Factsheet for TraesCS3B01G154300.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 4
peroxisome 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, peroxisome, plastid
iPSORT:	mitochondrion
MultiLoc:	peroxisome
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS1A01G349200.1
TraesCS1A01G427400.1
TraesCS1B01G363700.1
TraesCS1B01G462300.1
TraesCS1D01G352000.1
TraesCS1D01G352100.1
TraesCS1D01G437100.1
TraesCS3A01G136600.1
TraesCS3A01G136700.1
TraesCS3A01G143000.1
TraesCS3A01G221800.1
TraesCS3B01G154300.1
TraesCS3B01G154500.1
TraesCS3B01G162100.1
TraesCS3B01G251600.1
TraesCS3D01G137300.1
TraesCS3D01G137500.1
TraesCS3D01G144600.1
TraesCS3D01G231300.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G14430.1	TraesCS1A01G349200.1	AT4G14440.1	21798944
AT4G14430.1	TraesCS1B01G363700.1	AT4G14440.1	21798944
AT4G14430.1	TraesCS1D01G352000.1	AT4G14440.1	21798944
AT4G14430.1	TraesCS1D01G352100.1	AT4G14440.1	21798944
AT4G14430.1	TraesCS3A01G136600.1	AT4G14440.1	21798944
AT4G14430.1	TraesCS3A01G136700.1	AT4G14440.1	21798944
AT4G14430.1	TraesCS3B01G154300.1	AT4G14440.1	21798944
AT4G14430.1	TraesCS3B01G154500.1	AT4G14440.1	21798944
AT4G14430.1	TraesCS3D01G137300.1	AT4G14440.1	21798944
AT4G14430.1	TraesCS3D01G137500.1	AT4G14440.1	21798944
AT4G14440.1	TraesCS1A01G427400.1	AT2G42580.1	19000166
AT4G14440.1	TraesCS1B01G462300.1	AT2G42580.1	19000166
AT4G14440.1	TraesCS1D01G437100.1	AT2G42580.1	19000166
AT4G14440.1	TraesCS3A01G143000.1	AT2G42580.1	19000166
AT4G14440.1	TraesCS3A01G221800.1	AT2G42580.1	19000166
AT4G14440.1	TraesCS3B01G162100.1	AT2G42580.1	19000166
AT4G14440.1	TraesCS3B01G251600.1	AT2G42580.1	19000166
AT4G14440.1	TraesCS3D01G144600.1	AT2G42580.1	19000166
AT4G14440.1	TraesCS3D01G231300.1	AT2G42580.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G136600.1	Wheat	cytosol, peroxisome, plastid	94.07	92.12
HORVU3Hr1G026030.1	Barley	mitochondrion, peroxisome	94.49	91.77
TraesCS3D01G137300.1	Wheat	plastid	94.07	85.71
TraesCS3B01G154500.1	Wheat	cytosol	81.78	80.75
Os01t0205600-01	Rice	cytosol, peroxisome, plastid	76.27	72.87
EES02280	Sorghum	cytosol	72.88	71.37
Zm00001d039408_P001	Maize	cytosol, mitochondrion, peroxisome	72.46	71.25
GSMUA_Achr10P...	Banana	peroxisome	53.39	51.85
VIT_05s0049g00180.t01	Wine grape	mitochondrion, peroxisome, plastid	50.42	50.0
VIT_05s0049g00160.t01	Wine grape	mitochondrion, peroxisome, plastid	49.58	49.16
AT4G14430.1	Thale cress	peroxisome	48.31	47.5
TraesCS1B01G363700.1	Wheat	mitochondrion, peroxisome	48.31	46.72
Bra039860.1-P	Field mustard	cytosol, mitochondrion, plastid	47.46	46.67
KRH01629	Soybean	cytosol, peroxisome, plastid	47.03	46.64
CDY47152	Canola	cytosol, mitochondrion, plastid	47.03	46.25
CDY12468	Canola	cytosol, mitochondrion, plastid	47.03	46.25
AT4G14440.1	Thale cress	cytosol	46.19	45.8
Bra033483.1-P	Field mustard	peroxisome	45.34	44.96
CDY23155	Canola	peroxisome	45.34	44.96
GSMUA_Achr1P13680_001	Banana	cytosol, peroxisome, plastid	47.03	44.76
CDY12773	Canola	peroxisome	44.92	44.54
Solyc06g053670.1.1	Tomato	plastid	44.92	44.35
KRG89978	Soybean	cytosol	25.42	44.12
VIT_13s0019g00710.t01	Wine grape	cytosol, peroxisome, plastid	44.92	43.98
PGSC0003DMT400041985	Potato	extracellular	44.49	43.93
VIT_13s0019g00690.t01	Wine grape	cytosol, peroxisome, plastid	44.49	43.75
CDY16410	Canola	mitochondrion	43.64	43.1
PGSC0003DMT400050550	Potato	peroxisome	41.53	42.79
KRH21512	Soybean	cytosol, peroxisome, plastid	43.22	42.32
Bra022473.1-P	Field mustard	cytosol	42.8	42.26
CDY67294	Canola	peroxisome	42.8	42.26
KRH31723	Soybean	peroxisome, plasma membrane, plastid	44.49	42.17
AT1G65520.1	Thale cress	peroxisome	42.8	42.08
CDY60945	Canola	cytosol, mitochondrion, peroxisome, plastid	42.37	41.84
PGSC0003DMT400041986	Potato	cytosol, mitochondrion, peroxisome, plastid	17.37	41.0
PGSC0003DMT400033247	Potato	cytosol, mitochondrion, peroxisome	41.95	39.92
Solyc01g091520.2.1	Tomato	cytosol, mitochondrion, peroxisome	41.95	39.92
Bra036189.1-P	Field mustard	cytosol, nucleus, peroxisome	42.8	35.82
CDY19969	Canola	cytosol, nucleus, peroxisome	42.8	35.82
Solyc05g010720.2.1	Tomato	peroxisome	38.98	20.49

Protein Annotations

EnsemblPlants:TraesCS3B01G154300.1	EnsemblPlantsGene:TraesCS3B01G154300	Gene3D:3.90.226.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	InterPro:ClpP/crotonase-like_dom_sf	InterPro:Enoyl-CoA_hydra/iso	PANTHER:PTHR11941	PANTHER:PTHR11941:SF84	PFAM:PF00378
SEG:seg	SUPFAM:SSF52096	TIGR:cd06558	MapMan:5.7.3.5.1	:	:

Description

No Description!

Coordinates

chr3B:-:146890726..146891436

Molecular Weight (calculated)

24600.9 Da

IEP (calculated)

9.589

GRAVY (calculated)

0.246

Length

236 amino acids

Sequence
(BLAST)

001: MCTVEKRGRV HLITLTGAGE HRLSPSLISA LRTAVATVRA SPGAGALVLA AEGKYFSNGF DQAWARTVPP HLHDSMRGAF RALVADLLAL PMPTVAAVTG
101: HAAAAGCALA LAHDSVVMRA SRGFLYMSEV DVGLKFADYF GELLRQKVPN AAARRDMVLG GKKMTAAEAV RLGIVDAAAD GGVEDVVAAG VAAAEVLATR
201: GWDGEIVAEI RKAMWPAVWG KVKDHGAEAA AARPRL

Best Arabidopsis Sequence Match ( AT1G65520.1 )
(BLAST)

001: MCSLEKRDRL FILKLTGDGE HRLNPTLLDS LRSTINQIRS DPSFSQSVLI TTSDGKFFSN GYDLALAESN PSLSVVMDAK LRSLVADLIS LPMPTIAAVT
101: GHASAAGCIL AMSHDYVLMR RDRGFLYMSE LDIELIVPAW FMAVIRGKIG SPAARRDVML TAAKVTADVG VKMGIVDSAY GSAAETVEAA IKLGEEIVQR
201: GGDGHVYGKM RESLLREVLI HTIGEYESGS SVVRSTGSKL

Arabidopsis Description

ECI1Enoyl-CoA delta isomerase 1, peroxisomal [Source:UniProtKB/Swiss-Prot;Acc:O04469]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.