Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, golgi
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 6
- golgi 6
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra019236.1-P | Field mustard | golgi, plasma membrane | 97.78 | 97.78 |
| CDX95936 | Canola | plasma membrane | 58.89 | 9.6 |
| CDY44067 | Canola | plasma membrane | 60.0 | 9.49 |
| CDY28549 | Canola | plasma membrane | 60.0 | 9.46 |
| CDY40920 | Canola | plasma membrane | 58.89 | 9.19 |
| CDY07350 | Canola | plasma membrane | 56.67 | 8.87 |
| CDY51503 | Canola | plasma membrane | 56.67 | 8.69 |
| CDY37703 | Canola | plasma membrane | 40.0 | 7.41 |
| CDY23719 | Canola | plasma membrane | 40.0 | 6.56 |
| CDY47797 | Canola | plasma membrane | 37.78 | 5.25 |
| CDX97254 | Canola | plasma membrane | 28.89 | 5.11 |
| CDY01925 | Canola | golgi | 27.78 | 4.91 |
| CDY39504 | Canola | endoplasmic reticulum, golgi, plasma membrane | 31.11 | 4.44 |
| CDY58751 | Canola | endoplasmic reticulum, golgi, plasma membrane | 31.11 | 4.35 |
| CDY22939 | Canola | golgi | 35.56 | 4.3 |
| CDX84493 | Canola | cytosol | 4.44 | 2.9 |
Protein Annotations
| EnsemblPlants:CDX74717 | EnsemblPlantsGene:GSBRNA2T00116678001 | GO:A0A078CCX2 | PANTHER:PTHR22883 | PANTHER:PTHR22883:SF105 | ProteinID:CDX74717 |
| ProteinID:CDX74717.1 | SEG:seg | TMHMM:TMhelix | UniParc:UPI0004EE5E11 | MapMan:35.2 | : |
Description
BnaA05g04630D
Coordinates
chrLK031802:+:310795..312117
Molecular Weight (calculated)
10428.9 Da
IEP (calculated)
10.220
GRAVY (calculated)
0.278
Length
90 amino acids
Sequence
(BLAST)
(BLAST)
1: MRKHGWQLPY HPLQVVAVAV FLALGFAFYV FFAPFVGNKI HQYIAMSIYT PLFHWFHSLT CLVRYRSGPM KRLGASLIYK KNGEYALDTS
001: MRKHGWQLPY HPLQVVAVAV FLALGFAFYV FFAPFVGKKI HQYIAMGIYT PLITCVVGLY IWCAASDPAD RGVFRSKKYL KIPENGKFPL AKDIKDGCGS
101: ATGGAKSHDG TCVEDTENGS NKKLESSERS SLLRLLCSPC ALLCSCCSGK DESSEQMSED GMFYCSLCEV EVFKYSKHCR VCDKCVDRFD HHCRWLNNCI
201: GKRNYRKFFS LMVSAIFLLI MQWSTGIFVL VLCLLRRNQF NADIALKLGS SFSLIPFVIV VGVCTVLAML ATLPLAQLFF FHILLIKKGI STYDYIVALR
301: EQEQELEAGG GQQSPQMSMI SSFTGLSSAS SFNTFHRGAW CTPPRLFLED QFDVVPPENA SVSSYGKKSV VEERVKKKPQ PVKISPWTLA RLNAEEVSKA
401: AAEARKKSKI IQPVARRENP FVGLEASSSF GSSGRRMFPT KYEGVNNNGK QRRQSKRIRL PAELPLEPLM NVQTKAAMET STSSGLAPLQ LEARSAFQTS
501: RAMSGSGNVM VTSSPESSLD SHDIHPFRVS SEAEDAAQLN GFSSAVGLMG QQRGQQQQQQ LSMMMMPLSR STSDGYDASG GEDSDQVPSR NIHKSR
101: ATGGAKSHDG TCVEDTENGS NKKLESSERS SLLRLLCSPC ALLCSCCSGK DESSEQMSED GMFYCSLCEV EVFKYSKHCR VCDKCVDRFD HHCRWLNNCI
201: GKRNYRKFFS LMVSAIFLLI MQWSTGIFVL VLCLLRRNQF NADIALKLGS SFSLIPFVIV VGVCTVLAML ATLPLAQLFF FHILLIKKGI STYDYIVALR
301: EQEQELEAGG GQQSPQMSMI SSFTGLSSAS SFNTFHRGAW CTPPRLFLED QFDVVPPENA SVSSYGKKSV VEERVKKKPQ PVKISPWTLA RLNAEEVSKA
401: AAEARKKSKI IQPVARRENP FVGLEASSSF GSSGRRMFPT KYEGVNNNGK QRRQSKRIRL PAELPLEPLM NVQTKAAMET STSSGLAPLQ LEARSAFQTS
501: RAMSGSGNVM VTSSPESSLD SHDIHPFRVS SEAEDAAQLN GFSSAVGLMG QQRGQQQQQQ LSMMMMPLSR STSDGYDASG GEDSDQVPSR NIHKSR
Arabidopsis Description
PAT22S-acyltransferase [Source:UniProtKB/TrEMBL;Acc:A0A178WF77]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.