Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- plastid 4
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES02247 | Sorghum | plastid | 89.73 | 88.16 |
| TraesCS3B01G162100.1 | Wheat | cytosol | 88.1 | 88.1 |
| TraesCS3A01G143000.1 | Wheat | cytosol | 87.65 | 87.65 |
| TraesCS3D01G144600.1 | Wheat | cytosol | 87.95 | 87.56 |
| Zm00001d008930_P003 | Maize | cytosol | 86.76 | 86.37 |
| Zm00001d039362_P002 | Maize | cytosol | 85.86 | 86.12 |
| HORVU3Hr1G027650.2 | Barley | mitochondrion | 78.42 | 79.13 |
| Zm00001d004494_P001 | Maize | cytosol, mitochondrion | 26.04 | 78.83 |
| Os05t0210600-01 | Rice | cytosol | 42.11 | 70.57 |
| Os01t0616300-01 | Rice | cytosol | 5.65 | 61.29 |
| VIT_18s0001g09830.t01 | Wine grape | cytosol | 23.51 | 59.85 |
| GSMUA_Achr4P08560_001 | Banana | cytosol | 58.33 | 57.23 |
| GSMUA_Achr7P24480_001 | Banana | cytosol | 55.21 | 57.16 |
| GSMUA_AchrUn_... | Banana | endoplasmic reticulum | 42.11 | 56.26 |
| KRH55099 | Soybean | nucleus | 55.51 | 55.01 |
| KRH21985 | Soybean | cytosol | 56.55 | 54.91 |
| KRH26223 | Soybean | nucleus | 55.21 | 54.88 |
| VIT_19s0014g01470.t01 | Wine grape | cytosol | 55.65 | 53.97 |
| KRH27330 | Soybean | cytosol | 55.8 | 53.72 |
| KRH22291 | Soybean | plastid | 46.58 | 53.6 |
| Bra038116.1-P | Field mustard | cytosol | 52.08 | 53.19 |
| CDY25865 | Canola | cytosol | 52.08 | 53.19 |
| VIT_12s0028g02240.t01 | Wine grape | cytosol | 56.1 | 53.1 |
| GSMUA_Achr3P25160_001 | Banana | cytosol | 56.25 | 53.09 |
| Os05t0587300-01 | Rice | cytosol | 43.6 | 52.79 |
| CDY25722 | Canola | cytosol, plastid | 52.23 | 52.62 |
| Bra030946.1-P | Field mustard | cytosol, plastid | 52.38 | 52.54 |
| CDY02514 | Canola | cytosol, plastid | 52.38 | 52.54 |
| CDY45930 | Canola | cytosol | 51.49 | 52.5 |
| PGSC0003DMT400054803 | Potato | cytosol | 22.92 | 52.38 |
| CDY61202 | Canola | cytosol | 51.34 | 51.42 |
| Bra000267.1-P | Field mustard | cytosol | 51.34 | 51.34 |
| Solyc07g062580.2.1 | Tomato | cytosol | 53.27 | 51.07 |
| PGSC0003DMT400032362 | Potato | cytosol | 52.98 | 50.86 |
| CDY42827 | Canola | cytosol | 50.45 | 50.52 |
| AT2G42580.1 | Thale cress | cytosol | 51.93 | 50.51 |
| AT1G53300.1 | Thale cress | cytosol | 52.53 | 50.5 |
| CDY51514 | Canola | cytosol | 50.0 | 50.22 |
| CDY55390 | Canola | cytosol | 49.7 | 49.93 |
| AT3G58620.1 | Thale cress | cytosol | 50.6 | 49.85 |
| Bra004709.1-P | Field mustard | cytosol | 48.21 | 49.32 |
| Bra007405.1-P | Field mustard | cytosol | 49.11 | 49.03 |
| CDY49237 | Canola | cytosol | 48.21 | 48.58 |
| CDX71941 | Canola | cytosol | 48.51 | 48.37 |
| CDY34224 | Canola | cytosol | 4.91 | 47.83 |
| Os01t0616333-01 | Rice | cytosol, plastid | 8.48 | 47.11 |
| KRH27037 | Soybean | nucleus | 46.88 | 46.67 |
| PGSC0003DMT400054902 | Potato | cytosol | 20.24 | 45.48 |
| GSMUA_AchrUn_... | Banana | cytosol | 17.86 | 44.78 |
| PGSC0003DMT400054904 | Potato | cytosol | 40.03 | 44.54 |
| Solyc10g007240.1.1 | Tomato | cytosol | 38.39 | 43.43 |
| PGSC0003DMT400054796 | Potato | cytosol, plastid | 39.14 | 42.76 |
| Bra023795.1-P | Field mustard | cytosol | 5.51 | 42.05 |
| PGSC0003DMT400054909 | Potato | cytosol | 25.6 | 41.75 |
| Solyc10g007230.1.1 | Tomato | cytosol | 36.9 | 41.61 |
| PGSC0003DMT400054911 | Potato | cytosol | 32.14 | 41.46 |
| Os02t0753500-01 | Rice | cytosol | 18.01 | 41.44 |
| AT3G14950.1 | Thale cress | cytosol | 44.94 | 41.37 |
| Bra027292.1-P | Field mustard | cytosol | 43.6 | 39.92 |
| Solyc10g007220.1.1 | Tomato | cytosol | 29.91 | 39.8 |
| CDX97619 | Canola | cytosol | 42.56 | 39.45 |
| CDY32327 | Canola | cytosol | 42.71 | 39.37 |
| CDY20095 | Canola | nucleus | 42.56 | 39.29 |
| CDX98517 | Canola | cytosol | 42.11 | 39.09 |
| Solyc10g007250.1.1 | Tomato | cytosol | 16.07 | 38.71 |
| Solyc10g007420.2.1 | Tomato | cytosol | 24.4 | 38.59 |
| Bra021583.1-P | Field mustard | nucleus | 43.01 | 38.23 |
| PGSC0003DMT400091014 | Potato | nucleus | 33.04 | 36.57 |
| Solyc10g007430.1.1 | Tomato | cytosol, plastid | 20.54 | 36.51 |
| CDY40820 | Canola | mitochondrion | 14.58 | 34.88 |
| CDY34222 | Canola | cytosol | 15.92 | 34.74 |
| CDY34223 | Canola | cytosol | 16.37 | 33.74 |
| Bra023793.1-P | Field mustard | cytosol | 20.39 | 33.25 |
| Bra023794.1-P | Field mustard | cytosol, nucleus, plastid | 16.07 | 33.13 |
| Os10t0486900-01 | Rice | cytosol | 8.33 | 23.73 |
Protein Annotations
| Gene3D:1.25.40.10 | MapMan:11.3.2.5 | Gene3D:3.40.30.10 | EntrezGene:4324584 | ProteinID:BAD73065.1 | ProteinID:BAD81412.1 |
| ProteinID:BAF04324.1 | ProteinID:BAS71049.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005623 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0019725 | GO:GO:0045454 | InterPro:IPR011990 |
| InterPro:IPR013026 | InterPro:IPR013766 | InterPro:IPR019734 | EnsemblPlantsGene:Os01g0218200 | EnsemblPlants:Os01t0218200-00 | PFAM:PF00085 |
| PFAM:PF00515 | PFAM:PF13432 | PFscan:PS50005 | PFscan:PS50293 | PANTHER:PTHR22904 | PANTHER:PTHR22904:SF402 |
| UniProt:Q5QNE5 | SMART:SM00028 | SUPFAM:SSF48452 | SUPFAM:SSF52833 | InterPro:TPR-contain_dom | InterPro:TPR-like_helical_dom_sf |
| InterPro:TPR_1 | InterPro:TPR_repeat | InterPro:Thioredoxin-like_sf | InterPro:Thioredoxin_domain | UniParc:UPI000048DE5D | RefSeq:XP_015624543.1 |
| SEG:seg | : | : | : | : | : |
Description
Thioredoxin domain 2 containing protein. (Os01t0218200-00)
Coordinates
chr1:+:6471789..6476664
Molecular Weight (calculated)
72550.4 Da
IEP (calculated)
8.590
GRAVY (calculated)
-0.292
Length
672 amino acids
Sequence
(BLAST)
(BLAST)
001: MSHRALPPMP DTLSDAFAAA VLMSSTDKPD TLPPGRLSPV SPLTHSSSSK LPTPSSSSGS SGSLSVSRAP ASALASRRSH SGEIPLPSDG PPRGSRPGHR
101: RTGSGPLIFT SCSSSATSPL TNALPAGNIC PSGRLAKPLS SCSAAATPPA PTPPRAARHD VLGSGTANYG HGSIVRSRSG GVVVAEEDAV VRRAMSSADP
201: EELKKAGNEQ YKKGYFEEAL RLYDRALALC PDNAACRGNR AAALIGLRRI GEAVKECEEA VRIDPSYGRA HQRLASLHIR LGHIEDAQRH LSLATPQPDL
301: LELHKLQTVE KHLGRCMDAR KVGDWKSVLR ESDASIAAGA DCSAMLFASR AEALLRLNQL DEADLAISSA SKLDYSSSCT SDNKFCGFLA NAYLFYVHAQ
401: VDMALGRFDH AVSSVDKARI IDQGNVEVVT MHNNVKAVAR ARSLGNELFN SGKFSEACLA YGEGLKHHPV NPVLYCNRAA CRFKLGQWEK SIEDCNEALK
501: IQPNYPKALL RRAASYGKME RWAESVKDYE VLRKELPGDT EVAEAYFHAQ VALKSSRGEE VSNMKFGGEV EAITGMEQFQ MATSLPGVSV IHFMTPLNQQ
601: CCKISPFVNT LCTRYPSISF LKVDISESPA VARAENVRTV PTFKIYKNGT RVKEMICPSL QLLEYSVRHY GI
101: RTGSGPLIFT SCSSSATSPL TNALPAGNIC PSGRLAKPLS SCSAAATPPA PTPPRAARHD VLGSGTANYG HGSIVRSRSG GVVVAEEDAV VRRAMSSADP
201: EELKKAGNEQ YKKGYFEEAL RLYDRALALC PDNAACRGNR AAALIGLRRI GEAVKECEEA VRIDPSYGRA HQRLASLHIR LGHIEDAQRH LSLATPQPDL
301: LELHKLQTVE KHLGRCMDAR KVGDWKSVLR ESDASIAAGA DCSAMLFASR AEALLRLNQL DEADLAISSA SKLDYSSSCT SDNKFCGFLA NAYLFYVHAQ
401: VDMALGRFDH AVSSVDKARI IDQGNVEVVT MHNNVKAVAR ARSLGNELFN SGKFSEACLA YGEGLKHHPV NPVLYCNRAA CRFKLGQWEK SIEDCNEALK
501: IQPNYPKALL RRAASYGKME RWAESVKDYE VLRKELPGDT EVAEAYFHAQ VALKSSRGEE VSNMKFGGEV EAITGMEQFQ MATSLPGVSV IHFMTPLNQQ
601: CCKISPFVNT LCTRYPSISF LKVDISESPA VARAENVRTV PTFKIYKNGT RVKEMICPSL QLLEYSVRHY GI
001: MSHSRRLSLE PAIDSITGRF RDLQRNDDDV NKPDFRELDL GSPVSTLMPR GSASSSAAAT PTSSSGSSGS ASGKPSVSSQ MAKRLDDAYK SHSGELSSPG
101: SGMPTTTRIL KPGHRRSSST GTPLIFSGSS FTSATSHTSP QGGGSGATSA VSPNTGVLPA GNICPSGRIL KTGMASRTSS RTETLCTGTG NYGHGNVVRS
201: GGGGGTSGKA VRVAENGENP EELKRMGNDM YRRGSFSEAL SLYDRAILIS PGNAAYRSNR AAALTALRRL GEAVKECLEA VRIDPSYSRA HQRLASLYLR
301: LGEAENARRH ICFSGQCPDQ ADLQRLQTLE KHLRRCWEAR KIGDWKTAIK ETDAAIANGA DSSPQLVACK AEAFLRLKQI EDSDFCVSCI PRLDHHYHSQ
401: PQVKLFGMVV EAYVLCIQAQ VDMALGRFEN AVVKAERAAM LDQTNPEVVS VLNNVKMVVR ARTRGNELFS SGRFSEACVA YGDGLKQDDS NSVLYCNRAA
501: CWYKLGLWEK SVEDCNHALK SQPSYIKALL RRAASYGKLG RWEDAVKDYE FLRRELPGDS EVAESLERAK TVLMNRSQES KSLGFNNEVE AVSTLDKFKK
601: SVALPGVSVF HFKSSSNRQC EEISPFINTL CLRYPLVHFF MVDVEESMAL AKAESIRKVP TFKMYKNGDK VKEMVCPSHQ FLEDSIKHFL L
101: SGMPTTTRIL KPGHRRSSST GTPLIFSGSS FTSATSHTSP QGGGSGATSA VSPNTGVLPA GNICPSGRIL KTGMASRTSS RTETLCTGTG NYGHGNVVRS
201: GGGGGTSGKA VRVAENGENP EELKRMGNDM YRRGSFSEAL SLYDRAILIS PGNAAYRSNR AAALTALRRL GEAVKECLEA VRIDPSYSRA HQRLASLYLR
301: LGEAENARRH ICFSGQCPDQ ADLQRLQTLE KHLRRCWEAR KIGDWKTAIK ETDAAIANGA DSSPQLVACK AEAFLRLKQI EDSDFCVSCI PRLDHHYHSQ
401: PQVKLFGMVV EAYVLCIQAQ VDMALGRFEN AVVKAERAAM LDQTNPEVVS VLNNVKMVVR ARTRGNELFS SGRFSEACVA YGDGLKQDDS NSVLYCNRAA
501: CWYKLGLWEK SVEDCNHALK SQPSYIKALL RRAASYGKLG RWEDAVKDYE FLRRELPGDS EVAESLERAK TVLMNRSQES KSLGFNNEVE AVSTLDKFKK
601: SVALPGVSVF HFKSSSNRQC EEISPFINTL CLRYPLVHFF MVDVEESMAL AKAESIRKVP TFKMYKNGDK VKEMVCPSHQ FLEDSIKHFL L
Arabidopsis Description
TTL3Inactive TPR repeat-containing thioredoxin TTL3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SIN1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.