Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr7P24480_001 | Banana | cytosol | 74.31 | 78.43 |
| GSMUA_AchrUn_... | Banana | cytosol | 30.22 | 77.24 |
| GSMUA_AchrUn_... | Banana | endoplasmic reticulum | 52.7 | 71.77 |
| GSMUA_Achr3P25160_001 | Banana | cytosol | 66.72 | 64.19 |
| GSMUA_Achr10P... | Banana | cytosol | 62.34 | 64.02 |
| HORVU1Hr1G093390.2 | Barley | cytosol | 59.85 | 60.92 |
| EES01073 | Sorghum | cytosol | 60.29 | 60.65 |
| Zm00001d044479_P001 | Maize | cytosol | 60.0 | 60.35 |
| TraesCS1D01G437100.1 | Wheat | nucleus | 61.02 | 59.89 |
| TraesCS3B01G162100.1 | Wheat | cytosol | 58.69 | 59.82 |
| TraesCS1A01G427400.1 | Wheat | cytosol | 60.73 | 59.68 |
| TraesCS1B01G462300.1 | Wheat | cytosol | 60.44 | 59.65 |
| TraesCS3D01G231300.1 | Wheat | cytosol, mitochondrion | 59.71 | 59.45 |
| TraesCS3D01G144600.1 | Wheat | cytosol | 58.54 | 59.41 |
| TraesCS3A01G221800.1 | Wheat | cytosol | 59.42 | 59.16 |
| TraesCS3B01G251600.1 | Wheat | cytosol, mitochondrion | 59.42 | 59.16 |
| VIT_18s0001g09830.t01 | Wine grape | cytosol | 22.77 | 59.09 |
| TraesCS3A01G143000.1 | Wheat | cytosol | 57.81 | 58.93 |
| Zm00001d011352_P001 | Maize | cytosol | 58.54 | 58.88 |
| KRH21985 | Soybean | cytosol | 59.27 | 58.67 |
| Os01t0218200-00 | Rice | plastid | 57.23 | 58.33 |
| KRH27330 | Soybean | cytosol | 59.42 | 58.31 |
| VIT_19s0014g01470.t01 | Wine grape | cytosol | 58.98 | 58.3 |
| Zm00001d008930_P003 | Maize | cytosol | 57.23 | 58.07 |
| Zm00001d039362_P002 | Maize | cytosol | 56.79 | 58.06 |
| Os05t0210600-01 | Rice | cytosol | 33.87 | 57.86 |
| EES02247 | Sorghum | plastid | 57.66 | 57.75 |
| OQU78515 | Sorghum | cytosol | 58.83 | 57.57 |
| HORVU3Hr1G054240.2 | Barley | cytosol, mitochondrion | 57.81 | 57.56 |
| KRH26223 | Soybean | nucleus | 56.5 | 57.25 |
| KRH55099 | Soybean | nucleus | 56.06 | 56.64 |
| CDY25865 | Canola | cytosol | 54.01 | 56.23 |
| Bra038116.1-P | Field mustard | cytosol | 54.01 | 56.23 |
| Os05t0587300-01 | Rice | cytosol | 45.11 | 55.68 |
| CDY45930 | Canola | cytosol | 53.43 | 55.54 |
| HORVU3Hr1G027650.2 | Barley | mitochondrion | 53.87 | 55.41 |
| VIT_12s0028g02240.t01 | Wine grape | cytosol | 56.35 | 54.37 |
| Solyc07g062580.2.1 | Tomato | cytosol | 55.62 | 54.35 |
| Bra030946.1-P | Field mustard | cytosol, plastid | 53.14 | 54.33 |
| CDY02514 | Canola | cytosol, plastid | 53.14 | 54.33 |
| CDY25722 | Canola | cytosol, plastid | 52.85 | 54.27 |
| PGSC0003DMT400032362 | Potato | cytosol | 55.04 | 53.86 |
| PGSC0003DMT400054803 | Potato | cytosol | 22.92 | 53.4 |
| KRH22291 | Soybean | plastid | 44.82 | 52.57 |
| AT1G53300.1 | Thale cress | cytosol | 52.99 | 51.93 |
| Zm00001d004494_P001 | Maize | cytosol, mitochondrion | 16.64 | 51.35 |
| CDY34224 | Canola | cytosol | 5.11 | 50.72 |
| CDY61202 | Canola | cytosol | 48.91 | 49.93 |
| Bra000267.1-P | Field mustard | cytosol | 48.91 | 49.85 |
| Bra007405.1-P | Field mustard | cytosol | 48.91 | 49.78 |
| CDY42827 | Canola | cytosol | 48.76 | 49.78 |
| CDY49237 | Canola | cytosol | 48.47 | 49.78 |
| CDX71941 | Canola | cytosol | 48.91 | 49.7 |
| AT3G58620.1 | Thale cress | cytosol | 49.2 | 49.41 |
| AT2G42580.1 | Thale cress | cytosol | 49.2 | 48.77 |
| CDY55390 | Canola | cytosol | 47.3 | 48.43 |
| CDY51514 | Canola | cytosol | 47.15 | 48.28 |
| Bra004709.1-P | Field mustard | cytosol | 45.69 | 47.64 |
| PGSC0003DMT400054911 | Potato | cytosol | 35.18 | 46.26 |
| PGSC0003DMT400054904 | Potato | cytosol | 40.15 | 45.53 |
| PGSC0003DMT400054902 | Potato | cytosol | 19.85 | 45.48 |
| PGSC0003DMT400054796 | Potato | cytosol, plastid | 40.73 | 45.37 |
| Solyc10g007240.1.1 | Tomato | cytosol | 38.98 | 44.95 |
| KRH27037 | Soybean | nucleus | 44.23 | 44.89 |
| Solyc10g007230.1.1 | Tomato | cytosol | 38.98 | 44.8 |
| Bra023795.1-P | Field mustard | cytosol | 5.69 | 44.32 |
| AT3G14950.1 | Thale cress | cytosol | 46.72 | 43.84 |
| Solyc10g007220.1.1 | Tomato | cytosol | 31.53 | 42.77 |
| Solyc10g007250.1.1 | Tomato | cytosol | 17.37 | 42.65 |
| CDY20095 | Canola | nucleus | 45.11 | 42.45 |
| CDY32327 | Canola | cytosol | 45.11 | 42.39 |
| Solyc10g007420.2.1 | Tomato | cytosol | 26.28 | 42.35 |
| PGSC0003DMT400054909 | Potato | cytosol | 25.11 | 41.75 |
| Bra021583.1-P | Field mustard | nucleus | 45.4 | 41.14 |
| CDX98517 | Canola | cytosol | 43.21 | 40.88 |
| Bra027292.1-P | Field mustard | cytosol | 43.8 | 40.87 |
| CDX97619 | Canola | cytosol | 43.07 | 40.69 |
| PGSC0003DMT400091014 | Potato | nucleus | 34.16 | 38.55 |
| Solyc10g007430.1.1 | Tomato | cytosol, plastid | 21.02 | 38.1 |
| CDY40820 | Canola | mitochondrion | 15.18 | 37.01 |
| CDY34222 | Canola | cytosol | 16.35 | 36.36 |
| GSMUA_Achr3P24690_001 | Banana | cytosol | 35.91 | 36.23 |
| Bra023793.1-P | Field mustard | cytosol | 21.46 | 35.68 |
| Zm00001d009724_P009 | Maize | cytosol | 54.89 | 35.17 |
| CDY34223 | Canola | cytosol | 16.64 | 34.97 |
| GSMUA_Achr11P... | Banana | plastid | 29.78 | 34.87 |
| Bra023794.1-P | Field mustard | cytosol, nucleus, plastid | 16.5 | 34.66 |
| GSMUA_Achr2P02050_001 | Banana | cytosol | 7.88 | 23.68 |
| Zm00001d006366_P001 | Maize | cytosol | 0.58 | 1.72 |
| Zm00001d033961_P001 | Maize | cytosol | 0.58 | 1.72 |
Protein Annotations
| Gene3D:1.25.40.10 | MapMan:11.3.2.5 | Gene3D:3.40.30.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005623 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0019725 | GO:GO:0045454 |
| EnsemblPlantsGene:GSMUA_Achr4G08560_001 | EnsemblPlants:GSMUA_Achr4P08560_001 | EnsemblPlants:GSMUA_Achr4T08560_001 | InterPro:IPR011990 | InterPro:IPR013026 | InterPro:IPR013766 |
| InterPro:IPR019734 | UniProt:M0SM73 | PFAM:PF00085 | PFAM:PF13414 | PFAM:PF13432 | PFscan:PS50005 |
| PFscan:PS50293 | PANTHER:PTHR22904 | PANTHER:PTHR22904:SF395 | SMART:SM00028 | SUPFAM:SSF48452 | SUPFAM:SSF52833 |
| InterPro:TPR-contain_dom | InterPro:TPR-like_helical_dom_sf | InterPro:TPR_repeat | InterPro:Thioredoxin-like_sf | InterPro:Thioredoxin_domain | UniParc:UPI000295B7CE |
| SEG:seg | : | : | : | : | : |
Description
TPR repeat-containing thioredoxin TTL1 [Source:GMGC_GENE;Acc:GSMUA_Achr4G08560_001]
Coordinates
chr4:-:6285503..6289198
Molecular Weight (calculated)
72889.4 Da
IEP (calculated)
8.831
GRAVY (calculated)
-0.316
Length
685 amino acids
Sequence
(BLAST)
(BLAST)
001: MSRAGEMGRP YQKTGLDSGT PGGVEAVADR FKAALTFEEN KPDFPDLGSP VSPLRPHAST QTSSCSTSSG SATSKSVSAT DAAVRKPGAG APDPGRRCHS
101: GELVGEISPT AAEVRDLKAA AHRRSGSGPL IFSGGNGGGG GGGGGGGGGG GGSSTASSPV ANALPAGNIF PSGKIGKTAM MPRTTPRSDV LGSGTGNYGH
201: GSIIRGGMRR LDPQEVTRTG NMHYKKGQYG EALAFYDKAV AMCPESAACR SNRAAALMGL NRLGEAVKEC EEAVRLDPTS GRAHHRLACL NRRLGLVGDA
301: RKHLFLTGQT PDSVELQKLQ AVERHLAKCG DARKIGDWKS TLREADAAIA AGADSSPLLV ASRAESLLHL CHLDEADSVL TRSPKFEDSF PFSTATKIFG
401: MLSFSYFYIV RAQVDMALGR FENAVTAAEK AKQIDTRNIE VAMVLSNIRS VASARAQGNE LFKSGNFAEA CTAYGEGLKH DPSNPVLLCN RAACRSKLGQ
501: WVKSVEDCNE ALRIQPSYTK ALLRRADSYA KLERWAESVR DYEVLRKELP GDNEVAEALF HAQVALKASR GEEVSNLKFG GEVEEVTGAE QFRAAVSLSG
601: ASVVYFMTSL NKQCTQIAPF VDALCTRYPS ANFLKVDVDQ SPVIAKAENV RIVPTFKIYK NGIRVKEMIC PSQQVLEYSV RHYSL
101: GELVGEISPT AAEVRDLKAA AHRRSGSGPL IFSGGNGGGG GGGGGGGGGG GGSSTASSPV ANALPAGNIF PSGKIGKTAM MPRTTPRSDV LGSGTGNYGH
201: GSIIRGGMRR LDPQEVTRTG NMHYKKGQYG EALAFYDKAV AMCPESAACR SNRAAALMGL NRLGEAVKEC EEAVRLDPTS GRAHHRLACL NRRLGLVGDA
301: RKHLFLTGQT PDSVELQKLQ AVERHLAKCG DARKIGDWKS TLREADAAIA AGADSSPLLV ASRAESLLHL CHLDEADSVL TRSPKFEDSF PFSTATKIFG
401: MLSFSYFYIV RAQVDMALGR FENAVTAAEK AKQIDTRNIE VAMVLSNIRS VASARAQGNE LFKSGNFAEA CTAYGEGLKH DPSNPVLLCN RAACRSKLGQ
501: WVKSVEDCNE ALRIQPSYTK ALLRRADSYA KLERWAESVR DYEVLRKELP GDNEVAEALF HAQVALKASR GEEVSNLKFG GEVEEVTGAE QFRAAVSLSG
601: ASVVYFMTSL NKQCTQIAPF VDALCTRYPS ANFLKVDVDQ SPVIAKAENV RIVPTFKIYK NGIRVKEMIC PSQQVLEYSV RHYSL
001: MPKSVKPISE SDKLSDHLRD SSLTSEINKP DFRELDLGSP VSPLRSQPRG LTTTTTTTTT SSSSSSSSGS VTGRIKHAPV IGRSNSVRSQ SNSSSGNNNL
101: RPRSDSATTS SSSHSQPLLS SSSSSATSPA PTSPANVLPT GNICPSGKIQ ITGMTQSRSR SDVLGSGTGT YGHGSIMRGG GISPAKPTNT GGGSNSPVNV
201: GSSSRSSSTV ATGETPIWKK AILGSDSEEV KRVGNEMYRK GLFNEALKLY DRAIALSPTN AAYRSNRAAA LIGLSRIGEA VKECEDAVRS DPNYGRAHHR
301: LALLLIRLGQ VNSARKHLCF LGRPSDPMEL QKLEAVEKHL IKCVDARRVT DWKTVLIEAD AAIVSGADFS PQLFMCKVEA FLKLHRLDDA QSKLLEVPKV
401: EPFPVSCSQT RFSGMACEAY IYFVKAQIEM ALGRFENAVM AAEKASQIDP RCNEVAMLHN TVTLVARARA RGNDLYKSER YTEASSAYAE GLRLDPCNAI
501: LYCNRAACWF KLGMWERSIE DCNQALRYQP SYTKPLLRRA ASNSKMERWG AAVSDYEALI RELPHDKEVA ESLFHAQVAL KKSRGEEVLN MEFGGEVEEI
601: YSLEQFKSAM NLPGVSVIHF STASDHQCKQ ISPFVDSLCT RYPSIHFLKV DIDKCPSIGN AENVRVVPTV KIYKNGSRVK EIVCPSKEVL EYSVRHYSG
101: RPRSDSATTS SSSHSQPLLS SSSSSATSPA PTSPANVLPT GNICPSGKIQ ITGMTQSRSR SDVLGSGTGT YGHGSIMRGG GISPAKPTNT GGGSNSPVNV
201: GSSSRSSSTV ATGETPIWKK AILGSDSEEV KRVGNEMYRK GLFNEALKLY DRAIALSPTN AAYRSNRAAA LIGLSRIGEA VKECEDAVRS DPNYGRAHHR
301: LALLLIRLGQ VNSARKHLCF LGRPSDPMEL QKLEAVEKHL IKCVDARRVT DWKTVLIEAD AAIVSGADFS PQLFMCKVEA FLKLHRLDDA QSKLLEVPKV
401: EPFPVSCSQT RFSGMACEAY IYFVKAQIEM ALGRFENAVM AAEKASQIDP RCNEVAMLHN TVTLVARARA RGNDLYKSER YTEASSAYAE GLRLDPCNAI
501: LYCNRAACWF KLGMWERSIE DCNQALRYQP SYTKPLLRRA ASNSKMERWG AAVSDYEALI RELPHDKEVA ESLFHAQVAL KKSRGEEVLN MEFGGEVEEI
601: YSLEQFKSAM NLPGVSVIHF STASDHQCKQ ISPFVDSLCT RYPSIHFLKV DIDKCPSIGN AENVRVVPTV KIYKNGSRVK EIVCPSKEVL EYSVRHYSG
Arabidopsis Description
TTL1TPR repeat-containing thioredoxin TTL1 [Source:UniProtKB/Swiss-Prot;Acc:Q9MAH1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.