Factsheet for Bra027292.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX97619	Canola	cytosol	97.82	99.03
Bra021583.1-P	Field mustard	nucleus	76.7	74.47
AT3G14950.1	Thale cress	cytosol	68.94	69.32
Bra038116.1-P	Field mustard	cytosol	50.68	56.53
Bra030946.1-P	Field mustard	cytosol, plastid	51.23	56.12
Bra023795.1-P	Field mustard	cytosol	6.68	55.68
KRH21985	Soybean	cytosol	47.41	50.29
VIT_19s0014g01470.t01	Wine grape	cytosol	47.0	49.78
KRH27330	Soybean	cytosol	47.28	49.71
KRH26223	Soybean	nucleus	45.78	49.7
KRH55099	Soybean	nucleus	45.37	49.12
PGSC0003DMT400054803	Potato	cytosol	19.07	47.62
GSMUA_Achr10P...	Banana	cytosol	43.19	47.53
Solyc07g062580.2.1	Tomato	cytosol	43.87	45.93
PGSC0003DMT400032362	Potato	cytosol	43.6	45.71
Bra023793.1-P	Field mustard	cytosol	25.48	45.39
GSMUA_Achr7P24480_001	Banana	cytosol	39.51	44.68
Bra023794.1-P	Field mustard	cytosol, nucleus, plastid	19.48	43.87
Zm00001d008930_P003	Maize	cytosol	40.33	43.85
GSMUA_Achr4P08560_001	Banana	cytosol	40.87	43.8
Os01t0218200-00	Rice	plastid	39.92	43.6
TraesCS3B01G162100.1	Wheat	cytosol	39.92	43.6
GSMUA_Achr3P25160_001	Banana	cytosol	42.23	43.54
GSMUA_AchrUn_...	Banana	endoplasmic reticulum	29.7	43.34
TraesCS3A01G143000.1	Wheat	cytosol	39.51	43.15
TraesCS3D01G144600.1	Wheat	cytosol	39.51	42.96
PGSC0003DMT400054904	Potato	cytosol	35.29	42.88
Zm00001d044479_P001	Maize	cytosol	39.78	42.88
EES02247	Sorghum	plastid	39.92	42.84
Zm00001d039362_P002	Maize	cytosol	39.1	42.84
EES01073	Sorghum	cytosol	39.65	42.73
PGSC0003DMT400054902	Potato	cytosol	17.3	42.47
HORVU3Hr1G027650.2	Barley	mitochondrion	38.28	42.19
Solyc10g007240.1.1	Tomato	cytosol	33.92	41.92
Os05t0210600-01	Rice	cytosol	22.89	41.9
Bra000267.1-P	Field mustard	cytosol	38.28	41.82
TraesCS3D01G231300.1	Wheat	cytosol, mitochondrion	38.96	41.57
HORVU3Hr1G054240.2	Barley	cytosol, mitochondrion	38.83	41.42
TraesCS3B01G251600.1	Wheat	cytosol, mitochondrion	38.83	41.42
Zm00001d011352_P001	Maize	cytosol	38.42	41.41
TraesCS3A01G221800.1	Wheat	cytosol	38.69	41.28
HORVU1Hr1G093390.2	Barley	cytosol	37.74	41.16
Solyc10g007230.1.1	Tomato	cytosol	33.38	41.11
TraesCS1B01G462300.1	Wheat	cytosol	38.83	41.07
TraesCS1A01G427400.1	Wheat	cytosol	38.96	41.03
TraesCS1D01G437100.1	Wheat	nucleus	38.96	40.97
PGSC0003DMT400054796	Potato	cytosol, plastid	34.2	40.81
Bra004709.1-P	Field mustard	cytosol	36.51	40.79
OQU78515	Sorghum	cytosol	38.56	40.43
Bra007405.1-P	Field mustard	cytosol	37.06	40.42
Zm00001d004494_P001	Maize	cytosol, mitochondrion	12.13	40.09
PGSC0003DMT400054911	Potato	cytosol	28.07	39.54
PGSC0003DMT400054909	Potato	cytosol	21.66	38.59
Solyc10g007220.1.1	Tomato	cytosol	25.75	37.43
Solyc10g007420.2.1	Tomato	cytosol	21.66	37.41
Os05t0587300-01	Rice	cytosol	27.79	36.76
Solyc10g007250.1.1	Tomato	cytosol	13.76	36.2
GSMUA_AchrUn_...	Banana	cytosol	12.94	35.45
PGSC0003DMT400091014	Potato	nucleus	29.29	35.42
Solyc10g007430.1.1	Tomato	cytosol, plastid	17.71	34.39
Bra006046.1-P	Field mustard	cytosol	20.16	33.18
Bra003657.1-P	Field mustard	cytosol	22.07	31.64
Bra015628.1-P	Field mustard	cytosol	22.62	31.56
Bra009058.1-P	Field mustard	cytosol, mitochondrion	22.21	29.11
Bra024360.1-P	Field mustard	mitochondrion	21.93	27.47
Zm00001d009724_P009	Maize	cytosol	38.28	26.29
Bra032136.1-P	Field mustard	cytosol	7.63	20.22
Bra028602.1-P	Field mustard	cytosol	21.66	14.6
Bra011197.1-P	Field mustard	cytosol	1.23	10.98
Zm00001d006366_P001	Maize	cytosol	0.54	1.72
Zm00001d033961_P001	Maize	cytosol	0.54	1.72

Protein Annotations

Gene3D:1.25.40.10	MapMan:11.3.2.5	Gene3D:3.40.30.10	EnsemblPlantsGene:Bra027292	EnsemblPlants:Bra027292.1	EnsemblPlants:Bra027292.1-P
ncoils:Coil	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005623
GO:GO:0008150	GO:GO:0009987	GO:GO:0019725	GO:GO:0045454	InterPro:IPR011990	InterPro:IPR013026
InterPro:IPR013766	InterPro:IPR019734	UniProt:M4EET0	PFAM:PF00085	PFAM:PF13181	PFAM:PF13414
PFAM:PF13431	PFscan:PS50005	PFscan:PS50293	PANTHER:PTHR22904	PANTHER:PTHR22904:SF402	SMART:SM00028
SUPFAM:SSF48452	SUPFAM:SSF52833	InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf	InterPro:TPR_repeat	InterPro:Thioredoxin-like_sf
InterPro:Thioredoxin_domain	UniParc:UPI0002547BEE	SEG:seg	:	:	:

Description

AT3G14950 (E=4e-236) TTL2 | TTL2 (Tetratricopetide-repeat Thioredoxin-Like 2); binding

Coordinates

chrA05:+:20154140..20157024

Molecular Weight (calculated)

79872.1 Da

IEP (calculated)

9.533

GRAVY (calculated)

-0.353

Length

734 amino acids

Sequence
(BLAST)

001: MLKPIKHVSE PDTVADKLRR SLNMSNSKPD NVHVEFGSPI TPLQTQPSGL TSAATTTSNS SFSSSSSGSV SGRAVHTPVS TKTDSGRSNP SAVQSSRATA
101: PSASQTSKTS NPSAAKSSKS TTSGSSNPAG AKAGSNPRPG RVSSASDSAS GSTKRSTKSS TPPPQPVKIL PGGNLFPSGK VHITGMTQGV PKRMILGPGS
201: KSYGYGSVMR GTNSYSSTPA KLTTSSGSSS SGALVISRCS SGGGGSEVDT SWKRVMNSPN PEEVKRLGNE MFKKGCFSEA LKFYDRALEL SPSNATYRSN
301: RAAALSGLGR IAEAVIECEH AIKLDPNFAR AHHRLATLLL RLGQVDNAGK HFFSVEEPSD PMVVKVLEEV DRHLNKCAEA RRRGEWNIVL TEVSAAMESG
401: ADMSPQLAMC KVEALMKLLR LDEAQTILAS APKIEILLPS SFTRIRFFDM ISEAYTYFVK SQMELALGRF ENAVTFVEKA SEMEPRNSEI ETLNRNVKMI
501: VRTRDRGNGL YNSERYTEAS AAYAEGLKFD PYNATLFSHR ADCFFKVGMW ESSIEDCSHA LLILPSCTKA RRQRAASYSK LERWAEAVSD YETLRKELSY
601: DREIAESLFH AQVALKKSRG EVVLNMEFGG EVEEVFSLEE LKAALTRPGV SVVLFMKAFD QQCKEISIFM NALCIRYPSL HFLKVEIEKC PGVGDAEKVR
701: VVPTFKIYKV GIRMKEIVCP SKEALEISVR HYGL

Best Arabidopsis Sequence Match ( AT3G14950.1 )
(BLAST)

001: MSKLKKPILE SNCVADKLCD SLNMEDNNND KPDTINVDLG SPITPLQTQP SGLSSSTSSF SSSSSGSVTG HAGHTPPVTR KPDSVQPVPS ASKSKSSNLS
101: SAAKSSKSST TPSSAAQFGG SYSPARAQSR ASSQVGAKTG NIIRPSSNSA SVTTKPSGNK SSVSSKQSLK ILPAGNLVPS GKVQITGMTQ EKPRSMVLGP
201: GAKSYGYGSI IRGNNLSPVK PTMMSDSSSV LPLTLSNNST GGPDAYTSWK IAIYGSNPEE VKRFGNEMFR KGCFAEALKL YDRAIELSPS NATYHSNRAA
301: ALSSLGQIGE AVNECEIAIK LDPNFARAHH RLASLLLRLG YVDNAGIHLY SVEEPLDPTV VKMLQQVDKH LNKCTYARRR GEWSIVLTEV SAAIASGADS
401: SPQLAMCKAE ALLKLLRLDD AQRVLECVPK VEPFPASFSH TRFFDMIAEA YTSFVKSQME LALGRFENAV VTAEKASKID PQNNEVEILY KNVRLITRAR
501: DRGNDLYELE RYTEARSAYA EGLKYDPSNA TLLCYRADCF FKVGMWESSI EDCNHALLIL PSYTKPRLQR AALYTKLERW AEAVSDYEIL RKELPYDKEI
601: AESLFHAQVA LKKSRGEVVL NMEFGGEVEE ISSLEELKAA LTRPGVSVVH FFRASDPQCK EISTFVDALC VRYPSLHFLK VEIVKCPEVG NAERVRVVPT
701: FKIYKLGIRM KEIVCPSKEA LEKTVRHYGL

Arabidopsis Description

TTL2TPR repeat-containing thioredoxin TTL2 [Source:UniProtKB/Swiss-Prot;Acc:F4IXE4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.