Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- peroxisome 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400041986 | Potato | cytosol, mitochondrion, peroxisome, plastid | 25.41 | 31.0 |
| HORVU1Hr1G081470.3 | Barley | peroxisome | 56.56 | 28.28 |
| EES18539 | Sorghum | mitochondrion, peroxisome, plastid | 54.1 | 27.27 |
| Os05t0529200-01 | Rice | cytosol, peroxisome, plastid | 48.36 | 24.38 |
| Zm00001d038755_P001 | Maize | extracellular, mitochondrion | 45.08 | 22.73 |
| GSMUA_Achr1P13680_001 | Banana | cytosol, peroxisome, plastid | 40.16 | 19.76 |
| GSMUA_Achr10P... | Banana | peroxisome | 36.07 | 18.11 |
| VIT_05s0049g00160.t01 | Wine grape | mitochondrion, peroxisome, plastid | 35.25 | 18.07 |
| VIT_05s0049g00180.t01 | Wine grape | mitochondrion, peroxisome, plastid | 34.43 | 17.65 |
| KRH21512 | Soybean | cytosol, peroxisome, plastid | 34.43 | 17.43 |
| PGSC0003DMT400050550 | Potato | peroxisome | 31.97 | 17.03 |
| AT4G14430.1 | Thale cress | peroxisome | 32.79 | 16.67 |
| VIT_13s0019g00690.t01 | Wine grape | cytosol, peroxisome, plastid | 32.79 | 16.67 |
| CDY47152 | Canola | cytosol, mitochondrion, plastid | 32.79 | 16.67 |
| Bra039860.1-P | Field mustard | cytosol, mitochondrion, plastid | 32.79 | 16.67 |
| CDY12468 | Canola | cytosol, mitochondrion, plastid | 32.79 | 16.67 |
| VIT_13s0019g00710.t01 | Wine grape | cytosol, peroxisome, plastid | 32.79 | 16.6 |
| PGSC0003DMT400041985 | Potato | extracellular | 31.97 | 16.32 |
| KRH31723 | Soybean | peroxisome, plasma membrane, plastid | 32.79 | 16.06 |
| KRH01629 | Soybean | cytosol, peroxisome, plastid | 31.15 | 15.97 |
| HORVU3Hr1G026030.1 | Barley | mitochondrion, peroxisome | 30.33 | 15.23 |
| AT4G14440.1 | Thale cress | cytosol | 29.51 | 15.13 |
| Solyc06g053670.1.1 | Tomato | plastid | 29.51 | 15.06 |
| CDY67294 | Canola | peroxisome | 28.69 | 14.64 |
| Bra022473.1-P | Field mustard | cytosol | 28.69 | 14.64 |
| HORVU3Hr1G026050.3 | Barley | cytosol, mitochondrion, peroxisome | 28.69 | 14.64 |
| CDY16410 | Canola | mitochondrion | 28.69 | 14.64 |
| CDY60945 | Canola | cytosol, mitochondrion, peroxisome, plastid | 28.69 | 14.64 |
| AT1G65520.1 | Thale cress | peroxisome | 28.69 | 14.58 |
| Solyc01g091520.2.1 | Tomato | cytosol, mitochondrion, peroxisome | 29.51 | 14.52 |
| PGSC0003DMT400033247 | Potato | cytosol, mitochondrion, peroxisome | 28.69 | 14.11 |
| Bra033483.1-P | Field mustard | peroxisome | 27.05 | 13.87 |
| CDY23155 | Canola | peroxisome | 27.05 | 13.87 |
| CDY12773 | Canola | peroxisome | 26.23 | 13.45 |
| Bra036189.1-P | Field mustard | cytosol, nucleus, peroxisome | 29.51 | 12.77 |
| CDY19969 | Canola | cytosol, nucleus, peroxisome | 29.51 | 12.77 |
| Solyc05g010720.2.1 | Tomato | peroxisome | 27.05 | 7.35 |
| KRG89978 | Soybean | cytosol | 5.74 | 5.15 |
Protein Annotations
| EnsemblPlants:HORVU1Hr1G082330.11 | EnsemblPlantsGene:HORVU1Hr1G082330 | PANTHER:PTHR11941 | PANTHER:PTHR11941:SF106 | SEG:seg | UniParc:UPI000B47B11F |
| UniProt:A0A287GHP2 | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chrchr1H:+:529576358..529579504
Molecular Weight (calculated)
13046.8 Da
IEP (calculated)
9.375
GRAVY (calculated)
-0.036
Length
122 amino acids
Sequence
(BLAST)
(BLAST)
001: KRRPDTTPTQ TLTTLSFVSL AAGAAPMLRL RSSILAHLLS SSPAAKHRAP EAKEMGIVDV VCPGATETAA EALKLIEQLA ARKWDGAVYA SIRMSMFPDA
101: CRAVGIAVES DEEKGRHFAS RL
101: CRAVGIAVES DEEKGRHFAS RL
001: MCTLEKRGDL FLLTLTGEDE HRFHPDTIAS VLSLLEQAKS QSTKGSVLIT TGHGKFFSNG FDLAWAQSAG HGAIKRMHQM VKSFKPVLAA LLDLPMPTIA
101: ALNGHAAASG LMFALSHDYV FMRKDRGVLY MSEVDIGLPV PDYFSALVVA KVGSGIARRE LLLSGKKLKG EEAVALGIVD SAAHDSAEGV VEATVSLGES
201: LAAKKWNGEV YATIRKSLYP ELCRMVDLTA NNLATHNL
101: ALNGHAAASG LMFALSHDYV FMRKDRGVLY MSEVDIGLPV PDYFSALVVA KVGSGIARRE LLLSGKKLKG EEAVALGIVD SAAHDSAEGV VEATVSLGES
201: LAAKKWNGEV YATIRKSLYP ELCRMVDLTA NNLATHNL
Arabidopsis Description
ECI3Enoyl-CoA delta isomerase 3 [Source:UniProtKB/Swiss-Prot;Acc:O23300]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.