Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, plastid, cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- peroxisome 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_13s0019g00710.t01 | Wine grape | cytosol, peroxisome, plastid | 92.08 | 91.7 |
| KRH01629 | Soybean | cytosol, peroxisome, plastid | 59.58 | 60.08 |
| KRG89978 | Soybean | cytosol | 32.5 | 57.35 |
| CDY67294 | Canola | peroxisome | 56.25 | 56.49 |
| AT1G65520.1 | Thale cress | peroxisome | 55.83 | 55.83 |
| PGSC0003DMT400033247 | Potato | cytosol, mitochondrion, peroxisome | 57.5 | 55.65 |
| PGSC0003DMT400050550 | Potato | peroxisome | 52.92 | 55.46 |
| CDY16410 | Canola | mitochondrion | 54.17 | 54.39 |
| VIT_05s0049g00180.t01 | Wine grape | mitochondrion, peroxisome, plastid | 53.33 | 53.78 |
| Bra022473.1-P | Field mustard | cytosol | 53.33 | 53.56 |
| CDY60945 | Canola | cytosol, mitochondrion, peroxisome, plastid | 53.33 | 53.56 |
| Solyc01g091520.2.1 | Tomato | cytosol, mitochondrion, peroxisome | 55.0 | 53.23 |
| VIT_05s0049g00160.t01 | Wine grape | mitochondrion, peroxisome, plastid | 51.67 | 52.1 |
| GSMUA_Achr10P... | Banana | peroxisome | 48.33 | 47.74 |
| GSMUA_Achr1P13680_001 | Banana | cytosol, peroxisome, plastid | 49.17 | 47.58 |
| Bra036189.1-P | Field mustard | cytosol, nucleus, peroxisome | 55.83 | 47.52 |
| CDY19969 | Canola | cytosol, nucleus, peroxisome | 55.42 | 47.16 |
| TraesCS3D01G137500.1 | Wheat | cytosol | 44.17 | 44.54 |
| TraesCS3B01G154300.1 | Wheat | mitochondrion | 43.75 | 44.49 |
| HORVU3Hr1G026050.3 | Barley | cytosol, mitochondrion, peroxisome | 44.17 | 44.35 |
| TraesCS1B01G363700.1 | Wheat | mitochondrion, peroxisome | 45.0 | 44.26 |
| TraesCS3A01G136600.1 | Wheat | cytosol, peroxisome, plastid | 44.17 | 43.98 |
| HORVU1Hr1G081470.3 | Barley | peroxisome | 44.17 | 43.44 |
| HORVU3Hr1G026030.1 | Barley | mitochondrion, peroxisome | 43.75 | 43.21 |
| TraesCS3B01G154500.1 | Wheat | cytosol | 42.92 | 43.1 |
| TraesCS1D01G352000.1 | Wheat | peroxisome | 43.75 | 43.03 |
| TraesCS1A01G349200.1 | Wheat | mitochondrion, peroxisome | 43.33 | 42.62 |
| Zm00001d008892_P001 | Maize | cytosol, mitochondrion, peroxisome | 42.5 | 42.15 |
| EES02279 | Sorghum | mitochondrion, plastid | 43.33 | 41.77 |
| Os05t0529200-01 | Rice | cytosol, peroxisome, plastid | 42.08 | 41.74 |
| Zm00001d038755_P001 | Maize | extracellular, mitochondrion | 42.08 | 41.74 |
| Os01t0205600-01 | Rice | cytosol, peroxisome, plastid | 42.92 | 41.7 |
| TraesCS3D01G137300.1 | Wheat | plastid | 44.58 | 41.31 |
| EES18539 | Sorghum | mitochondrion, peroxisome, plastid | 40.83 | 40.5 |
| TraesCS1D01G352100.1 | Wheat | peroxisome | 40.0 | 40.17 |
| Zm00001d039408_P001 | Maize | cytosol, mitochondrion, peroxisome | 40.0 | 40.0 |
| EES02280 | Sorghum | cytosol | 40.0 | 39.83 |
| TraesCS3A01G136700.1 | Wheat | cytosol, mitochondrion, peroxisome | 42.92 | 39.16 |
| Zm00001d039741_P001 | Maize | plastid | 22.92 | 34.16 |
| HORVU1Hr1G082330.11 | Barley | plastid | 16.67 | 32.79 |
| Solyc05g010720.2.1 | Tomato | peroxisome | 52.5 | 28.06 |
Protein Annotations
| EntrezGene:100241037 | wikigene:100241037 | Gene3D:3.90.226.10 | MapMan:5.7.3.5.1 | EMBL:AM430425 | ProteinID:CAN82362 |
| ProteinID:CAN82362.1 | ProteinID:CBI31703 | ProteinID:CBI31703.3 | InterPro:ClpP/crotonase-like_dom_sf | UniProt:D7TLW6 | InterPro:Enoyl-CoA_hydra/iso |
| EMBL:FN595998 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004165 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005777 | GO:GO:0008150 | GO:GO:0008152 | EntrezGene:LOC100241037 |
| wikigene:LOC100241037 | PFAM:PF00378 | PANTHER:PTHR11941 | PANTHER:PTHR11941:SF84 | SUPFAM:SSF52096 | UniParc:UPI000198474B |
| ArrayExpress:VIT_13s0019g00690 | EnsemblPlantsGene:VIT_13s0019g00690 | EnsemblPlants:VIT_13s0019g00690.t01 | RefSeq:XP_002279179 | RefSeq:XP_002279179.1 | SEG:seg |
Description
No Description!
Coordinates
chr13:-:2632418..2634497
Molecular Weight (calculated)
26489.2 Da
IEP (calculated)
8.494
GRAVY (calculated)
0.087
Length
240 amino acids
Sequence
(BLAST)
(BLAST)
001: MCSLEKRGNI FILTLTGPGE HRLNPTLLDA ISAALSRVRA ESSMSFALIT TAEGKFFSNG YDLAWASASG VFLDRSKLMS SKLRSLVADL ISLPMPTIAA
101: ISGHCSAAAA IIALSHDYVL MRNDRGFIYM PELDIGIKIP DWWFVALIRS KIGAPRSQRE LMLRAAKLTA HDALNWGIID SAHNSTEETV RAAIRLGEEL
201: VGRKWDGHVY AQIRMRMLAD VFDKVGCDES VEVSHTRTRL
101: ISGHCSAAAA IIALSHDYVL MRNDRGFIYM PELDIGIKIP DWWFVALIRS KIGAPRSQRE LMLRAAKLTA HDALNWGIID SAHNSTEETV RAAIRLGEEL
201: VGRKWDGHVY AQIRMRMLAD VFDKVGCDES VEVSHTRTRL
001: MCSLEKRDRL FILKLTGDGE HRLNPTLLDS LRSTINQIRS DPSFSQSVLI TTSDGKFFSN GYDLALAESN PSLSVVMDAK LRSLVADLIS LPMPTIAAVT
101: GHASAAGCIL AMSHDYVLMR RDRGFLYMSE LDIELIVPAW FMAVIRGKIG SPAARRDVML TAAKVTADVG VKMGIVDSAY GSAAETVEAA IKLGEEIVQR
201: GGDGHVYGKM RESLLREVLI HTIGEYESGS SVVRSTGSKL
101: GHASAAGCIL AMSHDYVLMR RDRGFLYMSE LDIELIVPAW FMAVIRGKIG SPAARRDVML TAAKVTADVG VKMGIVDSAY GSAAETVEAA IKLGEEIVQR
201: GGDGHVYGKM RESLLREVLI HTIGEYESGS SVVRSTGSKL
Arabidopsis Description
ECI1Enoyl-CoA delta isomerase 1, peroxisomal [Source:UniProtKB/Swiss-Prot;Acc:O04469]
SUBAcon: [peroxisome]
SUBAcon: [peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.