Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 3
- endoplasmic reticulum 4
- vacuole 3
- plasma membrane 5
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G69420.1 | CDY42827 | AT2G42580.1 | 19000166 |
| AT1G69420.1 | CDY51514 | AT2G42580.1 | 19000166 |
| AT1G69420.1 | CDY55390 | AT2G42580.1 | 19000166 |
| AT1G69420.1 | CDY61202 | AT2G42580.1 | 19000166 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT1G69420.1 | Thale cress | plasma membrane | 79.56 | 78.36 |
| CDY40920 | Canola | plasma membrane | 76.32 | 77.64 |
| GSMUA_Achr4P10850_001 | Banana | extracellular | 4.26 | 75.76 |
| CDX95936 | Canola | plasma membrane | 71.04 | 75.54 |
| CDY44067 | Canola | plasma membrane | 73.08 | 75.4 |
| CDY28549 | Canola | plasma membrane | 72.06 | 74.08 |
| CDY07350 | Canola | plasma membrane | 69.85 | 71.3 |
| GSMUA_Achr10P... | Banana | plasma membrane | 42.76 | 59.62 |
| GSMUA_Achr5P16110_001 | Banana | plasma membrane | 27.77 | 58.84 |
| CDX74717 | Canola | golgi, plasma membrane | 8.69 | 56.67 |
| VIT_01s0113g00420.t01 | Wine grape | endoplasmic reticulum, golgi, plasma membrane | 60.48 | 56.17 |
| PGSC0003DMT400072839 | Potato | plasma membrane | 58.77 | 54.76 |
| KRH74943 | Soybean | plasma membrane | 57.92 | 54.57 |
| KRH70813 | Soybean | plasma membrane | 57.75 | 54.24 |
| KRG89539 | Soybean | endoplasmic reticulum, golgi, plasma membrane | 56.73 | 53.54 |
| HORVU3Hr1G033580.1 | Barley | plasma membrane | 14.48 | 52.8 |
| KRH50551 | Soybean | plasma membrane | 55.88 | 52.65 |
| Solyc05g012790.2.1 | Tomato | plasma membrane | 56.22 | 52.38 |
| TraesCS4B01G252500.1 | Wheat | plasma membrane | 49.23 | 49.4 |
| Os07t0596000-01 | Rice | plasma membrane | 20.78 | 49.19 |
| Os03t0209500-01 | Rice | endoplasmic reticulum, golgi, plasma membrane | 49.91 | 49.0 |
| GSMUA_Achr6P07830_001 | Banana | endoplasmic reticulum, golgi, plasma membrane | 51.96 | 48.88 |
| TraesCS4D01G252800.1 | Wheat | plasma membrane | 48.38 | 48.46 |
| TraesCS4A01G051700.1 | Wheat | plasma membrane | 48.21 | 48.29 |
| TraesCS2B01G209800.1 | Wheat | golgi | 49.91 | 47.88 |
| CDX84493 | Canola | cytosol | 11.24 | 47.83 |
| HORVU2Hr1G034630.4 | Barley | plasma membrane | 49.74 | 47.71 |
| TraesCS2D01G191000.1 | Wheat | plasma membrane | 49.23 | 47.3 |
| TraesCS2A01G183200.1 | Wheat | plasma membrane | 49.23 | 47.22 |
| Os10t0337500-01 | Rice | plasma membrane | 47.87 | 47.15 |
| HORVU4Hr1G060520.1 | Barley | endoplasmic reticulum, plasma membrane, vacuole | 15.16 | 47.09 |
| KXG39903 | Sorghum | plasma membrane | 47.7 | 46.28 |
| EER99646 | Sorghum | plasma membrane | 48.04 | 45.7 |
| Zm00001d030508_P001 | Maize | plasma membrane | 44.8 | 45.03 |
| Zm00001d006757_P003 | Maize | plasma membrane | 49.4 | 43.28 |
| Zm00001d022038_P007 | Maize | plasma membrane | 50.43 | 42.9 |
| HORVU4Hr1G069190.5 | Barley | cytosol, peroxisome | 49.06 | 40.68 |
| Zm00001d028039_P004 | Maize | plasma membrane, plastid | 48.72 | 37.43 |
| CDY37703 | Canola | plasma membrane | 28.96 | 34.98 |
| GSMUA_Achr4P10840_001 | Banana | extracellular, mitochondrion, plasma membrane, plastid | 13.97 | 34.31 |
| GSMUA_Achr5P16100_001 | Banana | endoplasmic reticulum, extracellular, plasma membrane | 16.18 | 33.1 |
| CDY23719 | Canola | plasma membrane | 28.79 | 30.78 |
| CDY47797 | Canola | plasma membrane | 29.64 | 26.85 |
| CDY58751 | Canola | endoplasmic reticulum, golgi, plasma membrane | 28.45 | 25.93 |
| CDY39504 | Canola | endoplasmic reticulum, golgi, plasma membrane | 26.92 | 25.08 |
| CDY22939 | Canola | golgi | 29.98 | 23.66 |
| CDY01925 | Canola | golgi | 20.44 | 23.58 |
| CDX97254 | Canola | plasma membrane | 20.1 | 23.18 |
Protein Annotations
| KEGG:00561+2.3.1.22 | MapMan:35.1 | GO:A0A078IR10 | UniProt:A0A078IR10 | EnsemblPlants:CDY51503 | ProteinID:CDY51503 |
| ProteinID:CDY51503.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0016740 | GO:GO:0016746 | GO:GO:0019706 | EnsemblPlantsGene:GSBRNA2T00003597001 | PFAM:PF01529 | PFscan:PS50216 |
| PANTHER:PTHR22883 | PANTHER:PTHR22883:SF119 | MetaCyc:PWY-7420 | InterPro:Palmitoyltrfase_DHHC | TMHMM:TMhelix | UniParc:UPI0004EE0A01 |
| SEG:seg | : | : | : | : | : |
Description
BnaC06g43440DS-acyltransferase [Source:UniProtKB/TrEMBL;Acc:A0A078IR10]
Coordinates
chrLK033002:-:56945..60183
Molecular Weight (calculated)
65077.2 Da
IEP (calculated)
8.782
GRAVY (calculated)
-0.206
Length
587 amino acids
Sequence
(BLAST)
(BLAST)
001: MRKHGWQLPY HPLQVVAVTV FLALGFAFYV FFAPFVGSKL HQYIAMGIYS PLITCVVGLY IWCAASDPAD RGVFRSKKYL KVPENEKFTQ SKDTKDGCGS
101: TPGGAKSHDS TCVQDQENRT SKKLESSQKS SIMRLLCSPC ALLCGCCSGR GESSEQQTSE DGMFYCTLCE VEVFKYSKHC RVCDKCVDSF DHHCRWINNC
201: IGKRNYRKFF SLMVSAIFLL IMQWSTGIYV LVLCLLRRNQ FNVDIAFKLG SSFSLVPFVI VIGVCTLLAM LATLPLAQLF FFHILLVKKG ISTYDYIVAL
301: REQEQELEGG GGQQSPQMSM ISSFTGLSSA SSFNAFHRGA WCTPPRLFVE DQFDVVPPEN ASVSSYGKKT VVAEEHVKKK QPVKISPWTL ARLNAEEVSK
401: AAAEARKKSK IIQPLARREN PFVGLEASSS GRRMFPAKFE AVNSNGKLQR RQSKRIRLPA EPLMNVQSRA ASSGLAPLQL EARSAFQTSR EMSGSGGGVM
501: VASSPESSLE DSHDIHPFRV SSEAENSMQL DGFSSAVGLM SNQQIEQQKQ QQSMMMMTLS RSTSDGYDAS GGEDSDQVPS RNIHKSR
101: TPGGAKSHDS TCVQDQENRT SKKLESSQKS SIMRLLCSPC ALLCGCCSGR GESSEQQTSE DGMFYCTLCE VEVFKYSKHC RVCDKCVDSF DHHCRWINNC
201: IGKRNYRKFF SLMVSAIFLL IMQWSTGIYV LVLCLLRRNQ FNVDIAFKLG SSFSLVPFVI VIGVCTLLAM LATLPLAQLF FFHILLVKKG ISTYDYIVAL
301: REQEQELEGG GGQQSPQMSM ISSFTGLSSA SSFNAFHRGA WCTPPRLFVE DQFDVVPPEN ASVSSYGKKT VVAEEHVKKK QPVKISPWTL ARLNAEEVSK
401: AAAEARKKSK IIQPLARREN PFVGLEASSS GRRMFPAKFE AVNSNGKLQR RQSKRIRLPA EPLMNVQSRA ASSGLAPLQL EARSAFQTSR EMSGSGGGVM
501: VASSPESSLE DSHDIHPFRV SSEAENSMQL DGFSSAVGLM SNQQIEQQKQ QQSMMMMTLS RSTSDGYDAS GGEDSDQVPS RNIHKSR
001: MRKHGWQLPY HPLQVVAVAV FLALGFAFYV FFAPFVGKKI HQYIAMGIYT PLITCVVGLY IWCAASDPAD RGVFRSKKYL KIPENGKFPL AKDIKDGCGS
101: ATGGAKSHDG TCVEDTENGS NKKLESSERS SLLRLLCSPC ALLCSCCSGK DESSEQMSED GMFYCSLCEV EVFKYSKHCR VCDKCVDRFD HHCRWLNNCI
201: GKRNYRKFFS LMVSAIFLLI MQWSTGIFVL VLCLLRRNQF NADIALKLGS SFSLIPFVIV VGVCTVLAML ATLPLAQLFF FHILLIKKGI STYDYIVALR
301: EQEQELEAGG GQQSPQMSMI SSFTGLSSAS SFNTFHRGAW CTPPRLFLED QFDVVPPENA SVSSYGKKSV VEERVKKKPQ PVKISPWTLA RLNAEEVSKA
401: AAEARKKSKI IQPVARRENP FVGLEASSSF GSSGRRMFPT KYEGVNNNGK QRRQSKRIRL PAELPLEPLM NVQTKAAMET STSSGLAPLQ LEARSAFQTS
501: RAMSGSGNVM VTSSPESSLD SHDIHPFRVS SEAEDAAQLN GFSSAVGLMG QQRGQQQQQQ LSMMMMPLSR STSDGYDASG GEDSDQVPSR NIHKSR
101: ATGGAKSHDG TCVEDTENGS NKKLESSERS SLLRLLCSPC ALLCSCCSGK DESSEQMSED GMFYCSLCEV EVFKYSKHCR VCDKCVDRFD HHCRWLNNCI
201: GKRNYRKFFS LMVSAIFLLI MQWSTGIFVL VLCLLRRNQF NADIALKLGS SFSLIPFVIV VGVCTVLAML ATLPLAQLFF FHILLIKKGI STYDYIVALR
301: EQEQELEAGG GQQSPQMSMI SSFTGLSSAS SFNTFHRGAW CTPPRLFLED QFDVVPPENA SVSSYGKKSV VEERVKKKPQ PVKISPWTLA RLNAEEVSKA
401: AAEARKKSKI IQPVARRENP FVGLEASSSF GSSGRRMFPT KYEGVNNNGK QRRQSKRIRL PAELPLEPLM NVQTKAAMET STSSGLAPLQ LEARSAFQTS
501: RAMSGSGNVM VTSSPESSLD SHDIHPFRVS SEAEDAAQLN GFSSAVGLMG QQRGQQQQQQ LSMMMMPLSR STSDGYDASG GEDSDQVPSR NIHKSR
Arabidopsis Description
PAT22S-acyltransferase [Source:UniProtKB/TrEMBL;Acc:A0A178WF77]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.