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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:
  • nucleus 1
  • peroxisome 2
  • plastid 2
  • mitochondrion 1
  • cytosol 1
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU3Hr1G026050.3 Barley cytosol, mitochondrion, peroxisome 74.49 76.99
TraesCS3A01G136600.1 Wheat cytosol, peroxisome, plastid 74.9 76.76
TraesCS3B01G154300.1 Wheat mitochondrion 72.87 76.27
TraesCS3D01G137500.1 Wheat cytosol 72.87 75.63
HORVU3Hr1G026030.1 Barley mitochondrion, peroxisome 73.68 74.9
TraesCS3B01G154500.1 Wheat cytosol 72.47 74.9
Zm00001d039408_P001 Maize cytosol, mitochondrion, peroxisome 69.23 71.25
TraesCS3D01G137300.1 Wheat plastid 74.09 70.66
EES02280 Sorghum cytosol 68.42 70.12
TraesCS3A01G136700.1 Wheat cytosol, mitochondrion, peroxisome 74.49 69.96
GSMUA_Achr10P... Banana peroxisome 50.2 51.03
GSMUA_Achr1P13680_001 Banana cytosol, peroxisome, plastid 46.15 45.97
Os05t0529200-01 Rice cytosol, peroxisome, plastid 44.94 45.87
VIT_05s0049g00180.t01 Wine grape mitochondrion, peroxisome, plastid 43.72 45.38
KRG89978 Soybean cytosol 24.7 44.85
Solyc06g053670.1.1 Tomato plastid 42.91 44.35
VIT_05s0049g00160.t01 Wine grape mitochondrion, peroxisome, plastid 42.51 44.12
KRH01629 Soybean cytosol, peroxisome, plastid 42.51 44.12
VIT_13s0019g00710.t01 Wine grape cytosol, peroxisome, plastid 42.51 43.57
PGSC0003DMT400041985 Potato extracellular 42.11 43.51
Bra039860.1-P Field mustard cytosol, mitochondrion, plastid 42.11 43.33
CDY47152 Canola cytosol, mitochondrion, plastid 41.7 42.92
AT4G14430.1 Thale cress peroxisome 41.7 42.92
VIT_13s0019g00690.t01 Wine grape cytosol, peroxisome, plastid 41.7 42.92
CDY12468 Canola cytosol, mitochondrion, plastid 41.7 42.92
PGSC0003DMT400050550 Potato peroxisome 39.68 42.79
CDY67294 Canola peroxisome 40.89 42.26
CDY16410 Canola mitochondrion 40.89 42.26
AT4G14440.1 Thale cress cytosol 40.49 42.02
KRH21512 Soybean cytosol, peroxisome, plastid 40.89 41.91
Bra022473.1-P Field mustard cytosol 40.08 41.42
KRH31723 Soybean peroxisome, plasma membrane, plastid 41.7 41.37
CDY60945 Canola cytosol, mitochondrion, peroxisome, plastid 39.68 41.0
Bra033483.1-P Field mustard peroxisome 39.27 40.76
CDY12773 Canola peroxisome 38.87 40.34
CDY23155 Canola peroxisome 38.87 40.34
AT1G65520.1 Thale cress peroxisome 38.87 40.0
Solyc01g091520.2.1 Tomato cytosol, mitochondrion, peroxisome 39.27 39.11
PGSC0003DMT400041986 Potato cytosol, mitochondrion, peroxisome, plastid 15.79 39.0
PGSC0003DMT400033247 Potato cytosol, mitochondrion, peroxisome 38.87 38.71
CDY19969 Canola cytosol, nucleus, peroxisome 40.49 35.46
Bra036189.1-P Field mustard cytosol, nucleus, peroxisome 40.49 35.46
Solyc05g010720.2.1 Tomato peroxisome 36.03 19.82
Protein Annotations
Gene3D:3.90.226.10EntrezGene:4327088MapMan:5.7.3.5.1EMBL:AK067719ProteinID:BAA92965.1ProteinID:BAF04254.1
ProteinID:BAS70940.1InterPro:ClpP/crotonase-like_dom_sfInterPro:Enoyl-CoA_hydra/isoGO:GO:0003674GO:GO:0003824GO:GO:0004165
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005777GO:GO:0008150
GO:GO:0008152EnsemblPlantsGene:Os01g0205600EnsemblPlants:Os01t0205600-01PFAM:PF00378PANTHER:PTHR11941PANTHER:PTHR11941:SF84
UniProt:Q9LEA0SUPFAM:SSF52096UniParc:UPI00000A7C76RefSeq:XP_015617787.1SEG:seg:
Description
Crotonase, core domain containing protein. (Os01t0205600-01)
Coordinates
chr1:+:5773300..5774176
Molecular Weight (calculated)
25588.9 Da
IEP (calculated)
6.247
GRAVY (calculated)
0.249
Length
247 amino acids
Sequence
(BLAST)
001: MDTASLCTVE KRGAVHVITL TGAGEHRLGP PLLSALRSAV AAVRAAAAAG AGGALVIAGE GKYFSNGFDL DWARTVPAEL HASMGGAFRG LVADLLALPV
101: PTVAAVTGHA AAAGCALALA HDAVVMRASR GFLYMSEVDA GLKIVDFFAE LIRQKVPDAV NRRDLVLRGD KMTAADALRR GIVDAAVDGG VDDVVAAAVR
201: EAEALAARGW DGEIVAETRK AIWPELWAKV KDHATDEPPP PPPRPLL
Best Arabidopsis Sequence Match ( AT4G14440.1 )
(BLAST)
001: MCTLEKRGDL FLLTLTGEDE HRFHPDTIAS VLSLLEQAKS QSTKGSVLIT TGHGKFFSNG FDLAWAQSAG HGAIKRMHQM VKSFKPVLAA LLDLPMPTIA
101: ALNGHAAASG LMFALSHDYV FMRKDRGVLY MSEVDIGLPV PDYFSALVVA KVGSGIARRE LLLSGKKLKG EEAVALGIVD SAAHDSAEGV VEATVSLGES
201: LAAKKWNGEV YATIRKSLYP ELCRMVDLTA NNLATHNL
Arabidopsis Description
ECI3Enoyl-CoA delta isomerase 3 [Source:UniProtKB/Swiss-Prot;Acc:O23300]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.