Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- peroxisome 2
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d039408_P001 | Maize | cytosol, mitochondrion, peroxisome | 88.8 | 89.17 |
| TraesCS3D01G137500.1 | Wheat | cytosol | 73.86 | 74.79 |
| TraesCS3B01G154500.1 | Wheat | cytosol | 73.03 | 73.64 |
| TraesCS3B01G154300.1 | Wheat | mitochondrion | 71.37 | 72.88 |
| TraesCS3A01G136600.1 | Wheat | cytosol, peroxisome, plastid | 71.78 | 71.78 |
| HORVU3Hr1G026030.1 | Barley | mitochondrion, peroxisome | 71.78 | 71.19 |
| HORVU3Hr1G026050.3 | Barley | cytosol, mitochondrion, peroxisome | 70.54 | 71.13 |
| Os01t0205600-01 | Rice | cytosol, peroxisome, plastid | 70.12 | 68.42 |
| EES02279 | Sorghum | mitochondrion, plastid | 69.71 | 67.47 |
| TraesCS3D01G137300.1 | Wheat | plastid | 72.2 | 67.18 |
| TraesCS3A01G136700.1 | Wheat | cytosol, mitochondrion, peroxisome | 73.03 | 66.92 |
| GSMUA_Achr10P... | Banana | peroxisome | 49.79 | 49.38 |
| VIT_05s0049g00180.t01 | Wine grape | mitochondrion, peroxisome, plastid | 46.06 | 46.64 |
| VIT_05s0049g00160.t01 | Wine grape | mitochondrion, peroxisome, plastid | 45.23 | 45.8 |
| EES18539 | Sorghum | mitochondrion, peroxisome, plastid | 45.23 | 45.04 |
| Bra039860.1-P | Field mustard | cytosol, mitochondrion, plastid | 43.98 | 44.17 |
| AT4G14430.1 | Thale cress | peroxisome | 43.57 | 43.75 |
| CDY47152 | Canola | cytosol, mitochondrion, plastid | 43.57 | 43.75 |
| CDY12468 | Canola | cytosol, mitochondrion, plastid | 43.57 | 43.75 |
| PGSC0003DMT400041985 | Potato | extracellular | 43.15 | 43.51 |
| KRH01629 | Soybean | cytosol, peroxisome, plastid | 42.74 | 43.28 |
| Solyc06g053670.1.1 | Tomato | plastid | 42.74 | 43.1 |
| AT4G14440.1 | Thale cress | cytosol | 41.49 | 42.02 |
| GSMUA_Achr1P13680_001 | Banana | cytosol, peroxisome, plastid | 43.15 | 41.94 |
| KRG89978 | Soybean | cytosol | 23.65 | 41.91 |
| CDY67294 | Canola | peroxisome | 41.49 | 41.84 |
| CDY16410 | Canola | mitochondrion | 41.08 | 41.42 |
| KRH31723 | Soybean | peroxisome, plasma membrane, plastid | 42.74 | 41.37 |
| KRH21512 | Soybean | cytosol, peroxisome, plastid | 41.08 | 41.08 |
| AT1G65520.1 | Thale cress | peroxisome | 40.66 | 40.83 |
| Bra033483.1-P | Field mustard | peroxisome | 40.25 | 40.76 |
| CDY23155 | Canola | peroxisome | 40.25 | 40.76 |
| Bra022473.1-P | Field mustard | cytosol | 40.25 | 40.59 |
| CDY12773 | Canola | peroxisome | 39.83 | 40.34 |
| VIT_13s0019g00710.t01 | Wine grape | cytosol, peroxisome, plastid | 40.25 | 40.25 |
| PGSC0003DMT400050550 | Potato | peroxisome | 38.17 | 40.17 |
| CDY60945 | Canola | cytosol, mitochondrion, peroxisome, plastid | 39.83 | 40.17 |
| PGSC0003DMT400041986 | Potato | cytosol, mitochondrion, peroxisome, plastid | 16.6 | 40.0 |
| VIT_13s0019g00690.t01 | Wine grape | cytosol, peroxisome, plastid | 39.83 | 40.0 |
| PGSC0003DMT400033247 | Potato | cytosol, mitochondrion, peroxisome | 38.59 | 37.5 |
| Solyc01g091520.2.1 | Tomato | cytosol, mitochondrion, peroxisome | 38.17 | 37.1 |
| CDY19969 | Canola | cytosol, nucleus, peroxisome | 41.08 | 35.11 |
| Bra036189.1-P | Field mustard | cytosol, nucleus, peroxisome | 41.08 | 35.11 |
| Solyc05g010720.2.1 | Tomato | peroxisome | 35.27 | 18.93 |
Protein Annotations
| Gene3D:3.90.226.10 | MapMan:5.7.3.5.1 | EntrezGene:8084317 | UniProt:C5XL69 | InterPro:ClpP/crotonase-like_dom_sf | EnsemblPlants:EES02280 |
| ProteinID:EES02280 | ProteinID:EES02280.1 | InterPro:Enoyl-CoA_hydra/iso | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004165 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005777 | GO:GO:0008150 |
| GO:GO:0008152 | PFAM:PF00378 | PANTHER:PTHR11941 | PANTHER:PTHR11941:SF84 | EnsemblPlantsGene:SORBI_3003G025000 | SUPFAM:SSF52096 |
| unigene:Sbi.10709 | UniParc:UPI0001A84EFA | RefSeq:XP_002457160.1 | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr3:-:2119063..2120414
Molecular Weight (calculated)
25099.3 Da
IEP (calculated)
8.283
GRAVY (calculated)
0.190
Length
241 amino acids
Sequence
(BLAST)
(BLAST)
001: MATNKDLCTV ERRGRVHLIT ITGAGEHRLN PDLLAALRSA VAASAGAGAL VLAAEGKFFS NGFDQAWART APPHLHSTMD GGLLALVADL LALRMPTVAA
101: VTGHAAAAGC ALALAHDAVL MRRTRGFLYM SEVDVGIKFV DFVAAVLRDK VPDAAARRDL VMRGDRVAAA EAVRRGLVDA AVDGGPEDVV AAAVAEAERL
201: AARGWDGEAV AEIRKAAWPQ LWGQVKDHGA GPAPAGVRPR L
101: VTGHAAAAGC ALALAHDAVL MRRTRGFLYM SEVDVGIKFV DFVAAVLRDK VPDAAARRDL VMRGDRVAAA EAVRRGLVDA AVDGGPEDVV AAAVAEAERL
201: AARGWDGEAV AEIRKAAWPQ LWGQVKDHGA GPAPAGVRPR L
001: MCTLEKRGDL FLLTLTGDGE HRFHPDTIAT ILSLLEQAKS QSTRGSILIT TANGKFFSNG FDLAWAQTAG SKTGAANRLH QMVESFKPVV AALLDLPMPT
101: IAALNGHAAA AGLILALSHD YVFMRKDRGV LYMSEVDIGL SMPDYFSALV RAKIGTSAAR RELLLSGKKI RGEEAVGLGI VDSAAYDSEE GVVVASVRLG
201: EKLAAKKWSG EVYASIRKSL YPELCGILGL ETRVFATPKL
101: IAALNGHAAA AGLILALSHD YVFMRKDRGV LYMSEVDIGL SMPDYFSALV RAKIGTSAAR RELLLSGKKI RGEEAVGLGI VDSAAYDSEE GVVVASVRLG
201: EKLAAKKWSG EVYASIRKSL YPELCGILGL ETRVFATPKL
Arabidopsis Description
ECI2PEC12 [Source:UniProtKB/TrEMBL;Acc:A0A178UV55]
SUBAcon: [peroxisome]
SUBAcon: [peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.