Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY55390 | Canola | cytosol | 95.37 | 95.37 |
| CDY61202 | Canola | cytosol | 86.7 | 86.44 |
| CDY42827 | Canola | cytosol | 85.95 | 85.69 |
| AT2G42580.1 | Thale cress | cytosol | 85.05 | 82.34 |
| CDX71941 | Canola | cytosol | 72.2 | 71.66 |
| CDY49237 | Canola | cytosol | 71.15 | 71.36 |
| VIT_18s0001g09830.t01 | Wine grape | cytosol | 22.87 | 57.95 |
| VIT_12s0028g02240.t01 | Wine grape | cytosol | 59.64 | 56.2 |
| KRH22291 | Soybean | plastid | 49.03 | 56.16 |
| GSMUA_Achr10P... | Banana | cytosol | 52.62 | 52.77 |
| EES02247 | Sorghum | plastid | 51.12 | 50.0 |
| Os01t0218200-00 | Rice | plastid | 50.22 | 50.0 |
| CDY00576 | Canola | cytosol | 8.67 | 49.57 |
| TraesCS3B01G162100.1 | Wheat | cytosol | 49.78 | 49.55 |
| Zm00001d008930_P003 | Maize | cytosol | 49.78 | 49.33 |
| Zm00001d039362_P002 | Maize | cytosol | 49.33 | 49.25 |
| TraesCS3D01G144600.1 | Wheat | cytosol | 49.63 | 49.19 |
| TraesCS3A01G143000.1 | Wheat | cytosol | 49.18 | 48.96 |
| CDY25722 | Canola | cytosol, plastid | 48.73 | 48.88 |
| CDY45930 | Canola | cytosol | 47.83 | 48.56 |
| CDY25865 | Canola | cytosol | 47.53 | 48.33 |
| KRH27037 | Soybean | nucleus | 48.73 | 48.3 |
| CDY02514 | Canola | cytosol, plastid | 48.28 | 48.21 |
| GSMUA_Achr7P24480_001 | Banana | cytosol | 46.19 | 47.61 |
| EES01073 | Sorghum | cytosol | 48.43 | 47.58 |
| GSMUA_Achr4P08560_001 | Banana | cytosol | 48.28 | 47.15 |
| Zm00001d004494_P001 | Maize | cytosol, mitochondrion | 15.55 | 46.85 |
| Zm00001d044479_P001 | Maize | cytosol | 47.68 | 46.84 |
| Os05t0210600-01 | Rice | cytosol | 27.8 | 46.38 |
| HORVU1Hr1G093390.2 | Barley | cytosol | 46.49 | 46.21 |
| GSMUA_Achr3P25160_001 | Banana | cytosol | 49.03 | 46.07 |
| TraesCS3A01G221800.1 | Wheat | cytosol | 47.09 | 45.78 |
| HORVU3Hr1G027650.2 | Barley | mitochondrion | 45.44 | 45.65 |
| TraesCS3B01G251600.1 | Wheat | cytosol, mitochondrion | 46.94 | 45.64 |
| TraesCS3D01G231300.1 | Wheat | cytosol, mitochondrion | 46.94 | 45.64 |
| Zm00001d011352_P001 | Maize | cytosol | 46.34 | 45.52 |
| TraesCS1A01G427400.1 | Wheat | cytosol | 46.94 | 45.05 |
| TraesCS1B01G462300.1 | Wheat | cytosol | 46.64 | 44.96 |
| Os05t0587300-01 | Rice | cytosol | 37.22 | 44.86 |
| HORVU3Hr1G054240.2 | Barley | cytosol, mitochondrion | 46.04 | 44.77 |
| TraesCS1D01G437100.1 | Wheat | nucleus | 46.64 | 44.7 |
| OQU78515 | Sorghum | cytosol | 46.19 | 44.14 |
| GSMUA_AchrUn_... | Banana | endoplasmic reticulum | 33.18 | 44.14 |
| GSMUA_AchrUn_... | Banana | cytosol | 17.34 | 43.28 |
| CDY08814 | Canola | cytosol, plastid | 25.26 | 40.24 |
| CDX78366 | Canola | cytosol | 26.16 | 39.24 |
| CDX81156 | Canola | cytosol | 26.01 | 39.01 |
| CDX97619 | Canola | cytosol | 40.66 | 37.52 |
| CDY32327 | Canola | cytosol | 40.66 | 37.31 |
| CDX98517 | Canola | cytosol | 40.21 | 37.15 |
| CDY20095 | Canola | nucleus | 40.36 | 37.09 |
| CDX85779 | Canola | cytosol | 29.45 | 34.26 |
| CDY40077 | Canola | cytosol | 29.15 | 33.91 |
| CDY40820 | Canola | mitochondrion | 13.9 | 33.1 |
| CDX69861 | Canola | cytosol, mitochondrion | 27.5 | 32.86 |
| CDY21634 | Canola | cytosol, mitochondrion | 27.35 | 32.68 |
| CDY34222 | Canola | cytosol | 14.95 | 32.47 |
| CDX68030 | Canola | cytosol | 24.36 | 32.02 |
| CDX88420 | Canola | cytosol | 25.11 | 31.94 |
| CDX79246 | Canola | cytosol | 24.36 | 31.84 |
| CDX87474 | Canola | cytosol | 24.96 | 31.75 |
| CDY34223 | Canola | cytosol | 15.4 | 31.6 |
| CDY68462 | Canola | cytosol | 27.2 | 30.9 |
| CDY34224 | Canola | cytosol | 2.99 | 28.99 |
| Zm00001d009724_P009 | Maize | cytosol | 43.5 | 27.22 |
| CDY39682 | Canola | cytosol | 9.57 | 23.1 |
| CDX72245 | Canola | cytosol | 8.82 | 22.43 |
| CDY65185 | Canola | cytosol | 8.97 | 21.66 |
| CDY28190 | Canola | extracellular | 2.84 | 18.63 |
| CDX68662 | Canola | endoplasmic reticulum, mitochondrion | 2.84 | 18.63 |
| CDX85780 | Canola | nucleus | 10.76 | 15.19 |
| Zm00001d006366_P001 | Maize | cytosol | 0.15 | 0.43 |
| Zm00001d033961_P001 | Maize | cytosol | 0.15 | 0.43 |
Protein Annotations
| Gene3D:1.25.40.10 | MapMan:11.3.2.5 | Gene3D:3.40.30.10 | GO:A0A078IQ65 | UniProt:A0A078IQ65 | EnsemblPlants:CDY51514 |
| ProteinID:CDY51514 | ProteinID:CDY51514.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005623 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0019725 | GO:GO:0045454 | EnsemblPlantsGene:GSBRNA2T00003612001 |
| InterPro:IPR011990 | InterPro:IPR013026 | InterPro:IPR013766 | InterPro:IPR019734 | PFAM:PF00085 | PFAM:PF00515 |
| PFAM:PF13174 | PFAM:PF13432 | PFscan:PS50005 | PFscan:PS50293 | PANTHER:PTHR22904 | PANTHER:PTHR22904:SF374 |
| SMART:SM00028 | SUPFAM:SSF48452 | SUPFAM:SSF52833 | InterPro:TPR-contain_dom | InterPro:TPR-like_helical_dom_sf | InterPro:TPR_1 |
| InterPro:TPR_repeat | InterPro:Thioredoxin-like_sf | InterPro:Thioredoxin_domain | UniParc:UPI0004EE5C24 | SEG:seg | : |
Description
BnaC04g02370DBnaC04g02370D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IQ65]
Coordinates
chrLK033003:-:17505..20552
Molecular Weight (calculated)
73083.6 Da
IEP (calculated)
8.775
GRAVY (calculated)
-0.400
Length
669 amino acids
Sequence
(BLAST)
(BLAST)
001: MSHSRRLSLE PAITGRFRDS LSLQRHDNDD VINKPDFREL DLGSPVSTLM PRVSSSAATP TSSSGSSGSA SGKPSVAGKS HSGEIPGGPG SVMPAVKNLK
101: PGHRRSSSTG KPLIFSGSSF SHSATSHSCA TSAVSPSPAV LPAGNICPSG RILKTGMATR SSTRAEALCT GTGNYGHGNV VRSGGGGSNH SARADGESPE
201: ELKRLGNDMY RRGNFSEALS LYDRAISLSP ENAAFRSNRA AALTALGRLG EAVKECLEAV RLDPSYSRAH QRLASLYLRL GEADNARRHL CFSGQCPDQT
301: DLQRLQTLEK HLRRCWEARK IGDWRTAIKE TEAAIANGAD SSPQIVACKA EALLRLNQIE DSDFCISSIP RHDHHHSQPQ AKFFGMVAEA YVLCIQSQVD
401: MALGRFESGV VKAERAAMLD QTNPELVSVL NNVKMVVKAR TRGNELFSSG RYSEASVAYG DGLKLDGSNS VLYCNRAACW YKLGLWEKSV EDCDQALKIH
501: PSYIKALLRR AASYGKLGQW EDAVRDYEFV RRELPGDGEV AESLERAKIA VMNRSQESKS LGYNNQVEAV STLDKFKNVI SLPGVSMFHF KSSSNRQCEE
601: ISPFINTLCL RYPLVHFFMV DVEESLALAK AESIRKVPTF KMYKNGDKVK EMICPSHQFL EESIKHFLL
101: PGHRRSSSTG KPLIFSGSSF SHSATSHSCA TSAVSPSPAV LPAGNICPSG RILKTGMATR SSTRAEALCT GTGNYGHGNV VRSGGGGSNH SARADGESPE
201: ELKRLGNDMY RRGNFSEALS LYDRAISLSP ENAAFRSNRA AALTALGRLG EAVKECLEAV RLDPSYSRAH QRLASLYLRL GEADNARRHL CFSGQCPDQT
301: DLQRLQTLEK HLRRCWEARK IGDWRTAIKE TEAAIANGAD SSPQIVACKA EALLRLNQIE DSDFCISSIP RHDHHHSQPQ AKFFGMVAEA YVLCIQSQVD
401: MALGRFESGV VKAERAAMLD QTNPELVSVL NNVKMVVKAR TRGNELFSSG RYSEASVAYG DGLKLDGSNS VLYCNRAACW YKLGLWEKSV EDCDQALKIH
501: PSYIKALLRR AASYGKLGQW EDAVRDYEFV RRELPGDGEV AESLERAKIA VMNRSQESKS LGYNNQVEAV STLDKFKNVI SLPGVSMFHF KSSSNRQCEE
601: ISPFINTLCL RYPLVHFFMV DVEESLALAK AESIRKVPTF KMYKNGDKVK EMICPSHQFL EESIKHFLL
001: MSHSRRLSLE PAIDSITGRF RDLQRNDDDV NKPDFRELDL GSPVSTLMPR GSASSSAAAT PTSSSGSSGS ASGKPSVSSQ MAKRLDDAYK SHSGELSSPG
101: SGMPTTTRIL KPGHRRSSST GTPLIFSGSS FTSATSHTSP QGGGSGATSA VSPNTGVLPA GNICPSGRIL KTGMASRTSS RTETLCTGTG NYGHGNVVRS
201: GGGGGTSGKA VRVAENGENP EELKRMGNDM YRRGSFSEAL SLYDRAILIS PGNAAYRSNR AAALTALRRL GEAVKECLEA VRIDPSYSRA HQRLASLYLR
301: LGEAENARRH ICFSGQCPDQ ADLQRLQTLE KHLRRCWEAR KIGDWKTAIK ETDAAIANGA DSSPQLVACK AEAFLRLKQI EDSDFCVSCI PRLDHHYHSQ
401: PQVKLFGMVV EAYVLCIQAQ VDMALGRFEN AVVKAERAAM LDQTNPEVVS VLNNVKMVVR ARTRGNELFS SGRFSEACVA YGDGLKQDDS NSVLYCNRAA
501: CWYKLGLWEK SVEDCNHALK SQPSYIKALL RRAASYGKLG RWEDAVKDYE FLRRELPGDS EVAESLERAK TVLMNRSQES KSLGFNNEVE AVSTLDKFKK
601: SVALPGVSVF HFKSSSNRQC EEISPFINTL CLRYPLVHFF MVDVEESMAL AKAESIRKVP TFKMYKNGDK VKEMVCPSHQ FLEDSIKHFL L
101: SGMPTTTRIL KPGHRRSSST GTPLIFSGSS FTSATSHTSP QGGGSGATSA VSPNTGVLPA GNICPSGRIL KTGMASRTSS RTETLCTGTG NYGHGNVVRS
201: GGGGGTSGKA VRVAENGENP EELKRMGNDM YRRGSFSEAL SLYDRAILIS PGNAAYRSNR AAALTALRRL GEAVKECLEA VRIDPSYSRA HQRLASLYLR
301: LGEAENARRH ICFSGQCPDQ ADLQRLQTLE KHLRRCWEAR KIGDWKTAIK ETDAAIANGA DSSPQLVACK AEAFLRLKQI EDSDFCVSCI PRLDHHYHSQ
401: PQVKLFGMVV EAYVLCIQAQ VDMALGRFEN AVVKAERAAM LDQTNPEVVS VLNNVKMVVR ARTRGNELFS SGRFSEACVA YGDGLKQDDS NSVLYCNRAA
501: CWYKLGLWEK SVEDCNHALK SQPSYIKALL RRAASYGKLG RWEDAVKDYE FLRRELPGDS EVAESLERAK TVLMNRSQES KSLGFNNEVE AVSTLDKFKK
601: SVALPGVSVF HFKSSSNRQC EEISPFINTL CLRYPLVHFF MVDVEESMAL AKAESIRKVP TFKMYKNGDK VKEMVCPSHQ FLEDSIKHFL L
Arabidopsis Description
TTL3Inactive TPR repeat-containing thioredoxin TTL3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SIN1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.