisome 39.29 35.63
Zm00001d019637_P001 Maize plasma membrane 41.61 34.05
CDX74717 Canola golgi, plasma membrane 4.35 31.11
CDY28549 Canola plasma membrane 26.86 30.3
CDX95936 Canola plasma membrane 25.62 29.89
CDY40920 Canola plasma membrane 26.71 29.81
CDY44067 Canola plasma membrane 26.24 29.7
CDY07350 Canola plasma membrane 25.93 29.04
CDY51503 Canola plasma membrane 25.93 28.45
CDX84493 Canola cytosol 6.06 28.26
CDY01925 Canola golgi 19.88 25.15
CDX97254 Canola plasma membrane 19.41 24.56
Protein Annotations
KEGG:00561+2.3.1.22MapMan:35.1GO:A0A078J6G9UniProt:A0A078J6G9EnsemblPlants:CDY58751ProteinID:CDY58751
ProteinID:CDY58751.1GO:GO:0003674GO:GO:0003824GO:GO:0005575GO:GO:0016020GO:GO:0016021
GO:GO:0016740GO:GO:0016746GO:GO:0019706EnsemblPlantsGene:GSBRNA2T00025113001PFAM:PF01529PFscan:PS50216
PANTHER:PTHR22883PANTHER:PTHR22883:SF15MetaCyc:PWY-7420InterPro:Palmitoyltrfase_DHHCTMHMM:TMhelixUniParc:UPI0004EF3E89
SEG:seg:::::
Description
BnaCnng33710DS-acyltransferase [Source:UniProtKB/TrEMBL;Acc:A0A078J6G9]
Coordinates
chrLK033696:-:31876..34647
Molecular Weight (calculated)
70598.1 Da
IEP (calculated)
8.844
GRAVY (calculated)
-0.154
Length
644 amino acids
Sequence
(BLAST)
001: MVRRHGWQLP ADTLQMIAVT VFCLLVVAYF AFFAPFAGGR VWEYVLIGVY SPVALLVFVL YVRCTAINPA DPRIMTHPLS ARDISRSFNE SGSQLQSCPS
101: GVSMSSTFAA NSSVVRGSVG DDERVDSVTR KSCYNPLAML CCVFVLDDCW KQEEEQGNSR VGMYCMFCNC EVHTSSKHCR RCDKCVDGFD HHCKWLNNCV
201: GRKNYMSFVS LITASLVWLI IEAAVGVAVI VRVFSDKKRM ETEIVNRLGS SFSRAPLAAV VGVCTVVTIP ACYHLAQLLF FHTLLIKKGL TTYDYLLAIR
301: AMSEAPAGAS VDEEIQSVLY SPSGSATTGF SGGSSLGPSH RKGVWCTPPR VFDNQDEVIP QLGSHMVPST VDPERGIKAP KRSVKRSAWK LAKLDANEAA
401: RAAARARASS SVLRPIHNPH LPDHELSSVA ATVSSVSTDA NVAARKEMRN NDLKPSLSRN SFAAPSQSSR DEYDDESATL APLPQYSTVN GHRFSATTTT
501: HHTHRGNSGD ALFLSAPSTS LLRDVRKTSV VWDAEAGRYV SLAPVTTMPQ VRNRNQRAIL PPQSSSSVSA LKAPLPLQQA ERSRLIYTGD SIFFGGPLVN
601: IQTRNNPRSE VREGQERLAS THHQDARYRR DSTSHQLPVF APPL
Best Arabidopsis Sequence Match ( AT3G22180.1 )
(BLAST)
001: MVRKHGWQLP AHTLQVIAIT VFCLLVVAFY AFFAPFVGGR IWEYVLIGVY SPVAILVFVL YVRCTAINPA DPRIMSIFDT GVNGDGMVRG LSRNYDETGS
101: QLQASPSVVS RSSTVAGNSS VKGSVEDAQR VESVSRRSCY NPLAVFCYVF VVEDCRKKEG PAEEQGNSEE ALFCTLCNCE VRKFSKHCRS CDKCVDCFDH
201: HCKWLNNCVG RKNYVTFVSL MSASLLWLII EAAVGIAVIV RVFVNKQTME TEIVNRLGNS FSRAPLAAVV GLCTAVAIFA CFPLGELLFF HMLLIKKGIT
301: TYEYVVAMRA MSEAPDGASV DEEIQNVLYS PTGSATTGFS GGSSLGLPYR GVWCTPPRVF DNQDEVIPHL DPCMVPSTVD PDAPGSEKGT KALKRPVKRN
401: AWKLAKLDPN EAARAAARAR ASSSVLRPID NRHLPDNDLS SIGTVSIISS VSTDANVAAS KEIRNNDLRS SLSRNSFAPS QGSRDEYDTG SHGMSNLSSP
501: SHVHESVTLA PLPQNPTIVG NRFTATSHHM HSTFDDKVLH RGNDADPLFL FAPATSHLRD VRKTSVVWDP EAGRYVSAPV TTTSEVRNRL LNPSSQTAST
601: QNPRPILPAH DSSSGSSALR DPLPLHQAER RLTYTGDSIF YGGPLINIPT RDTPRSGRGL VRDVQDRLAS TVHRDARIRR DSTSNQLPVF APGGLGANSQ
701: TGSNIK
Arabidopsis Description
PAT20Probable protein S-acyltransferase 20 [Source:UniProtKB/Swiss-Prot;Acc:Q9LIE4]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.