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Wine grape
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Wine grape
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, peroxisome, plastid

Predictor Summary:
  • plastid 2
  • mitochondrion 2
  • peroxisome 3
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion, peroxisome, plastid
Any Predictor:mitochondrion, peroxisome, plastid
BaCelLo:plastid
MultiLoc:mitochondrion
Plant-mPloc:peroxisome
PProwler:mitochondrion
PTS1:peroxisome
WoLF PSORT:plastid
YLoc:peroxisome
PPI

Inferred distinct locusB in Crop

locusBlocations
VIT_05s0049g00160.t01
VIT_05s0049g00180.t01
VIT_12s0028g02240.t01
VIT_18s0001g09830.t01

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT4G14430.1 VIT_05s0049g00160.t01 AT4G14440.1 21798944
AT4G14430.1 VIT_05s0049g00180.t01 AT4G14440.1 21798944
AT4G14440.1 VIT_12s0028g02240.t01 AT2G42580.1 19000166
AT4G14440.1 VIT_18s0001g09830.t01 AT2G42580.1 19000166
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
VIT_05s0049g00160.t01 Wine grape mitochondrion, peroxisome, plastid 93.7 93.7
Bra039860.1-P Field mustard cytosol, mitochondrion, plastid 64.71 64.17
PGSC0003DMT400041985 Potato extracellular 63.87 63.6
CDY12468 Canola cytosol, mitochondrion, plastid 63.87 63.33
CDY47152 Canola cytosol, mitochondrion, plastid 63.87 63.33
KRH21512 Soybean cytosol, peroxisome, plastid 62.18 61.41
AT4G14430.1 Thale cress peroxisome 61.76 61.25
Solyc06g053670.1.1 Tomato plastid 60.92 60.67
CDY23155 Canola peroxisome 59.24 59.24
PGSC0003DMT400041986 Potato cytosol, mitochondrion, peroxisome, plastid 24.79 59.0
Bra033483.1-P Field mustard peroxisome 58.82 58.82
CDY12773 Canola peroxisome 58.4 58.4
AT4G14440.1 Thale cress cytosol 57.98 57.98
KRH31723 Soybean peroxisome, plasma membrane, plastid 58.4 55.82
VIT_13s0019g00710.t01 Wine grape cytosol, peroxisome, plastid 55.46 54.77
GSMUA_Achr1P13680_001 Banana cytosol, peroxisome, plastid 56.3 54.03
VIT_13s0019g00690.t01 Wine grape cytosol, peroxisome, plastid 53.78 53.33
TraesCS1B01G363700.1 Wheat mitochondrion, peroxisome 52.52 51.23
HORVU1Hr1G081470.3 Barley peroxisome 52.52 51.23
TraesCS3B01G154300.1 Wheat mitochondrion 50.0 50.42
Zm00001d038755_P001 Maize extracellular, mitochondrion 51.26 50.41
Os05t0529200-01 Rice cytosol, peroxisome, plastid 51.26 50.41
TraesCS1D01G352100.1 Wheat peroxisome 50.42 50.21
GSMUA_Achr10P... Banana peroxisome 51.26 50.21
HORVU3Hr1G026030.1 Barley mitochondrion, peroxisome 50.84 49.79
TraesCS3A01G136600.1 Wheat cytosol, peroxisome, plastid 50.42 49.79
TraesCS1A01G349200.1 Wheat mitochondrion, peroxisome 50.84 49.59
EES18539 Sorghum mitochondrion, peroxisome, plastid 50.42 49.59
TraesCS1D01G352000.1 Wheat peroxisome 50.42 49.18
TraesCS3D01G137500.1 Wheat cytosol 49.16 49.16
HORVU3Hr1G026050.3 Barley cytosol, mitochondrion, peroxisome 47.9 47.7
TraesCS3B01G154500.1 Wheat cytosol 47.9 47.7
TraesCS3D01G137300.1 Wheat plastid 51.26 47.1
EES02280 Sorghum cytosol 46.64 46.06
Zm00001d039408_P001 Maize cytosol, mitochondrion, peroxisome 45.8 45.42
TraesCS3A01G136700.1 Wheat cytosol, mitochondrion, peroxisome 48.74 44.11
Os01t0205600-01 Rice cytosol, peroxisome, plastid 45.38 43.72
Zm00001d008892_P001 Maize cytosol, mitochondrion, peroxisome 44.12 43.39
EES02279 Sorghum mitochondrion, plastid 44.54 42.57
HORVU1Hr1G082330.11 Barley plastid 17.65 34.43
Zm00001d039741_P001 Maize plastid 22.69 33.54
Protein Annotations
EntrezGene:100261285wikigene:100261285Gene3D:3.90.226.10MapMan:5.7.3.5.1ProteinID:CCB48524ProteinID:CCB48524.1
InterPro:ClpP/crotonase-like_dom_sfInterPro:Enoyl-CoA_hydra/isoUniProt:F6H8I1EMBL:FN595496GO:GO:0003674GO:GO:0003824
GO:GO:0004165GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005777
GO:GO:0008150GO:GO:0008152EntrezGene:LOC100261285wikigene:LOC100261285PFAM:PF00378PANTHER:PTHR11941
PANTHER:PTHR11941:SF84SUPFAM:SSF52096TIGR:TC55573UniParc:UPI0001983435ArrayExpress:VIT_05s0049g00180EnsemblPlantsGene:VIT_05s0049g00180
EnsemblPlants:VIT_05s0049g00180.t01unigene:Vvi.3283RefSeq:XP_002284547RefSeq:XP_002284547.1SEG:seg:
Description
No Description!
Coordinates
chr5:+:7235454..7236440
Molecular Weight (calculated)
25856.4 Da
IEP (calculated)
8.107
GRAVY (calculated)
0.058
Length
238 amino acids
Sequence
(BLAST)
001: MCTLEQRGNL FFLTLTGDNE HRLGPSLFDS IRSALAQVKS QATPGSALIT TAQGKFFSNG LDLAWAQAAG SSSFRDRLSH LLDCFKPIVA DLLSLPMPTI
101: AAVSGHAAAA GFMLAISHDY VLMKNDRSVL YMSELDIGLT FPDYFMAMMK SKISDPAARR DVMLRAKKVK AEEAVRMGIV DSAHDSAEST VEAAVRLAEQ
201: LSGRKWNGEV YAEIRKAMHP EVCGLLGLSH RAVVAPRL
Best Arabidopsis Sequence Match ( AT4G14430.1 )
(BLAST)
001: MCTLEKRGDL FLLTLTGDGE HRFHPDTIAT ILSLLEQAKS QSTRGSILIT TANGKFFSNG FDLAWAQTAG SKTGAANRLH QMVESFKPVV AALLDLPMPT
101: IAALNGHAAA AGLILALSHD YVFMRKDRGV LYMSEVDIGL SMPDYFSALV RAKIGTSAAR RELLLSGKKI RGEEAVGLGI VDSAAYDSEE GVVVASVRLG
201: EKLAAKKWSG EVYASIRKSL YPELCGILGL ETRVFATPKL
Arabidopsis Description
ECI2PEC12 [Source:UniProtKB/TrEMBL;Acc:A0A178UV55]
SUBAcon: [peroxisome]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.