Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, plastid, cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- peroxisome 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Os01t0205600-01 | |
| Os01t0218200-00 | |
| Os05t0210600-01 | |
| Os05t0529200-01 | |
| Os05t0587300-01 |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU1Hr1G081470.3 | Barley | peroxisome | 80.58 | 79.92 |
| Zm00001d038755_P001 | Maize | extracellular, mitochondrion | 79.75 | 79.75 |
| TraesCS1B01G363700.1 | Wheat | mitochondrion, peroxisome | 79.34 | 78.69 |
| TraesCS1D01G352000.1 | Wheat | peroxisome | 78.93 | 78.28 |
| TraesCS1A01G349200.1 | Wheat | mitochondrion, peroxisome | 76.86 | 76.23 |
| EES18539 | Sorghum | mitochondrion, peroxisome, plastid | 74.79 | 74.79 |
| TraesCS1D01G352100.1 | Wheat | peroxisome | 71.49 | 72.38 |
| GSMUA_Achr1P13680_001 | Banana | cytosol, peroxisome, plastid | 54.96 | 53.63 |
| GSMUA_Achr10P... | Banana | peroxisome | 53.31 | 53.09 |
| VIT_05s0049g00180.t01 | Wine grape | mitochondrion, peroxisome, plastid | 50.41 | 51.26 |
| VIT_05s0049g00160.t01 | Wine grape | mitochondrion, peroxisome, plastid | 50.0 | 50.84 |
| PGSC0003DMT400050550 | Potato | peroxisome | 46.69 | 49.34 |
| HORVU1Hr1G082330.11 | Barley | plastid | 24.38 | 48.36 |
| KRH21512 | Soybean | cytosol, peroxisome, plastid | 47.11 | 47.3 |
| KRH31723 | Soybean | peroxisome, plasma membrane, plastid | 47.52 | 46.18 |
| PGSC0003DMT400041985 | Potato | extracellular | 45.45 | 46.03 |
| CDY16410 | Canola | mitochondrion | 45.04 | 45.61 |
| KRH01629 | Soybean | cytosol, peroxisome, plastid | 44.63 | 45.38 |
| CDY67294 | Canola | peroxisome | 44.63 | 45.19 |
| Solyc06g053670.1.1 | Tomato | plastid | 44.63 | 45.19 |
| Os01t0205600-01 | Rice | cytosol, peroxisome, plastid | 45.87 | 44.94 |
| Bra022473.1-P | Field mustard | cytosol | 44.21 | 44.77 |
| CDY47152 | Canola | cytosol, mitochondrion, plastid | 44.21 | 44.58 |
| CDY12468 | Canola | cytosol, mitochondrion, plastid | 44.21 | 44.58 |
| Bra039860.1-P | Field mustard | cytosol, mitochondrion, plastid | 44.21 | 44.58 |
| CDY60945 | Canola | cytosol, mitochondrion, peroxisome, plastid | 43.8 | 44.35 |
| AT4G14440.1 | Thale cress | cytosol | 42.98 | 43.7 |
| KRG89978 | Soybean | cytosol | 24.38 | 43.38 |
| AT1G65520.1 | Thale cress | peroxisome | 42.98 | 43.33 |
| AT4G14430.1 | Thale cress | peroxisome | 42.98 | 43.33 |
| PGSC0003DMT400041986 | Potato | cytosol, mitochondrion, peroxisome, plastid | 17.77 | 43.0 |
| VIT_13s0019g00710.t01 | Wine grape | cytosol, peroxisome, plastid | 42.56 | 42.74 |
| CDY23155 | Canola | peroxisome | 41.74 | 42.44 |
| Bra033483.1-P | Field mustard | peroxisome | 41.74 | 42.44 |
| VIT_13s0019g00690.t01 | Wine grape | cytosol, peroxisome, plastid | 41.74 | 42.08 |
| CDY12773 | Canola | peroxisome | 40.91 | 41.6 |
| Solyc01g091520.2.1 | Tomato | cytosol, mitochondrion, peroxisome | 42.56 | 41.53 |
| PGSC0003DMT400033247 | Potato | cytosol, mitochondrion, peroxisome | 41.32 | 40.32 |
| CDY19969 | Canola | cytosol, nucleus, peroxisome | 45.04 | 38.65 |
| Bra036189.1-P | Field mustard | cytosol, nucleus, peroxisome | 45.04 | 38.65 |
| Solyc05g010720.2.1 | Tomato | peroxisome | 45.87 | 24.72 |
Protein Annotations
| Gene3D:3.90.226.10 | EntrezGene:4339402 | MapMan:5.7.3.5.1 | ProteinID:AAU43967.1 | EMBL:AK065770 | ProteinID:BAF18034.1 |
| ProteinID:BAS95014.1 | InterPro:ClpP/crotonase-like_dom_sf | InterPro:Enoyl-CoA_hydra/iso | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004165 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005777 | GO:GO:0008150 |
| GO:GO:0008152 | EnsemblPlantsGene:Os05g0529200 | EnsemblPlants:Os05t0529200-01 | PFAM:PF00378 | PANTHER:PTHR11941 | PANTHER:PTHR11941:SF106 |
| UniProt:Q65XC3 | SUPFAM:SSF52096 | UniParc:UPI000043F459 | RefSeq:XP_015639504.1 | SEG:seg | : |
Description
Crotonase, core domain containing protein. (Os05t0529200-01);Crotonase, core domain containing protein. (Os05t0529200-02)
Coordinates
chr5:-:26285817..26288430
Molecular Weight (calculated)
25452.1 Da
IEP (calculated)
8.340
GRAVY (calculated)
0.275
Length
242 amino acids
Sequence
(BLAST)
(BLAST)
001: MCTLEQRGRV FVLTLTGDGE HRLGHSLIGS IRAAVSSVAA AAAAAGPGAA LVTVAEGRFF SNGLDIGPGG IPPSRVGELV VALRPLAADL LALPMPTVAA
101: VTGHASAGGF LLTLCHDYRL MRADRGVLYM SEIDIGLPLP PYFVAILRAK ITAAHALRDV TLRGRKLKAA EAKEMGIVDV VCPTAAETAA EAVKLAEQLA
201: ARKWNGNVYS SIRISMFPEA CRSVGIVEES DEEKRNHFAS KL
101: VTGHASAGGF LLTLCHDYRL MRADRGVLYM SEIDIGLPLP PYFVAILRAK ITAAHALRDV TLRGRKLKAA EAKEMGIVDV VCPTAAETAA EAVKLAEQLA
201: ARKWNGNVYS SIRISMFPEA CRSVGIVEES DEEKRNHFAS KL
001: MCTLEKRGDL FLLTLTGEDE HRFHPDTIAS VLSLLEQAKS QSTKGSVLIT TGHGKFFSNG FDLAWAQSAG HGAIKRMHQM VKSFKPVLAA LLDLPMPTIA
101: ALNGHAAASG LMFALSHDYV FMRKDRGVLY MSEVDIGLPV PDYFSALVVA KVGSGIARRE LLLSGKKLKG EEAVALGIVD SAAHDSAEGV VEATVSLGES
201: LAAKKWNGEV YATIRKSLYP ELCRMVDLTA NNLATHNL
101: ALNGHAAASG LMFALSHDYV FMRKDRGVLY MSEVDIGLPV PDYFSALVVA KVGSGIARRE LLLSGKKLKG EEAVALGIVD SAAHDSAEGV VEATVSLGES
201: LAAKKWNGEV YATIRKSLYP ELCRMVDLTA NNLATHNL
Arabidopsis Description
ECI3Enoyl-CoA delta isomerase 3 [Source:UniProtKB/Swiss-Prot;Acc:O23300]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.