Factsheet for Os03t0209500-01

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi, plasma membrane

Predictor Summary:

nucleus 1
extracellular 4
endoplasmic reticulum 5
vacuole 4
plasma membrane 5
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi, plasma membrane
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	golgi

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0218200-00
Os05t0210600-01
Os05t0587300-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G69420.1	Os01t0218200-00	AT2G42580.1	19000166
AT1G69420.1	Os05t0210600-01	AT2G42580.1	19000166
AT1G69420.1	Os05t0587300-01	AT2G42580.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G252500.1	Wheat	plasma membrane	76.42	78.12
TraesCS4D01G252800.1	Wheat	plasma membrane	75.59	77.13
TraesCS4A01G051700.1	Wheat	plasma membrane	74.58	76.11
GSMUA_Achr4P10850_001	Banana	extracellular	4.01	72.73
KXG39903	Sorghum	plasma membrane	72.58	71.74
Os10t0337500-01	Rice	plasma membrane	66.89	67.11
GSMUA_Achr10P...	Banana	plasma membrane	43.31	61.52
HORVU4Hr1G069190.5	Barley	cytosol, peroxisome	70.9	59.89
GSMUA_Achr5P16110_001	Banana	plasma membrane	26.42	57.04
GSMUA_Achr6P07830_001	Banana	endoplasmic reticulum, golgi, plasma membrane	59.03	56.57
CDX95936	Canola	plasma membrane	51.67	55.98
Zm00001d028039_P004	Maize	plasma membrane, plastid	70.23	54.97
CDY40920	Canola	plasma membrane	51.84	53.73
CDY44067	Canola	plasma membrane	50.84	53.43
KRH74943	Soybean	plasma membrane	55.18	52.97
CDY28549	Canola	plasma membrane	50.5	52.89
AT1G69420.1	Thale cress	plasma membrane	52.34	52.52
KRH70813	Soybean	plasma membrane	54.85	52.48
Bra004380.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	51.17	51.26
VIT_01s0113g00420.t01	Wine grape	endoplasmic reticulum, golgi, plasma membrane	53.85	50.95
Bra038305.1-P	Field mustard	plasma membrane	50.0	50.76
KRG89539	Soybean	endoplasmic reticulum, golgi, plasma membrane	52.34	50.32
Os07t0596000-01	Rice	plasma membrane	20.74	50.0
CDY51503	Canola	plasma membrane	49.0	49.91
Solyc05g012790.2.1	Tomato	plasma membrane	51.84	49.21
KRH50551	Soybean	plasma membrane	51.0	48.96
CDY07350	Canola	plasma membrane	46.66	48.52
PGSC0003DMT400072839	Potato	plasma membrane	50.84	48.25
Bra004000.1-P	Field mustard	cytosol, nucleus, plasma membrane	41.47	45.09
GSMUA_Achr5P16100_001	Banana	endoplasmic reticulum, extracellular, plasma membrane	18.39	38.33
CDX84493	Canola	cytosol	8.36	36.23
GSMUA_Achr4P10840_001	Banana	extracellular, mitochondrion, plasma membrane, plastid	14.21	35.56
Os04t0585100-01	Rice	golgi	29.1	28.25
Os09t0563250-01	Rice	plasma membrane	30.77	26.29
Os12t0263100-01	Rice	plasma membrane	21.74	24.67

Protein Annotations

MapMan:35.1	EntrezGene:4332017	ProteinID:ABF94578.1	EMBL:AK121902	ProteinID:BAF11249.1	ProteinID:BAS82895.1
ProteinID:EEE58560.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
GO:GO:0016740	GO:GO:0016746	GO:GO:0019706	EnsemblPlantsGene:Os03g0209500	EnsemblPlants:Os03t0209500-01	PFAM:PF01529
PFscan:PS50216	PANTHER:PTHR22883	PANTHER:PTHR22883:SF105	InterPro:Palmitoyltrfase_DHHC	UniProt:Q10Q54	TMHMM:TMhelix
UniParc:UPI0000DB451D	RefSeq:XP_015632887.1	SEG:seg	:	:	:

Description

Zinc finger, DHHC-type domain containing protein. (Os03t0209500-01)

Coordinates

chr3:-:5710240..5715009

Molecular Weight (calculated)

65480.1 Da

IEP (calculated)

7.778

GRAVY (calculated)

-0.191

Length

598 amino acids

Sequence
(BLAST)

001: MRKHGWQLPY HPLQVVAIAV FLALGFAFYV FFVPFVGRKA FQYVAMVLYT PLITSVVVLY IWCAATNPGD PGIFKSAEHP KLKDGRRSQK NSDHGLSQGG
101: KMSSDGFNAV DNSEKLSSML EQNDSHSWPT FSEILCFPFS CLCKRCFHAD NQSSEQHMSE EGMFFCSLCE AEVLKNSKHC RVCDKCVDGF DHHCRWLNNC
201: IGKRNYKGFF LLMTSAVLLL VMQWLSGALV LILCIVDRGE FSRQIVSKLG SSFSTVVFII VVATCTVLAM IATIPLAQLL CFHILLIKKG ISTYDYIIAL
301: REQEEDQQEE TAGHQSPQMS IISSVTGFST ASSFGPLHRG SWCTPPRLFL EDQFDVIPPE IGMLQNSGSK KTKEDEGARR RTGTVKISPW TLARLNAEEV
401: SRAAAQAKKK SKILKPIARH DVPIGHDINI GGKLVPKADN NRRPDKRGRF PAELSLDPLT RLSASGTESN VSDTAIETSG NLAPLQFEAR SAFQPSAAAS
501: TRNAASSPES SFDSPDLHPF RLSSCTADEM QGAIPHPAQS GIKFSRSTSD GYEASGGEDS DRIPSRIVHR SSNWANAILS SGQGGGPAAD PNMPSSEG

Best Arabidopsis Sequence Match ( AT1G69420.2 )
(BLAST)

001: MRKHGWQLPY HPLQVVAVAV FLALGFAFYV FFAPFVGKKI HQYIAMGIYT PLITCVVGLY IWCAASDPAD RGVFRSKKYL KIPENGKFPL AKDIKDGCGS
101: ATGGAKSHDG TCVEDTENGS NKKLESSERS SLLRLLCSPC ALLCSCCSGK DESSEQMSED GMFYCSLCEV EVFKYSKHCR VCDKCVDRFD HHCRWLNNCI
201: GKRNYRKFFS LMVSAIFLLI MQWSTGIFVL VLCLLRRNQF NADIALKLGS SFSLIPFVIV VGVCTVLAML ATLPLAQLFF FHILLIKKGI STYDYIVALR
301: EQEQELEAGG GQQSPQMSMI SSFTGLSSAS SFNTFHRGAW CTPPRLFLED QFDVVPPENA SVSSYGKKSV VEERVKKKPQ PVKISPWTLA RLNAEEVSKA
401: AAEARKKSKI IQPVARRENP FVGLEASSSF GSSGRRMFPT KYEGVNNNGK QRRQSKRIRL PAELPLEPLM NVQTKAAMET STSSGLAPLQ LEARSAFQTS
501: RAMSGSGNVM VTSSPESSLD SHDIHPFRVS SEAEDAAQLN GFSSAVGLMG QQRGQQQQQQ LSMMMMPLSR STSDGYDASG GEDSDQVPSR NIHKSR

Arabidopsis Description

PAT22S-acyltransferase [Source:UniProtKB/TrEMBL;Acc:A0A178WF77]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.