Factsheet for TraesCS3D01G137300.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
peroxisome 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, peroxisome, plastid
ChloroP:	plastid
MultiLoc:	peroxisome
Predotar:	plastid
PProwler:	plastid
WoLF PSORT:	mitochondrion
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS1A01G349200.1
TraesCS1A01G427400.1
TraesCS1B01G363700.1
TraesCS1B01G462300.1
TraesCS1D01G352000.1
TraesCS1D01G352100.1
TraesCS1D01G437100.1
TraesCS3A01G136600.1
TraesCS3A01G136700.1
TraesCS3A01G143000.1
TraesCS3A01G221800.1
TraesCS3B01G154300.1
TraesCS3B01G154500.1
TraesCS3B01G162100.1
TraesCS3B01G251600.1
TraesCS3D01G137300.1
TraesCS3D01G137500.1
TraesCS3D01G144600.1
TraesCS3D01G231300.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G14430.1	TraesCS1A01G349200.1	AT4G14440.1	21798944
AT4G14430.1	TraesCS1B01G363700.1	AT4G14440.1	21798944
AT4G14430.1	TraesCS1D01G352000.1	AT4G14440.1	21798944
AT4G14430.1	TraesCS1D01G352100.1	AT4G14440.1	21798944
AT4G14430.1	TraesCS3A01G136600.1	AT4G14440.1	21798944
AT4G14430.1	TraesCS3A01G136700.1	AT4G14440.1	21798944
AT4G14430.1	TraesCS3B01G154300.1	AT4G14440.1	21798944
AT4G14430.1	TraesCS3B01G154500.1	AT4G14440.1	21798944
AT4G14430.1	TraesCS3D01G137300.1	AT4G14440.1	21798944
AT4G14430.1	TraesCS3D01G137500.1	AT4G14440.1	21798944
AT4G14440.1	TraesCS1A01G427400.1	AT2G42580.1	19000166
AT4G14440.1	TraesCS1B01G462300.1	AT2G42580.1	19000166
AT4G14440.1	TraesCS1D01G437100.1	AT2G42580.1	19000166
AT4G14440.1	TraesCS3A01G143000.1	AT2G42580.1	19000166
AT4G14440.1	TraesCS3A01G221800.1	AT2G42580.1	19000166
AT4G14440.1	TraesCS3B01G162100.1	AT2G42580.1	19000166
AT4G14440.1	TraesCS3B01G251600.1	AT2G42580.1	19000166
AT4G14440.1	TraesCS3D01G144600.1	AT2G42580.1	19000166
AT4G14440.1	TraesCS3D01G231300.1	AT2G42580.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU3Hr1G026030.1	Barley	mitochondrion, peroxisome	89.19	95.06
TraesCS3B01G154300.1	Wheat	mitochondrion	85.71	94.07
TraesCS3A01G136600.1	Wheat	cytosol, peroxisome, plastid	86.1	92.53
TraesCS3D01G137500.1	Wheat	cytosol	77.61	84.45
Os01t0205600-01	Rice	cytosol, peroxisome, plastid	70.66	74.09
EES02280	Sorghum	cytosol	67.18	72.2
Zm00001d039408_P001	Maize	cytosol, mitochondrion, peroxisome	66.41	71.67
GSMUA_Achr10P...	Banana	peroxisome	49.03	52.26
VIT_05s0049g00180.t01	Wine grape	mitochondrion, peroxisome, plastid	47.1	51.26
VIT_05s0049g00160.t01	Wine grape	mitochondrion, peroxisome, plastid	46.33	50.42
AT4G14430.1	Thale cress	peroxisome	44.79	48.33
KRH01629	Soybean	cytosol, peroxisome, plastid	44.02	47.9
TraesCS1D01G352100.1	Wheat	peroxisome	44.02	47.7
Bra039860.1-P	Field mustard	cytosol, mitochondrion, plastid	44.02	47.5
CDY47152	Canola	cytosol, mitochondrion, plastid	43.63	47.08
CDY12468	Canola	cytosol, mitochondrion, plastid	43.63	47.08
GSMUA_Achr1P13680_001	Banana	cytosol, peroxisome, plastid	44.79	46.77
AT4G14440.1	Thale cress	cytosol	42.86	46.64
TraesCS1D01G352000.1	Wheat	peroxisome	43.63	46.31
Bra033483.1-P	Field mustard	peroxisome	41.7	45.38
CDY23155	Canola	peroxisome	41.7	45.38
PGSC0003DMT400041985	Potato	extracellular	41.7	45.19
CDY12773	Canola	peroxisome	41.31	44.96
KRG89978	Soybean	cytosol	23.55	44.85
VIT_13s0019g00710.t01	Wine grape	cytosol, peroxisome, plastid	41.7	44.81
Solyc06g053670.1.1	Tomato	plastid	41.31	44.77
VIT_13s0019g00690.t01	Wine grape	cytosol, peroxisome, plastid	41.31	44.58
CDY16410	Canola	mitochondrion	40.93	44.35
PGSC0003DMT400050550	Potato	peroxisome	38.61	43.67
KRH21512	Soybean	cytosol, peroxisome, plastid	40.54	43.57
CDY67294	Canola	peroxisome	40.15	43.51
Bra022473.1-P	Field mustard	cytosol	40.15	43.51
CDY60945	Canola	cytosol, mitochondrion, peroxisome, plastid	39.77	43.1
PGSC0003DMT400041986	Potato	cytosol, mitochondrion, peroxisome, plastid	16.6	43.0
KRH31723	Soybean	peroxisome, plasma membrane, plastid	41.31	42.97
AT1G65520.1	Thale cress	peroxisome	39.77	42.92
Solyc01g091520.2.1	Tomato	cytosol, mitochondrion, peroxisome	38.61	40.32
PGSC0003DMT400033247	Potato	cytosol, mitochondrion, peroxisome	38.22	39.92
Bra036189.1-P	Field mustard	cytosol, nucleus, peroxisome	40.15	36.88
CDY19969	Canola	cytosol, nucleus, peroxisome	40.15	36.88
Solyc05g010720.2.1	Tomato	peroxisome	36.68	21.16

Protein Annotations

EnsemblPlants:TraesCS3D01G137300.1	EnsemblPlantsGene:TraesCS3D01G137300	Gene3D:3.90.226.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	InterPro:ClpP/crotonase-like_dom_sf	InterPro:Enoyl-CoA_hydra/iso	PANTHER:PTHR11941	PANTHER:PTHR11941:SF84	PFAM:PF00378
SEG:seg	SUPFAM:SSF52096	TIGR:cd06558	MapMan:5.7.3.5.1	:	:

Description

No Description!

Coordinates

chr3D:-:95956691..95957470

Molecular Weight (calculated)

27240.0 Da

IEP (calculated)

10.012

GRAVY (calculated)

0.113

Length

259 amino acids

Sequence
(BLAST)

001: MMAGYGCLNR NSITSRSPNP RMDKRTMCTV EKRGRVHLIT LTGAGEHRLS PSLISALRSA LATVRASPSA GALVLAAEGK YFSNGFDQAW ARTVPPHLHD
101: SMRGAFRALV ADLLALPMPS VAAVTGHAAA AGCALALAHD SVVMRASRGF LYMSEVDVGL KFADYFGELL RQKVPDAAAR RDMVLGGNKM TAAEAVRLGI
201: VDAAADGGVE DVVAAAVAAA EGLAARGWDG EVVAEIRKAM WPAVWGKVKD HPAAARPRL

Best Arabidopsis Sequence Match ( AT1G65520.1 )
(BLAST)

001: MCSLEKRDRL FILKLTGDGE HRLNPTLLDS LRSTINQIRS DPSFSQSVLI TTSDGKFFSN GYDLALAESN PSLSVVMDAK LRSLVADLIS LPMPTIAAVT
101: GHASAAGCIL AMSHDYVLMR RDRGFLYMSE LDIELIVPAW FMAVIRGKIG SPAARRDVML TAAKVTADVG VKMGIVDSAY GSAAETVEAA IKLGEEIVQR
201: GGDGHVYGKM RESLLREVLI HTIGEYESGS SVVRSTGSKL

Arabidopsis Description

ECI1Enoyl-CoA delta isomerase 1, peroxisomal [Source:UniProtKB/Swiss-Prot;Acc:O04469]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.