Factsheet for Solyc10g007220.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 2
nucleus 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400054911	Potato	cytosol	69.5	67.37
Solyc10g007420.2.1	Tomato	cytosol	45.94	54.59
Solyc10g007230.1.1	Tomato	cytosol	60.4	51.17
Solyc10g007240.1.1	Tomato	cytosol	55.05	46.8
Solyc10g007430.1.1	Tomato	cytosol, plastid	30.5	40.74
Solyc10g007250.1.1	Tomato	cytosol	21.78	39.43
CDY34224	Canola	cytosol	5.15	37.68
Bra023795.1-P	Field mustard	cytosol	6.53	37.5
Solyc07g062580.2.1	Tomato	cytosol	50.3	36.23
Os05t0210600-01	Rice	cytosol	28.51	35.91
GSMUA_AchrUn_...	Banana	endoplasmic reticulum	35.64	35.79
VIT_19s0014g01470.t01	Wine grape	cytosol	47.33	34.49
Zm00001d004494_P001	Maize	cytosol, mitochondrion	15.05	34.23
KRH55099	Soybean	nucleus	45.54	33.92
KRH26223	Soybean	nucleus	45.15	33.73
KRH21985	Soybean	cytosol	45.74	33.38
KRH27330	Soybean	cytosol	45.94	33.24
GSMUA_Achr10P...	Banana	cytosol	43.56	32.98
GSMUA_Achr7P24480_001	Banana	cytosol	41.98	32.67
CDY40820	Canola	mitochondrion	17.82	32.03
GSMUA_Achr4P08560_001	Banana	cytosol	42.77	31.53
Bra038116.1-P	Field mustard	cytosol	40.4	31.0
CDY25722	Canola	cytosol, plastid	40.79	30.88
CDY25865	Canola	cytosol	40.2	30.85
CDY34222	Canola	cytosol	18.61	30.52
CDY45930	Canola	cytosol	39.8	30.5
AT1G53300.1	Thale cress	cytosol	42.18	30.47
CDY02514	Canola	cytosol, plastid	40.4	30.45
Bra030946.1-P	Field mustard	cytosol, plastid	40.4	30.45
HORVU1Hr1G093390.2	Barley	cytosol	40.4	30.31
EES01073	Sorghum	cytosol	40.59	30.1
Zm00001d044479_P001	Maize	cytosol	40.4	29.96
TraesCS1D01G437100.1	Wheat	nucleus	41.39	29.94
Os01t0218200-00	Rice	plastid	39.8	29.91
Zm00001d039362_P002	Maize	cytosol	39.6	29.85
TraesCS1B01G462300.1	Wheat	cytosol	40.99	29.83
TraesCS3A01G221800.1	Wheat	cytosol	40.4	29.65
GSMUA_Achr3P25160_001	Banana	cytosol	41.78	29.63
TraesCS3B01G251600.1	Wheat	cytosol, mitochondrion	40.2	29.51
TraesCS3D01G231300.1	Wheat	cytosol, mitochondrion	40.2	29.51
Zm00001d008930_P003	Maize	cytosol	39.41	29.48
TraesCS1A01G427400.1	Wheat	cytosol	40.59	29.41
HORVU3Hr1G054240.2	Barley	cytosol, mitochondrion	40.0	29.36
TraesCS3B01G162100.1	Wheat	cytosol	38.81	29.17
EES02247	Sorghum	plastid	39.41	29.09
Zm00001d011352_P001	Maize	cytosol	39.21	29.07
TraesCS3A01G143000.1	Wheat	cytosol	38.61	29.02
OQU78515	Sorghum	cytosol	39.8	28.71
TraesCS3D01G144600.1	Wheat	cytosol	38.22	28.59
HORVU3Hr1G027650.2	Barley	mitochondrion	37.23	28.23
Os05t0587300-01	Rice	cytosol	30.1	27.39
AT3G14950.1	Thale cress	cytosol	39.01	26.99
CDY32327	Canola	cytosol	38.42	26.61
Bra023793.1-P	Field mustard	cytosol	21.58	26.46
CDY20095	Canola	nucleus	38.02	26.37
CDY34223	Canola	cytosol	16.83	26.07
CDX98517	Canola	cytosol	37.23	25.97
Bra027292.1-P	Field mustard	cytosol	37.43	25.75
Bra021583.1-P	Field mustard	nucleus	38.42	25.66
CDX97619	Canola	cytosol	36.63	25.52
Bra023794.1-P	Field mustard	cytosol, nucleus, plastid	16.44	25.46
Solyc04g073940.2.1	Tomato	cytosol	27.33	25.41
Solyc04g055000.2.1	Tomato	cytosol	25.35	21.81
Zm00001d009724_P009	Maize	cytosol	39.41	18.62
Solyc07g006180.2.1	Tomato	cytosol	9.31	18.01
GSMUA_AchrUn_...	Banana	cytosol	8.51	16.04
Zm00001d006366_P001	Maize	cytosol	0.2	0.43
Zm00001d033961_P001	Maize	cytosol	0.2	0.43

Protein Annotations

Gene3D:1.25.40.10	Gene3D:3.40.30.10	MapMan:35.1	ncoils:Coil	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR011990	InterPro:IPR013026	InterPro:IPR019734	UniProt:K4CXQ2	PFAM:PF07719
PFAM:PF13181	PFscan:PS50005	PFscan:PS50293	PANTHER:PTHR22904	PANTHER:PTHR22904:SF402	SMART:SM00028
SUPFAM:SSF48452	SUPFAM:SSF52833	EnsemblPlantsGene:Solyc10g007220.1	EnsemblPlants:Solyc10g007220.1.1	InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf
InterPro:TPR_2	InterPro:TPR_repeat	InterPro:Thioredoxin-like_sf	UniParc:UPI000276B1BE	SEG:seg	:

Description

No Description!

Coordinates

chr10:+:1639331..1643081

Molecular Weight (calculated)

56816.0 Da

IEP (calculated)

5.946

GRAVY (calculated)

-0.384

Length

505 amino acids

Sequence
(BLAST)

001: MSGSRRKRAG GRSTADEECR DGGGSASVSG YSSSSSATVY PEQLSPAVLN KIGNNCLVNR DYNEALRYYE EAIAITPDDC KLHCNRAGAL IGLMRYPEAM
101: AEFELAINLA PRRYQPRHDF GLWLLSLGQV ENATDHLYFL GHKPDEATSQ KLEAVKEHIN KCTEARRVED WATMKIESKA AFTSGADSSP QLFACRAEAH
201: LKLNDIEYAE TWIYIARMHK PFTARQSKIF GMVSEAYVFF VQAQIHSSVG KFAAAVTAIE KAAQIDNQND EVTDELENIR LVVEAHKHGD EHFCSERYEQ
301: ACTSYGEGLW VDPSNPVLYY NRAACWSKLG EWEKSLADSN RALLYWPQYA KALHLRAASN IKLKRWADAV RDYEILRQEL PRDREVAANL SHARVELRRE
401: APEGKVELVS DVEKFQAVIA SGESVVYFNE LTNPEYAWMS SVMDTLSAKY PSVIFLKVVV EQSRAAAENI TTLPRFRLYK DGSRVGTATL DVLEIMIKDN
501: LIDPI

Best Arabidopsis Sequence Match ( AT1G53300.1 )
(BLAST)

001: MPKSVKPISE SDKLSDHLRD SSLTSEINKP DFRELDLGSP VSPLRSQPRG LTTTTTTTTT SSSSSSSSGS VTGRIKHAPV IGRSNSVRSQ SNSSSGNNNL
101: RPRSDSATTS SSSHSQPLLS SSSSSATSPA PTSPANVLPT GNICPSGKIQ ITGMTQSRSR SDVLGSGTGT YGHGSIMRGG GISPAKPTNT GGGSNSPVNV
201: GSSSRSSSTV ATGETPIWKK AILGSDSEEV KRVGNEMYRK GLFNEALKLY DRAIALSPTN AAYRSNRAAA LIGLSRIGEA VKECEDAVRS DPNYGRAHHR
301: LALLLIRLGQ VNSARKHLCF LGRPSDPMEL QKLEAVEKHL IKCVDARRVT DWKTVLIEAD AAIVSGADFS PQLFMCKVEA FLKLHRLDDA QSKLLEVPKV
401: EPFPVSCSQT RFSGMACEAY IYFVKAQIEM ALGRFENAVM AAEKASQIDP RCNEVAMLHN TVTLVARARA RGNDLYKSER YTEASSAYAE GLRLDPCNAI
501: LYCNRAACWF KLGMWERSIE DCNQALRYQP SYTKPLLRRA ASNSKMERWG AAVSDYEALI RELPHDKEVA ESLFHAQVAL KKSRGEEVLN MEFGGEVEEI
601: YSLEQFKSAM NLPGVSVIHF STASDHQCKQ ISPFVDSLCT RYPSIHFLKV DIDKCPSIGN AENVRVVPTV KIYKNGSRVK EIVCPSKEVL EYSVRHYSG

Arabidopsis Description

TTL1TPR repeat-containing thioredoxin TTL1 [Source:UniProtKB/Swiss-Prot;Acc:Q9MAH1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.