Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 1
- cytosol 2
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Os01t0616300-01 | Rice | cytosol | 24.79 | 46.77 |
CDY49237 | Canola | cytosol | 50.43 | 8.85 |
CDY51514 | Canola | cytosol | 49.57 | 8.67 |
CDY61202 | Canola | cytosol | 49.57 | 8.64 |
CDY42827 | Canola | cytosol | 49.57 | 8.64 |
CDX71941 | Canola | cytosol | 49.57 | 8.61 |
CDY55390 | Canola | cytosol | 47.01 | 8.22 |
CDY25722 | Canola | cytosol, plastid | 35.04 | 6.15 |
CDY02514 | Canola | cytosol, plastid | 35.04 | 6.12 |
CDY25865 | Canola | cytosol | 34.19 | 6.08 |
CDY34224 | Canola | cytosol | 3.42 | 5.8 |
CDY45930 | Canola | cytosol | 32.48 | 5.77 |
CDX97619 | Canola | cytosol | 31.62 | 5.1 |
CDY20095 | Canola | nucleus | 31.62 | 5.08 |
CDY32327 | Canola | cytosol | 31.62 | 5.08 |
CDX98517 | Canola | cytosol | 30.77 | 4.97 |
CDY28190 | Canola | extracellular | 4.27 | 4.9 |
CDX68662 | Canola | endoplasmic reticulum, mitochondrion | 4.27 | 4.9 |
CDY39682 | Canola | cytosol | 5.98 | 2.53 |
CDY65185 | Canola | cytosol | 5.98 | 2.53 |
CDX72245 | Canola | cytosol | 5.13 | 2.28 |
CDY34222 | Canola | cytosol | 5.98 | 2.27 |
CDX85780 | Canola | nucleus | 8.55 | 2.11 |
CDY34223 | Canola | cytosol | 5.13 | 1.84 |
Zm00001d035258_P001 | Maize | cytosol | 3.42 | 1.72 |
Zm00001d017669_P001 | Maize | cytosol | 3.42 | 1.72 |
CDY40820 | Canola | mitochondrion | 3.42 | 1.42 |
CDX79246 | Canola | cytosol | 5.98 | 1.37 |
CDX68030 | Canola | cytosol | 5.13 | 1.18 |
CDX88420 | Canola | cytosol | 5.13 | 1.14 |
CDX87474 | Canola | cytosol | 5.13 | 1.14 |
CDX81156 | Canola | cytosol | 3.42 | 0.9 |
CDX78366 | Canola | cytosol | 3.42 | 0.9 |
Os01t0616333-01 | Rice | cytosol, plastid | 0.85 | 0.83 |
CDY08814 | Canola | cytosol, plastid | 2.56 | 0.71 |
CDX85779 | Canola | cytosol | 3.42 | 0.7 |
CDY40077 | Canola | cytosol | 3.42 | 0.7 |
CDY68462 | Canola | cytosol | 2.56 | 0.51 |
CDX69861 | Canola | cytosol, mitochondrion | 1.71 | 0.36 |
CDY21634 | Canola | cytosol, mitochondrion | 1.71 | 0.36 |
Protein Annotations
EnsemblPlants:CDY00576 | EnsemblPlantsGene:GSBRNA2T00110334001 | Gene3D:3.40.30.10 | GO:A0A078EHI0 | GO:GO:0005575 | GO:GO:0005623 |
GO:GO:0008150 | GO:GO:0009987 | GO:GO:0019725 | GO:GO:0045454 | InterPro:IPR013766 | InterPro:Thioredoxin-like_sf |
InterPro:Thioredoxin_domain | PANTHER:PTHR22904 | PANTHER:PTHR22904:SF374 | PFAM:PF00085 | ProteinID:CDY00576 | ProteinID:CDY00576.1 |
SEG:seg | SUPFAM:SSF52833 | UniParc:UPI0004EEFAD0 | MapMan:35.1 | : | : |
Description
BnaC04g23490D
Coordinates
chrLK031920:+:384741..385721
Molecular Weight (calculated)
13643.7 Da
IEP (calculated)
10.070
GRAVY (calculated)
-0.132
Length
117 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSLFPFPSI PKKKESLCFT SNHHQTDKVK LYISPFVNTL CLRYPLVHFY KARPHVDVDE SLALAKAESI KKVPTFKVYK EGDKVKEMVC PRLLVTSYLR
101: TQLHISSYKT SFFSFFF
101: TQLHISSYKT SFFSFFF
001: MSHYRRHSLE PSITSKFRDS LSFQRDDDVI NKPDFRELDF GSPLRPRGSS SAAATPAASG SSSSSSGSAS GKPAVTSQFA RRSHSGELSG LSQTSPVKPG
101: SVNRNLKPGH RRSASAGTPL IYSGLGFSPV NNNNNSSRGG GSGATSPNPG VLPTGNICPS GRILKTGMAT RASVRPETLC TGTANYGHGN IIRTGGKVSH
201: ATKAAAEMSD SEEVKKAGNV MYRKGNYAEA LALYDRAISL SPENPAYRSN RAAALAASGR LEEAVKECLE AVRCDPSYAR AHQRLASLYL RLGEAENARR
301: HLCVSGQCPD QADLQRLQTL EKHLRLCTEA RKIGDWRTVI SEIDAAIANG ADSSPQLVAC KAEAFLRLHQ IKDSDLCISS IPRLDHHHTQ PPEKLFGIVC
401: DAYVLCVQAQ VDMALGRFEN AIVKVERAMT IDHSNSPEVV SVLNNVKNVA KARTRGNELF SSGRYSEASV AYGDGLKLDA FNSVLYCNRA ACWFKLGMWE
501: KSVDDCNQAL RIQPSYTKAL LRRAASYGKL GRWEDAVRDY EVLRKELPGD SEVAESLQRA RNALSNKSEE PKYLGFNNEV EEVSTLDKFK TATSLPGISV
601: FHFKSSSNRQ SEAISPFVNT LCLRYPLVHF FKVDVEESLA LAKAESIKKI PTFKIYKKGE KVKEMVCPSH QLLEDSVTHF LL
101: SVNRNLKPGH RRSASAGTPL IYSGLGFSPV NNNNNSSRGG GSGATSPNPG VLPTGNICPS GRILKTGMAT RASVRPETLC TGTANYGHGN IIRTGGKVSH
201: ATKAAAEMSD SEEVKKAGNV MYRKGNYAEA LALYDRAISL SPENPAYRSN RAAALAASGR LEEAVKECLE AVRCDPSYAR AHQRLASLYL RLGEAENARR
301: HLCVSGQCPD QADLQRLQTL EKHLRLCTEA RKIGDWRTVI SEIDAAIANG ADSSPQLVAC KAEAFLRLHQ IKDSDLCISS IPRLDHHHTQ PPEKLFGIVC
401: DAYVLCVQAQ VDMALGRFEN AIVKVERAMT IDHSNSPEVV SVLNNVKNVA KARTRGNELF SSGRYSEASV AYGDGLKLDA FNSVLYCNRA ACWFKLGMWE
501: KSVDDCNQAL RIQPSYTKAL LRRAASYGKL GRWEDAVRDY EVLRKELPGD SEVAESLQRA RNALSNKSEE PKYLGFNNEV EEVSTLDKFK TATSLPGISV
601: FHFKSSSNRQ SEAISPFVNT LCLRYPLVHF FKVDVEESLA LAKAESIKKI PTFKIYKKGE KVKEMVCPSH QLLEDSVTHF LL
Arabidopsis Description
TTL4TTL4 [Source:UniProtKB/TrEMBL;Acc:A0A178VKQ3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.