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Maize
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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, peroxisome, cytosol

Predictor Summary:
  • peroxisome 1
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
  • cytosol 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, mitochondrion, peroxisome
Any Predictor:mitochondrion, peroxisome, secretory
MultiLoc:peroxisome
PProwler:secretory
WoLF PSORT:cytosol
YLoc:mitochondrion
PPI

Inferred distinct locusB in Crop

locusBlocations
Zm00001d004494_P001
Zm00001d006366_P001
Zm00001d008892_P001
Zm00001d008930_P003
Zm00001d009724_P009
Zm00001d011352_P001
Zm00001d033961_P001
Zm00001d038755_P001
Zm00001d039362_P002
Zm00001d039408_P001
Zm00001d039741_P001
Zm00001d044479_P001

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT4G14430.1 Zm00001d008892_P001 AT4G14440.1 21798944
AT4G14430.1 Zm00001d038755_P001 AT4G14440.1 21798944
AT4G14430.1 Zm00001d039408_P001 AT4G14440.1 21798944
AT4G14430.1 Zm00001d039741_P001 AT4G14440.1 21798944
AT4G14440.1 Zm00001d004494_P001 AT2G42580.1 19000166
AT4G14440.1 Zm00001d006366_P001 AT2G42580.1 19000166
AT4G14440.1 Zm00001d008930_P003 AT2G42580.1 19000166
AT4G14440.1 Zm00001d009724_P009 AT2G42580.1 19000166
AT4G14440.1 Zm00001d011352_P001 AT2G42580.1 19000166
AT4G14440.1 Zm00001d033961_P001 AT2G42580.1 19000166
AT4G14440.1 Zm00001d039362_P002 AT2G42580.1 19000166
AT4G14440.1 Zm00001d044479_P001 AT2G42580.1 19000166
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EES02280 Sorghum cytosol 89.17 88.8
TraesCS3D01G137500.1 Wheat cytosol 73.33 73.95
TraesCS3B01G154300.1 Wheat mitochondrion 71.25 72.46
TraesCS3B01G154500.1 Wheat cytosol 72.08 72.38
TraesCS3A01G136600.1 Wheat cytosol, peroxisome, plastid 71.25 70.95
HORVU3Hr1G026050.3 Barley cytosol, mitochondrion, peroxisome 70.0 70.29
HORVU3Hr1G026030.1 Barley mitochondrion, peroxisome 70.83 69.96
Os01t0205600-01 Rice cytosol, peroxisome, plastid 71.25 69.23
Zm00001d008892_P001 Maize cytosol, mitochondrion, peroxisome 68.75 68.18
TraesCS3A01G136700.1 Wheat cytosol, mitochondrion, peroxisome 74.58 68.06
TraesCS3D01G137300.1 Wheat plastid 71.67 66.41
GSMUA_Achr10P... Banana peroxisome 51.25 50.62
Zm00001d038755_P001 Maize extracellular, mitochondrion 46.25 45.87
VIT_05s0049g00180.t01 Wine grape mitochondrion, peroxisome, plastid 45.42 45.8
VIT_05s0049g00160.t01 Wine grape mitochondrion, peroxisome, plastid 45.0 45.38
Zm00001d039741_P001 Maize plastid 30.42 45.34
CDY12468 Canola cytosol, mitochondrion, plastid 45.0 45.0
Bra039860.1-P Field mustard cytosol, mitochondrion, plastid 45.0 45.0
CDY47152 Canola cytosol, mitochondrion, plastid 45.0 45.0
PGSC0003DMT400041985 Potato extracellular 44.17 44.35
AT4G14430.1 Thale cress peroxisome 44.17 44.17
Solyc06g053670.1.1 Tomato plastid 43.75 43.93
AT4G14440.1 Thale cress cytosol 42.92 43.28
KRH01629 Soybean cytosol, peroxisome, plastid 42.5 42.86
KRG89978 Soybean cytosol 24.17 42.65
KRH31723 Soybean peroxisome, plasma membrane, plastid 44.17 42.57
Bra033483.1-P Field mustard peroxisome 42.08 42.44
CDY12773 Canola peroxisome 41.67 42.02
CDY23155 Canola peroxisome 41.67 42.02
KRH21512 Soybean cytosol, peroxisome, plastid 42.08 41.91
CDY16410 Canola mitochondrion 41.67 41.84
GSMUA_Achr1P13680_001 Banana cytosol, peroxisome, plastid 42.92 41.53
CDY67294 Canola peroxisome 41.25 41.42
Bra022473.1-P Field mustard cytosol 40.83 41.0
VIT_13s0019g00710.t01 Wine grape cytosol, peroxisome, plastid 40.83 40.66
AT1G65520.1 Thale cress peroxisome 40.42 40.42
CDY60945 Canola cytosol, mitochondrion, peroxisome, plastid 40.0 40.17
VIT_13s0019g00690.t01 Wine grape cytosol, peroxisome, plastid 40.0 40.0
PGSC0003DMT400041986 Potato cytosol, mitochondrion, peroxisome, plastid 16.67 40.0
PGSC0003DMT400050550 Potato peroxisome 37.92 39.74
PGSC0003DMT400033247 Potato cytosol, mitochondrion, peroxisome 38.33 37.1
Solyc01g091520.2.1 Tomato cytosol, mitochondrion, peroxisome 37.92 36.69
CDY19969 Canola cytosol, nucleus, peroxisome 41.25 35.11
Bra036189.1-P Field mustard cytosol, nucleus, peroxisome 41.25 35.11
Solyc05g010720.2.1 Tomato peroxisome 35.42 18.93
Protein Annotations
EnsemblPlants:Zm00001d039408_P001EnsemblPlants:Zm00001d039408_T001EnsemblPlantsGene:Zm00001d039408Gene3D:3.90.226.10GO:GO:0003674GO:GO:0003824
GO:GO:0008150GO:GO:0008152GO:GO:0016853InterPro:ClpP/crotonase-like_dom_sfInterPro:Enoyl-CoA_hydra/isoPANTHER:PTHR11941
PANTHER:PTHR11941:SF84PFAM:PF00378ProteinID:ONM28580.1SEG:segSUPFAM:SSF52096UniParc:UPI000221F6F7
UniProt:A0A1D6MGA1MapMan:5.7.3.5.1::::
Description
Enoyl-CoA delta isomerase 2 peroxisomal
Coordinates
chr3:-:3618712..3619434
Molecular Weight (calculated)
24699.8 Da
IEP (calculated)
8.274
GRAVY (calculated)
0.230
Length
240 amino acids
Sequence
(BLAST)
001: MESSSKGMCT VERRGRVHLI TMTGAGEHRL NPDLLAALRS AVAASAGAGA LVLAAEGKFF SNGFDLAWAR AAPPGLHGAM DGGLRALLAD LLALRVPTVA
101: AVTGHAAAAG CALALAHDAA LMRASRGLLY MSEVDVGIKF VDFVAAVLRD KVPDAAARRD LVLRGDRVAA AEAVRRGLVD AAVDGGPEDV VAAAVAEAER
201: LAARGWDGEA VAEIRKAAWP QLWAQVKDHG AGPAPARPRL
Best Arabidopsis Sequence Match ( AT4G14440.1 )
(BLAST)
001: MCTLEKRGDL FLLTLTGEDE HRFHPDTIAS VLSLLEQAKS QSTKGSVLIT TGHGKFFSNG FDLAWAQSAG HGAIKRMHQM VKSFKPVLAA LLDLPMPTIA
101: ALNGHAAASG LMFALSHDYV FMRKDRGVLY MSEVDIGLPV PDYFSALVVA KVGSGIARRE LLLSGKKLKG EEAVALGIVD SAAHDSAEGV VEATVSLGES
201: LAAKKWNGEV YATIRKSLYP ELCRMVDLTA NNLATHNL
Arabidopsis Description
ECI3Enoyl-CoA delta isomerase 3 [Source:UniProtKB/Swiss-Prot;Acc:O23300]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.