CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX97619	Canola	cytosol	97.93	97.79
CDY20095	Canola	nucleus	76.11	75.69
CDY32327	Canola	cytosol	75.83	75.31
AT3G14950.1	Thale cress	cytosol	69.2	68.63
CDY34224	Canola	cytosol	5.39	56.52
CDY25865	Canola	cytosol	50.69	55.78
CDY45930	Canola	cytosol	50.41	55.39
CDY02514	Canola	cytosol, plastid	51.1	55.22
CDY25722	Canola	cytosol, plastid	50.55	54.87
CDY34222	Canola	cytosol	21.55	50.65
KRH21985	Soybean	cytosol	47.38	49.57
CDY40820	Canola	mitochondrion	19.2	49.47
KRH27330	Soybean	cytosol	47.24	49.0
VIT_19s0014g01470.t01	Wine grape	cytosol	46.69	48.77
PGSC0003DMT400054803	Potato	cytosol	19.61	48.3
KRH26223	Soybean	nucleus	45.03	48.22
KRH55099	Soybean	nucleus	44.75	47.79
GSMUA_Achr10P...	Banana	cytosol	42.27	45.88
Solyc07g062580.2.1	Tomato	cytosol	43.92	45.36
PGSC0003DMT400032362	Potato	cytosol	43.65	45.14
GSMUA_Achr7P24480_001	Banana	cytosol	39.5	44.07
CDY34223	Canola	cytosol	19.61	43.56
GSMUA_Achr4P08560_001	Banana	cytosol	40.88	43.21
GSMUA_Achr3P25160_001	Banana	cytosol	42.13	42.84
Zm00001d008930_P003	Maize	cytosol	39.92	42.81
PGSC0003DMT400054904	Potato	cytosol	35.64	42.72
PGSC0003DMT400054902	Potato	cytosol	17.54	42.47
TraesCS3B01G162100.1	Wheat	cytosol	39.36	42.41
GSMUA_AchrUn_...	Banana	endoplasmic reticulum	29.42	42.35
Os01t0218200-00	Rice	plastid	39.09	42.11
TraesCS3A01G143000.1	Wheat	cytosol	38.95	41.96
Os05t0210600-01	Rice	cytosol	23.2	41.9
Zm00001d044479_P001	Maize	cytosol	39.36	41.85
EES02247	Sorghum	plastid	39.5	41.81
Zm00001d039362_P002	Maize	cytosol	38.67	41.79
TraesCS3D01G144600.1	Wheat	cytosol	38.95	41.78
EES01073	Sorghum	cytosol	39.23	41.7
Solyc10g007240.1.1	Tomato	cytosol	33.84	41.25
CDY42827	Canola	cytosol	38.12	41.13
HORVU3Hr1G027650.2	Barley	mitochondrion	37.71	40.99
CDY61202	Canola	cytosol	37.98	40.98
TraesCS3D01G231300.1	Wheat	cytosol, mitochondrion	38.81	40.84
HORVU3Hr1G054240.2	Barley	cytosol, mitochondrion	38.67	40.7
TraesCS3B01G251600.1	Wheat	cytosol, mitochondrion	38.67	40.7
Solyc10g007230.1.1	Tomato	cytosol	33.43	40.6
HORVU1Hr1G093390.2	Barley	cytosol	37.71	40.56
TraesCS3A01G221800.1	Wheat	cytosol	38.54	40.55
Zm00001d011352_P001	Maize	cytosol	38.12	40.53
TraesCS1A01G427400.1	Wheat	cytosol	38.95	40.46
TraesCS1D01G437100.1	Wheat	nucleus	38.95	40.4
TraesCS1B01G462300.1	Wheat	cytosol	38.67	40.35
PGSC0003DMT400054796	Potato	cytosol, plastid	34.25	40.33
CDY51514	Canola	cytosol	37.15	40.21
Zm00001d004494_P001	Maize	cytosol, mitochondrion	12.29	40.09
CDY55390	Canola	cytosol	36.88	39.91
CDY49237	Canola	cytosol	36.6	39.73
OQU78515	Sorghum	cytosol	38.4	39.71
CDX71941	Canola	cytosol	36.74	39.47
PGSC0003DMT400054911	Potato	cytosol	28.04	38.96
PGSC0003DMT400054909	Potato	cytosol	22.1	38.84
Solyc10g007220.1.1	Tomato	cytosol	25.97	37.23
Solyc10g007420.2.1	Tomato	cytosol	21.55	36.71
Os05t0587300-01	Rice	cytosol	28.04	36.58
CDY08814	Canola	cytosol, plastid	20.99	36.19
Solyc10g007250.1.1	Tomato	cytosol	13.81	35.84
PGSC0003DMT400091014	Potato	nucleus	29.28	34.93
GSMUA_AchrUn_...	Banana	cytosol	12.85	34.7
Solyc10g007430.1.1	Tomato	cytosol, plastid	18.09	34.66
CDX78366	Canola	cytosol	20.86	33.86
CDX81156	Canola	cytosol	20.17	32.74
CDX87474	Canola	cytosol	23.07	31.75
CDX79246	Canola	cytosol	22.38	31.64
CDX88420	Canola	cytosol	22.79	31.37
CDX68030	Canola	cytosol	21.96	31.24
CDY00576	Canola	cytosol	4.97	30.77
CDX69861	Canola	cytosol, mitochondrion	22.51	29.11
CDY21634	Canola	cytosol, mitochondrion	22.38	28.93
CDY40077	Canola	cytosol	22.51	28.35
CDX85779	Canola	cytosol	22.38	28.17
CDY68462	Canola	cytosol	22.38	27.5
Zm00001d009724_P009	Maize	cytosol	37.98	25.73
CDY39682	Canola	cytosol	7.46	19.49
CDY65185	Canola	cytosol	7.18	18.77
CDX72245	Canola	cytosol	6.35	17.49
CDX85780	Canola	nucleus	8.15	12.45
CDX68662	Canola	endoplasmic reticulum, mitochondrion	1.1	7.84
CDY28190	Canola	extracellular	0.97	6.86
Zm00001d006366_P001	Maize	cytosol	0.55	1.72
Zm00001d033961_P001	Maize	cytosol	0.55	1.72

Protein Annotations

Gene3D:1.25.40.10	MapMan:11.3.2.5	Gene3D:3.40.30.10	GO:A0A078EC01	EnsemblPlants:CDX98517	ProteinID:CDX98517
ProteinID:CDX98517.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005623
GO:GO:0008150	GO:GO:0009987	GO:GO:0019725	GO:GO:0045454	EnsemblPlantsGene:GSBRNA2T00106161001	InterPro:IPR011990
InterPro:IPR013026	InterPro:IPR013766	InterPro:IPR019734	PFAM:PF00085	PFAM:PF13181	PFAM:PF13414
PFAM:PF13431	PFscan:PS50005	PFscan:PS50293	PANTHER:PTHR22904	PANTHER:PTHR22904:SF402	SMART:SM00028
SUPFAM:SSF48452	SUPFAM:SSF52833	InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf	InterPro:TPR_repeat	InterPro:Thioredoxin-like_sf
InterPro:Thioredoxin_domain	UniParc:UPI0004EEF92E	SEG:seg	:	:	:

Description

BnaC05g38580D

Coordinates

chrLK031905:-:712798..715468

Molecular Weight (calculated)

78782.7 Da

IEP (calculated)

9.203

GRAVY (calculated)

-0.369

Length

724 amino acids

Sequence
(BLAST)

001: MLKPIKHVSE PDTVADKLRR SLNMTNNKQD NVHVEFGSPI TPLQTQPSGL TSAATTTSNS SFSSSSSGSV SGRAVHTPAS TKSDSGRSNP SAVQSSRATA
101: PSASQTSKTS NPSAAKSSKS TTSGSSNPAG AKAGSNPRPG RVSSASDSAS GSTKRSTKSS TPPPQPVKIL PGGNLFPSGK VHITGMTQGV PKRMILGPGS
201: KSYGYGSVMR GTNSYSSTPA KLTTSSGSSS GALVISRCAS GGGGSEVDTS WKRVMNSPNP EEVKRLGNEM FKKGCFSEAL KFYDRALELS PSNATYRSNR
301: AAALSGLGRI AEAVVECEHA IKLDPNFARA HHRLATLLLR LGQVDNAGKH FFYVEEPSDP MVVKVLEEVD RHLNKCAEAR GRGEWNIVLT EVSAAMESGA
401: DMSPQLAMCK VEALMKLLRL DEAQTILASA PKIEILLPSS FTRIRFFDMI SEAYTYFVKS QMELALGRFE NAVTFIEKAS EMEPRNGEIE TLNRNVKMIV
501: RARDRGNGLY GSERYTEASA AYAEGLKFDP YNATLFSHRA DCFFKVGMWE SSIEDCSHAL LILPSCTKAR RQRAASYSKL ERWAEAVSDY EILRKELSYD
601: REIAESLFHA QVALKKSRGE VVLNMEFGGE VEEVFSLEEL KAALTRPAFD QQCKEISIFM DALCIRYPSL HFLKVEIEKC PEVGDAEKVR VVPTFKIYKV
701: GIRMKEIVCP SKEALEISVR HYGL

Best Arabidopsis Sequence Match ( AT3G14950.1 )
(BLAST)

001: MSKLKKPILE SNCVADKLCD SLNMEDNNND KPDTINVDLG SPITPLQTQP SGLSSSTSSF SSSSSGSVTG HAGHTPPVTR KPDSVQPVPS ASKSKSSNLS
101: SAAKSSKSST TPSSAAQFGG SYSPARAQSR ASSQVGAKTG NIIRPSSNSA SVTTKPSGNK SSVSSKQSLK ILPAGNLVPS GKVQITGMTQ EKPRSMVLGP
201: GAKSYGYGSI IRGNNLSPVK PTMMSDSSSV LPLTLSNNST GGPDAYTSWK IAIYGSNPEE VKRFGNEMFR KGCFAEALKL YDRAIELSPS NATYHSNRAA
301: ALSSLGQIGE AVNECEIAIK LDPNFARAHH RLASLLLRLG YVDNAGIHLY SVEEPLDPTV VKMLQQVDKH LNKCTYARRR GEWSIVLTEV SAAIASGADS
401: SPQLAMCKAE ALLKLLRLDD AQRVLECVPK VEPFPASFSH TRFFDMIAEA YTSFVKSQME LALGRFENAV VTAEKASKID PQNNEVEILY KNVRLITRAR
501: DRGNDLYELE RYTEARSAYA EGLKYDPSNA TLLCYRADCF FKVGMWESSI EDCNHALLIL PSYTKPRLQR AALYTKLERW AEAVSDYEIL RKELPYDKEI
601: AESLFHAQVA LKKSRGEVVL NMEFGGEVEE ISSLEELKAA LTRPGVSVVH FFRASDPQCK EISTFVDALC VRYPSLHFLK VEIVKCPEVG NAERVRVVPT
701: FKIYKLGIRM KEIVCPSKEA LEKTVRHYGL

Arabidopsis Description

TTL2TPR repeat-containing thioredoxin TTL2 [Source:UniProtKB/Swiss-Prot;Acc:F4IXE4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.