Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, plastid, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- peroxisome 2
- plastid 2
- mitochondrion 1
- cytosol 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
Inferred distinct locusB in Crop
locusB | locations |
---|---|
Os01t0205600-01 | |
Os01t0218200-00 | |
Os05t0210600-01 | |
Os05t0529200-01 | |
Os05t0587300-01 |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
HORVU3Hr1G026050.3 | Barley | cytosol, mitochondrion, peroxisome | 74.49 | 76.99 |
TraesCS3A01G136600.1 | Wheat | cytosol, peroxisome, plastid | 74.9 | 76.76 |
TraesCS3B01G154300.1 | Wheat | mitochondrion | 72.87 | 76.27 |
TraesCS3D01G137500.1 | Wheat | cytosol | 72.87 | 75.63 |
HORVU3Hr1G026030.1 | Barley | mitochondrion, peroxisome | 73.68 | 74.9 |
TraesCS3B01G154500.1 | Wheat | cytosol | 72.47 | 74.9 |
Zm00001d039408_P001 | Maize | cytosol, mitochondrion, peroxisome | 69.23 | 71.25 |
TraesCS3D01G137300.1 | Wheat | plastid | 74.09 | 70.66 |
EES02280 | Sorghum | cytosol | 68.42 | 70.12 |
TraesCS3A01G136700.1 | Wheat | cytosol, mitochondrion, peroxisome | 74.49 | 69.96 |
GSMUA_Achr10P... | Banana | peroxisome | 50.2 | 51.03 |
GSMUA_Achr1P13680_001 | Banana | cytosol, peroxisome, plastid | 46.15 | 45.97 |
Os05t0529200-01 | Rice | cytosol, peroxisome, plastid | 44.94 | 45.87 |
VIT_05s0049g00180.t01 | Wine grape | mitochondrion, peroxisome, plastid | 43.72 | 45.38 |
KRG89978 | Soybean | cytosol | 24.7 | 44.85 |
Solyc06g053670.1.1 | Tomato | plastid | 42.91 | 44.35 |
VIT_05s0049g00160.t01 | Wine grape | mitochondrion, peroxisome, plastid | 42.51 | 44.12 |
KRH01629 | Soybean | cytosol, peroxisome, plastid | 42.51 | 44.12 |
VIT_13s0019g00710.t01 | Wine grape | cytosol, peroxisome, plastid | 42.51 | 43.57 |
PGSC0003DMT400041985 | Potato | extracellular | 42.11 | 43.51 |
Bra039860.1-P | Field mustard | cytosol, mitochondrion, plastid | 42.11 | 43.33 |
CDY47152 | Canola | cytosol, mitochondrion, plastid | 41.7 | 42.92 |
AT4G14430.1 | Thale cress | peroxisome | 41.7 | 42.92 |
VIT_13s0019g00690.t01 | Wine grape | cytosol, peroxisome, plastid | 41.7 | 42.92 |
CDY12468 | Canola | cytosol, mitochondrion, plastid | 41.7 | 42.92 |
PGSC0003DMT400050550 | Potato | peroxisome | 39.68 | 42.79 |
CDY67294 | Canola | peroxisome | 40.89 | 42.26 |
CDY16410 | Canola | mitochondrion | 40.89 | 42.26 |
AT4G14440.1 | Thale cress | cytosol | 40.49 | 42.02 |
KRH21512 | Soybean | cytosol, peroxisome, plastid | 40.89 | 41.91 |
Bra022473.1-P | Field mustard | cytosol | 40.08 | 41.42 |
KRH31723 | Soybean | peroxisome, plasma membrane, plastid | 41.7 | 41.37 |
CDY60945 | Canola | cytosol, mitochondrion, peroxisome, plastid | 39.68 | 41.0 |
Bra033483.1-P | Field mustard | peroxisome | 39.27 | 40.76 |
CDY12773 | Canola | peroxisome | 38.87 | 40.34 |
CDY23155 | Canola | peroxisome | 38.87 | 40.34 |
AT1G65520.1 | Thale cress | peroxisome | 38.87 | 40.0 |
Solyc01g091520.2.1 | Tomato | cytosol, mitochondrion, peroxisome | 39.27 | 39.11 |
PGSC0003DMT400041986 | Potato | cytosol, mitochondrion, peroxisome, plastid | 15.79 | 39.0 |
PGSC0003DMT400033247 | Potato | cytosol, mitochondrion, peroxisome | 38.87 | 38.71 |
CDY19969 | Canola | cytosol, nucleus, peroxisome | 40.49 | 35.46 |
Bra036189.1-P | Field mustard | cytosol, nucleus, peroxisome | 40.49 | 35.46 |
Solyc05g010720.2.1 | Tomato | peroxisome | 36.03 | 19.82 |
Protein Annotations
Gene3D:3.90.226.10 | EntrezGene:4327088 | MapMan:5.7.3.5.1 | EMBL:AK067719 | ProteinID:BAA92965.1 | ProteinID:BAF04254.1 |
ProteinID:BAS70940.1 | InterPro:ClpP/crotonase-like_dom_sf | InterPro:Enoyl-CoA_hydra/iso | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004165 |
GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005777 | GO:GO:0008150 |
GO:GO:0008152 | EnsemblPlantsGene:Os01g0205600 | EnsemblPlants:Os01t0205600-01 | PFAM:PF00378 | PANTHER:PTHR11941 | PANTHER:PTHR11941:SF84 |
UniProt:Q9LEA0 | SUPFAM:SSF52096 | UniParc:UPI00000A7C76 | RefSeq:XP_015617787.1 | SEG:seg | : |
Description
Crotonase, core domain containing protein. (Os01t0205600-01)
Coordinates
chr1:+:5773300..5774176
Molecular Weight (calculated)
25588.9 Da
IEP (calculated)
6.247
GRAVY (calculated)
0.249
Length
247 amino acids
Sequence
(BLAST)
(BLAST)
001: MDTASLCTVE KRGAVHVITL TGAGEHRLGP PLLSALRSAV AAVRAAAAAG AGGALVIAGE GKYFSNGFDL DWARTVPAEL HASMGGAFRG LVADLLALPV
101: PTVAAVTGHA AAAGCALALA HDAVVMRASR GFLYMSEVDA GLKIVDFFAE LIRQKVPDAV NRRDLVLRGD KMTAADALRR GIVDAAVDGG VDDVVAAAVR
201: EAEALAARGW DGEIVAETRK AIWPELWAKV KDHATDEPPP PPPRPLL
101: PTVAAVTGHA AAAGCALALA HDAVVMRASR GFLYMSEVDA GLKIVDFFAE LIRQKVPDAV NRRDLVLRGD KMTAADALRR GIVDAAVDGG VDDVVAAAVR
201: EAEALAARGW DGEIVAETRK AIWPELWAKV KDHATDEPPP PPPRPLL
001: MCTLEKRGDL FLLTLTGEDE HRFHPDTIAS VLSLLEQAKS QSTKGSVLIT TGHGKFFSNG FDLAWAQSAG HGAIKRMHQM VKSFKPVLAA LLDLPMPTIA
101: ALNGHAAASG LMFALSHDYV FMRKDRGVLY MSEVDIGLPV PDYFSALVVA KVGSGIARRE LLLSGKKLKG EEAVALGIVD SAAHDSAEGV VEATVSLGES
201: LAAKKWNGEV YATIRKSLYP ELCRMVDLTA NNLATHNL
101: ALNGHAAASG LMFALSHDYV FMRKDRGVLY MSEVDIGLPV PDYFSALVVA KVGSGIARRE LLLSGKKLKG EEAVALGIVD SAAHDSAEGV VEATVSLGES
201: LAAKKWNGEV YATIRKSLYP ELCRMVDLTA NNLATHNL
Arabidopsis Description
ECI3Enoyl-CoA delta isomerase 3 [Source:UniProtKB/Swiss-Prot;Acc:O23300]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.