Skip to main content
crop-pal logo
Rice
Search for another protein from :
Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 3
  • cytosol 3
  • mitochondrion 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:nucleus
EpiLoc:cytosol
MultiLoc:cytosol
Plant-mPloc:nucleus
Predotar:plastid
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
Os01t0188400-01
Os01t0205600-01
Os01t0647100-01
Os01t0731000-01
Os01t0949300-01
Os02t0208100-01
Os02t0473200-01
Os02t0591700-01
Os02t0629000-01
Os02t0665000-01
Os03t0129300-01
Os03t0209500-01
Os03t0299600-01
Os03t0755700-00
Os04t0334700-01
Os04t0334951-01
Os04t0336600-00
Os04t0337000-01
Os04t0414300-00
Os04t0473400-01
Os04t0520700-01
Os04t0686700-01
Os05t0186300-01
Os05t0342000-00
Os05t0432200-00
Os05t0474900-01
Os05t0510300-01
Os05t0519300-01
Os05t0529200-01
Os05t0529400-01
Os06t0632200-02
Os07t0595900-01
Os07t0596000-01
Os07t0691300-01
Os08t0478200-01
Os08t0504700-01
Os09t0345000-02
Os09t0486500-02
Os10t0114400-01
Os10t0337500-01
Os10t0481000-00
Os10t0512800-01
Os11t0118300-01
Os11t0141400-01
Os11t0168600-01
Os11t0425800-01
Os11t0660500-01
Os12t0117400-01
Os12t0138050-00
Os12t0443700-01

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G42580.1 Os07t0595900-01 AT1G26650.1 19000166
AT2G42580.1 Os03t0129300-01 AT1G42970.1 19000166
AT2G42580.1 Os01t0731000-01 AT1G53400.1 19000166
AT2G42580.1 Os05t0529400-01 AT1G53400.1 19000166
AT2G42580.1 Os09t0345000-02 AT1G53400.1 19000166
AT2G42580.1 Os03t0209500-01 AT1G69420.1 19000166
AT2G42580.1 Os07t0596000-01 AT1G69420.1 19000166
AT2G42580.1 Os10t0337500-01 AT1G69420.1 19000166
AT2G42580.1 Os02t0591700-01 AT1G74050.1 19000166
AT2G42580.1 Os04t0473400-01 AT1G74050.1 19000166
AT2G42580.1 Os05t0432200-00 AT1G75750.1 19000166
AT2G42580.1 Os04t0686700-01 AT1G76920.1 19000166
AT2G42580.1 Os01t0647100-01 AT1G80300.1 19000166
AT2G42580.1 Os02t0208100-01 AT1G80300.1 19000166
AT2G42580.1 Os10t0114400-01 AT2G01950.1 19000166
AT2G42580.1 Os05t0519300-01 AT2G20670.1 19000166
AT2G42580.1 Os04t0414300-00 AT2G27330.1 19000166
AT2G42580.1 Os11t0118300-01 AT2G30520.1 19000166
AT2G42580.1 Os12t0117400-01 AT2G30520.1 19000166
AT2G42580.1 Os01t0949300-01 AT2G41410.1 19000166
AT2G42580.1 Os11t0141400-01 AT2G41410.1 19000166
AT2G42580.1 Os12t0138050-00 AT2G41410.1 19000166
AT2G42580.1 Os02t0473200-01 AT3G02740.1 19000166
AT2G42580.1 Os04t0334700-01 AT3G02740.1 19000166
AT2G42580.1 Os04t0334951-01 AT3G02740.1 19000166
AT2G42580.1 Os04t0336600-00 AT3G02740.1 19000166
AT2G42580.1 Os04t0337000-01 AT3G02740.1 19000166
AT2G42580.1 Os05t0474900-01 AT3G10980.1 19000166
AT2G42580.1 Os03t0299600-01 AT3G10985.1 19000166
AT2G42580.1 Os05t0342000-00 AT3G10985.1 19000166
AT2G42580.1 Os07t0691300-01 AT3G10985.1 19000166
AT2G42580.1 Os08t0504700-01 AT3G12630.1 19000166
AT2G42580.1 Os09t0486500-02 AT3G12630.1 19000166
AT2G42580.1 Os05t0510300-01 AT3G14400.1 19000166
AT2G42580.1 Os11t0660500-01 AT3G16640.1 19000166
AT2G42580.1 Os03t0755700-00 AT3G24830.1 19000166
AT2G42580.1 Os11t0425800-01 AT3G24830.1 19000166
AT2G42580.1 Os08t0478200-01 AT3G52300.1 19000166
AT2G42580.1 Os12t0443700-01 AT3G62120.1 19000166
AT2G42580.1 Os01t0205600-01 AT4G14440.1 19000166
AT2G42580.1 Os05t0529200-01 AT4G14440.1 19000166
AT2G42580.1 Os10t0512800-01 AT4G39050.1 21798944
AT2G42580.1 Os02t0629000-01 AT5G03230.1 19000166
AT2G42580.1 Os04t0520700-01 AT5G03230.1 19000166
AT2G42580.1 Os10t0481000-00 AT5G03230.1 19000166
AT2G42580.1 Os01t0188400-01 AT5G11670.1 19000166
AT2G42580.1 Os02t0665000-01 AT5G11670.1 19000166
AT2G42580.1 Os05t0186300-01 AT5G11670.1 19000166
AT2G42580.1 Os06t0632200-02 AT5G38530.1 19000166
AT2G42580.1 Os11t0168600-01 AT5G42440.1 19000166
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Os01t0616333-01 Rice cytosol, plastid 15.86 72.73
HORVU1Hr1G093390.2 Barley cytosol 75.5 62.26
TraesCS1D01G437100.1 Wheat nucleus 78.2 62.18
TraesCS1A01G427400.1 Wheat cytosol 77.84 61.98
TraesCS1B01G462300.1 Wheat cytosol 77.48 61.96
OQU78515 Sorghum cytosol 77.66 61.57
GSMUA_AchrUn_... Banana cytosol 25.05 51.87
Os05t0210600-01 Rice cytosol 33.15 45.89
GSMUA_Achr4P08560_001 Banana cytosol 55.68 45.11
GSMUA_Achr7P24480_001 Banana cytosol 52.25 44.68
Os01t0218200-00 Rice plastid 52.79 43.6
PGSC0003DMT400054803 Potato cytosol 22.16 41.84
VIT_12s0028g02240.t01 Wine grape cytosol 52.79 41.27
GSMUA_Achr3P25160_001 Banana cytosol 52.43 40.87
KRH22291 Soybean plastid 42.34 40.24
VIT_19s0014g01470.t01 Wine grape cytosol 49.91 39.97
KRH21985 Soybean cytosol 47.93 38.44
KRH55099 Soybean nucleus 46.85 38.35
KRH26223 Soybean nucleus 46.49 38.17
Bra038116.1-P Field mustard cytosol 45.05 37.99
CDY25865 Canola cytosol 45.05 37.99
Bra000267.1-P Field mustard cytosol 45.95 37.95
CDY61202 Canola cytosol 45.77 37.85
KRH27330 Soybean cytosol 47.57 37.82
CDY45930 Canola cytosol 44.86 37.78
AT2G42580.1 Thale cress cytosol 47.03 37.77
Os02t0753500-01 Rice cytosol 19.82 37.67
CDY25722 Canola cytosol, plastid 45.23 37.63
AT3G58620.1 Thale cress cytosol 45.95 37.39
CDY51514 Canola cytosol 44.86 37.22
Bra030946.1-P Field mustard cytosol, plastid 44.86 37.16
CDY02514 Canola cytosol, plastid 44.86 37.16
CDY42827 Canola cytosol 44.68 36.96
CDY55390 Canola cytosol 44.5 36.92
Zm00001d009724_P009 Maize cytosol 70.81 36.76
Bra007405.1-P Field mustard cytosol 44.32 36.55
CDY49237 Canola cytosol 43.78 36.43
PGSC0003DMT400032362 Potato cytosol 45.95 36.43
Bra004709.1-P Field mustard cytosol 43.06 36.38
Solyc07g062580.2.1 Tomato cytosol 45.95 36.38
CDX71941 Canola cytosol 43.96 36.2
AT1G53300.1 Thale cress cytosol 44.86 35.62
GSMUA_AchrUn_... Banana endoplasmic reticulum 31.53 34.79
KRH27037 Soybean nucleus 41.62 34.22
PGSC0003DMT400054909 Potato cytosol 24.14 32.52
Solyc10g007240.1.1 Tomato cytosol 34.41 32.15
PGSC0003DMT400054796 Potato cytosol, plastid 34.77 31.38
Solyc10g007230.1.1 Tomato cytosol 33.69 31.38
PGSC0003DMT400054904 Potato cytosol 34.05 31.29
AT3G14950.1 Thale cress cytosol 39.64 30.14
Solyc10g007220.1.1 Tomato cytosol 27.39 30.1
PGSC0003DMT400054911 Potato cytosol 27.93 29.75
Solyc10g007430.1.1 Tomato cytosol, plastid 19.82 29.1
VIT_18s0001g09830.t01 Wine grape cytosol 13.51 28.41
CDX98517 Canola cytosol 36.58 28.04
CDX97619 Canola cytosol 36.58 28.0
CDY20095 Canola nucleus 36.58 27.88
Bra027292.1-P Field mustard cytosol 36.76 27.79
CDY32327 Canola cytosol 36.22 27.57
PGSC0003DMT400091014 Potato nucleus 29.55 27.02
Bra021583.1-P Field mustard nucleus 36.76 26.98
CDY40820 Canola mitochondrion 13.33 26.33
Bra023793.1-P Field mustard cytosol 19.28 25.97
Solyc10g007420.2.1 Tomato cytosol 19.82 25.88
CDY34222 Canola cytosol 14.05 25.32
PGSC0003DMT400054902 Potato cytosol 13.51 25.08
CDY34223 Canola cytosol 14.05 23.93
Bra023794.1-P Field mustard cytosol, nucleus, plastid 13.51 23.01
Os10t0486900-01 Rice cytosol 7.75 18.22
Solyc10g007250.1.1 Tomato cytosol 8.29 16.49
CDY34224 Canola cytosol 0.72 5.8
Bra023795.1-P Field mustard cytosol 0.72 4.55
Os01t0616300-01 Rice cytosol 0.36 3.23
Protein Annotations
Gene3D:1.25.40.10MapMan:11.3.2.5ProteinID:AAT44159.1ProteinID:BAF18383.1ProteinID:BAS95587.1GO:GO:0003674
GO:GO:0005488GO:GO:0005515GO:GO:0005575GO:GO:0005623GO:GO:0008150GO:GO:0009987
GO:GO:0019725GO:GO:0045454InterPro:IPR011990InterPro:IPR013026InterPro:IPR019734EnsemblPlantsGene:Os05g0587300
EnsemblPlants:Os05t0587300-01PFAM:PF00515PFAM:PF13414PFscan:PS50005PFscan:PS50293PANTHER:PTHR22904
PANTHER:PTHR22904:SF504UniProt:Q6L5C2SMART:SM00028SUPFAM:SSF48452InterPro:TPR-contain_domInterPro:TPR-like_helical_dom_sf
InterPro:TPR_1InterPro:TPR_repeatUniParc:UPI00003A9227SEG:seg::
Description
Molecular chaperone, heat shock protein, Hsp40, DnaJ domain containing protein. (Os05t0587300-01);Hypothetical gene. (Os05t0587300-02)
Coordinates
chr5:-:29257808..29262204
Molecular Weight (calculated)
57670.3 Da
IEP (calculated)
9.283
GRAVY (calculated)
-0.283
Length
555 amino acids
Sequence
(BLAST)
001: MSGADRLSIR AAALALDDAA AGRDKPDTKR DVFADLGSPV SPLRLRPGGA AATPSSSSSS AGSAKSPALC NAGAGVGRGG GGGRGSHSGE LVAEGNPPRP
101: PGHRRSGSGP LIFSGGSSSA GSGGGGGGCG GGSTASSPLT NALPTGNICP SGRVASAAPA PPRRARPDVL GSGTGHYGHG SIMRGGGGMT PPRSSIDASP
201: YHGSYSRSPA PQGSSGGLQE VTRAGNEWYK KGHYGEALRH YDQAVALCPD SAACRSNRAA ALIGLGRLAE ALRECEEAIR RDPASGRAHS RLAALCLRFG
301: MVERAREHFM LAGQVNQSDP AEFQRLQEVE RHLGRCMDAR KTGDWKSALR EADAAIANGA DSSQLLLALR SEALLRLNKL EEADSTITSL SKLDIASLSS
401: MSTKLSGMVA DSYVHVVEAQ VNMAFGRFDI AVTMAEKARV IDPGNTEVGR ITNNIRLVAQ ARGQGNELFK AGKFAEASLA YGEGLKYEPS NPVLYCNRAA
501: CWSKLGRWMK AVEDCNEALK VHPGYTKALL RRAASYAKVS DTCIIVFLII CALWC
Best Arabidopsis Sequence Match ( AT2G42580.1 )
(BLAST)
001: MSHSRRLSLE PAIDSITGRF RDLQRNDDDV NKPDFRELDL GSPVSTLMPR GSASSSAAAT PTSSSGSSGS ASGKPSVSSQ MAKRLDDAYK SHSGELSSPG
101: SGMPTTTRIL KPGHRRSSST GTPLIFSGSS FTSATSHTSP QGGGSGATSA VSPNTGVLPA GNICPSGRIL KTGMASRTSS RTETLCTGTG NYGHGNVVRS
201: GGGGGTSGKA VRVAENGENP EELKRMGNDM YRRGSFSEAL SLYDRAILIS PGNAAYRSNR AAALTALRRL GEAVKECLEA VRIDPSYSRA HQRLASLYLR
301: LGEAENARRH ICFSGQCPDQ ADLQRLQTLE KHLRRCWEAR KIGDWKTAIK ETDAAIANGA DSSPQLVACK AEAFLRLKQI EDSDFCVSCI PRLDHHYHSQ
401: PQVKLFGMVV EAYVLCIQAQ VDMALGRFEN AVVKAERAAM LDQTNPEVVS VLNNVKMVVR ARTRGNELFS SGRFSEACVA YGDGLKQDDS NSVLYCNRAA
501: CWYKLGLWEK SVEDCNHALK SQPSYIKALL RRAASYGKLG RWEDAVKDYE FLRRELPGDS EVAESLERAK TVLMNRSQES KSLGFNNEVE AVSTLDKFKK
601: SVALPGVSVF HFKSSSNRQC EEISPFINTL CLRYPLVHFF MVDVEESMAL AKAESIRKVP TFKMYKNGDK VKEMVCPSHQ FLEDSIKHFL L
Arabidopsis Description
TTL3Inactive TPR repeat-containing thioredoxin TTL3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SIN1]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.