CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, peroxisome, plastid, cytosol

Predictor Summary:

plastid 2
peroxisome 1
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY16410	Canola	mitochondrion	96.23	96.23
CDY67294	Canola	peroxisome	84.94	84.94
AT1G65520.1	Thale cress	peroxisome	79.08	78.75
CDY19969	Canola	cytosol, nucleus, peroxisome	83.68	70.92
PGSC0003DMT400050550	Potato	peroxisome	55.23	57.64
KRH01629	Soybean	cytosol, peroxisome, plastid	55.65	55.88
KRG89978	Soybean	cytosol	31.38	55.15
VIT_13s0019g00710.t01	Wine grape	cytosol, peroxisome, plastid	54.39	53.94
Solyc01g091520.2.1	Tomato	cytosol, mitochondrion, peroxisome	55.65	53.63
VIT_13s0019g00690.t01	Wine grape	cytosol, peroxisome, plastid	53.56	53.33
PGSC0003DMT400033247	Potato	cytosol, mitochondrion, peroxisome	54.39	52.42
GSMUA_Achr10P...	Banana	peroxisome	49.79	48.97
CDY47152	Canola	cytosol, mitochondrion, plastid	48.54	48.33
CDY12468	Canola	cytosol, mitochondrion, plastid	48.54	48.33
GSMUA_Achr1P13680_001	Banana	cytosol, peroxisome, plastid	48.12	46.37
EES18539	Sorghum	mitochondrion, peroxisome, plastid	45.19	44.63
Zm00001d038755_P001	Maize	extracellular, mitochondrion	44.77	44.21
Os05t0529200-01	Rice	cytosol, peroxisome, plastid	44.35	43.8
CDY23155	Canola	peroxisome	43.51	43.7
HORVU1Hr1G081470.3	Barley	peroxisome	44.35	43.44
TraesCS3A01G136600.1	Wheat	cytosol, peroxisome, plastid	43.51	43.15
TraesCS1B01G363700.1	Wheat	mitochondrion, peroxisome	43.93	43.03
TraesCS1D01G352100.1	Wheat	peroxisome	42.68	42.68
TraesCS1A01G349200.1	Wheat	mitochondrion, peroxisome	43.51	42.62
TraesCS3B01G154300.1	Wheat	mitochondrion	41.84	42.37
TraesCS1D01G352000.1	Wheat	peroxisome	43.1	42.21
HORVU3Hr1G026030.1	Barley	mitochondrion, peroxisome	42.68	41.98
CDY12773	Canola	peroxisome	41.42	41.6
TraesCS3D01G137500.1	Wheat	cytosol	40.59	40.76
HORVU3Hr1G026050.3	Barley	cytosol, mitochondrion, peroxisome	40.59	40.59
TraesCS3B01G154500.1	Wheat	cytosol	40.59	40.59
Zm00001d039408_P001	Maize	cytosol, mitochondrion, peroxisome	40.17	40.0
EES02280	Sorghum	cytosol	40.17	39.83
TraesCS3D01G137300.1	Wheat	plastid	43.1	39.77
Os01t0205600-01	Rice	cytosol, peroxisome, plastid	41.0	39.68
Zm00001d008892_P001	Maize	cytosol, mitochondrion, peroxisome	40.17	39.67
EES02279	Sorghum	mitochondrion, plastid	41.0	39.36
TraesCS3A01G136700.1	Wheat	cytosol, mitochondrion, peroxisome	40.59	36.88
Zm00001d039741_P001	Maize	plastid	24.69	36.65
HORVU1Hr1G082330.11	Barley	plastid	14.64	28.69
Solyc05g010720.2.1	Tomato	peroxisome	52.72	28.06

Protein Annotations

EnsemblPlants:CDY60945	EnsemblPlantsGene:GSBRNA2T00030315001	Gene3D:3.90.226.10	GO:A0A078J485	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	InterPro:ClpP/crotonase-like_dom_sf	InterPro:Enoyl-CoA_hydra/iso	PANTHER:PTHR11941	PANTHER:PTHR11941:SF84
PFAM:PF00378	ProteinID:CDY60945	ProteinID:CDY60945.1	SUPFAM:SSF52096	UniParc:UPI0004EBA121	UniProt:A0A078J485
MapMan:5.7.3.5.1	:	:	:	:	:

Description

BnaC02g45280DBnaC02g45280D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J485]

Coordinates

chrLK033935:-:32038..32881

Molecular Weight (calculated)

25799.3 Da

IEP (calculated)

7.768

GRAVY (calculated)

0.030

Length

239 amino acids

Sequence
(BLAST)

001: MCTLEKRGRL FLLKLTGDGE HRLNPTLLDN IRSAITQIRS DPSSSQSVLI TTSDGKFFSN GYDLALAASD PPLRAVMAAK LQSLVADLIS LPMPTIAAVT
101: GHASAAGFLL AMSHDYILMR RDRGFLYMSE LDIELVLPAW FMSMIRMKVV SPAAKRDVAL TAEKITADRG LEMGIVDSSH GSAGETVEAA VKLGEEIVRR
201: GADGHVYGRM RETLLREVLH AIGSNESASN GVRNSGSKL

Best Arabidopsis Sequence Match ( AT1G65520.1 )
(BLAST)

001: MCSLEKRDRL FILKLTGDGE HRLNPTLLDS LRSTINQIRS DPSFSQSVLI TTSDGKFFSN GYDLALAESN PSLSVVMDAK LRSLVADLIS LPMPTIAAVT
101: GHASAAGCIL AMSHDYVLMR RDRGFLYMSE LDIELIVPAW FMAVIRGKIG SPAARRDVML TAAKVTADVG VKMGIVDSAY GSAAETVEAA IKLGEEIVQR
201: GGDGHVYGKM RESLLREVLI HTIGEYESGS SVVRSTGSKL

Arabidopsis Description

ECI1Enoyl-CoA delta isomerase 1, peroxisomal [Source:UniProtKB/Swiss-Prot;Acc:O04469]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.