Factsheet for GSMUA_Achr6P07830_001

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi, plasma membrane

Predictor Summary:

nucleus 1
extracellular 4
endoplasmic reticulum 5
vacuole 4
plasma membrane 5
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi, plasma membrane
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	golgi

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr10P...
GSMUA_Achr3P25160_001
GSMUA_Achr4P08560_001
GSMUA_Achr7P24480_001
GSMUA_AchrUn_...
GSMUA_AchrUn_...

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G69420.1	GSMUA_Achr10P...	AT2G42580.1	19000166
AT1G69420.1	GSMUA_Achr3P25160_001	AT2G42580.1	19000166
AT1G69420.1	GSMUA_Achr4P08560_001	AT2G42580.1	19000166
AT1G69420.1	GSMUA_Achr7P24480_001	AT2G42580.1	19000166
AT1G69420.1	GSMUA_AchrUn_...	AT2G42580.1	19000166
AT1G69420.1	GSMUA_AchrUn_...	AT2G42580.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_AchrUn_...	Banana	extracellular, plasma membrane	8.01	89.29
GSMUA_Achr5P16110_001	Banana	plasma membrane	34.13	76.9
GSMUA_Achr10P...	Banana	plasma membrane	51.44	76.25
GSMUA_Achr4P10850_001	Banana	extracellular	4.01	75.76
HORVU3Hr1G033580.1	Barley	plasma membrane	15.71	60.87
CDX95936	Canola	plasma membrane	52.72	59.6
TraesCS4B01G252500.1	Wheat	plasma membrane	55.61	59.32
Os03t0209500-01	Rice	endoplasmic reticulum, golgi, plasma membrane	56.57	59.03
KRH74943	Soybean	plasma membrane	58.49	58.59
TraesCS4A01G051700.1	Wheat	plasma membrane	54.97	58.53
TraesCS2D01G191000.1	Wheat	plasma membrane	57.21	58.43
TraesCS4D01G252800.1	Wheat	plasma membrane	54.81	58.36
TraesCS2A01G183200.1	Wheat	plasma membrane	56.89	58.01
VIT_01s0113g00420.t01	Wine grape	endoplasmic reticulum, golgi, plasma membrane	58.49	57.75
EER99646	Sorghum	plasma membrane	57.05	57.7
KRH70813	Soybean	plasma membrane	57.69	57.6
TraesCS2B01G209800.1	Wheat	golgi	55.93	57.03
HORVU2Hr1G034630.4	Barley	plasma membrane	55.93	57.03
Solyc05g012790.2.1	Tomato	plasma membrane	57.21	56.67
Os10t0337500-01	Rice	plasma membrane	53.85	56.38
CDY40920	Canola	plasma membrane	52.08	56.33
KXG39903	Sorghum	plasma membrane	54.49	56.2
CDY28549	Canola	plasma membrane	51.28	56.04
CDY44067	Canola	plasma membrane	50.96	55.89
KRG89539	Soybean	endoplasmic reticulum, golgi, plasma membrane	54.81	54.98
PGSC0003DMT400072839	Potato	plasma membrane	55.45	54.92
AT1G69420.1	Thale cress	plasma membrane	52.4	54.87
KRH50551	Soybean	plasma membrane	54.33	54.41
HORVU4Hr1G060520.1	Barley	endoplasmic reticulum, plasma membrane, vacuole	16.19	53.44
Bra004380.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	51.12	53.43
Bra038305.1-P	Field mustard	plasma membrane	50.0	52.97
Os07t0596000-01	Rice	plasma membrane	20.83	52.42
CDY51503	Canola	plasma membrane	48.88	51.96
Zm00001d006757_P003	Maize	plasma membrane	55.61	51.79
CDY07350	Canola	plasma membrane	47.44	51.48
Zm00001d022038_P007	Maize	plasma membrane	56.89	51.45
Zm00001d030508_P001	Maize	plasma membrane	47.92	51.2
GSMUA_Achr5P16100_001	Banana	endoplasmic reticulum, extracellular, plasma membrane	22.6	49.13
Bra004000.1-P	Field mustard	cytosol, nucleus, plasma membrane	43.11	48.91
HORVU4Hr1G069190.5	Barley	cytosol, peroxisome	53.53	47.18
Zm00001d028039_P004	Maize	plasma membrane, plastid	53.69	43.85
GSMUA_Achr4P10840_001	Banana	extracellular, mitochondrion, plasma membrane, plastid	15.38	40.17
CDX84493	Canola	cytosol	8.17	36.96
GSMUA_Achr8P33480_001	Banana	endoplasmic reticulum, golgi, plasma membrane	30.13	32.87
GSMUA_Achr7P03550_001	Banana	golgi	28.85	31.97
GSMUA_Achr11P...	Banana	plasma membrane	29.01	30.78
GSMUA_Achr11P...	Banana	golgi	28.53	30.74
GSMUA_Achr1P19020_001	Banana	plasma membrane	21.15	27.73
GSMUA_Achr4P10860_001	Banana	mitochondrion	4.81	8.04

Protein Annotations

EnsemblPlants:GSMUA_Achr6P07830_001	EnsemblPlants:GSMUA_Achr6T07830_001	EnsemblPlantsGene:GSMUA_Achr6G07830_001	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	GO:GO:0016746	GO:GO:0019706	InterPro:Palmitoyltrfase_DHHC
PANTHER:PTHR22883	PANTHER:PTHR22883:SF119	PFAM:PF01529	PFscan:PS50216	SEG:seg	TMHMM:TMhelix
UniParc:UPI000294E987	UniProt:M0T532	MapMan:35.1	:	:	:

Description

Probable S-acyltransferase At1g69420 [Source:GMGC_GENE;Acc:GSMUA_Achr6G07830_001]

Coordinates

chr6:-:5280226..5286362

Molecular Weight (calculated)

69359.1 Da

IEP (calculated)

7.769

GRAVY (calculated)

-0.143

Length

624 amino acids

Sequence
(BLAST)

001: MRKHGWQLPY HPLQVVAIAV FLALGFAFYV FFVPFVGKKL FQYVVMGLYT PLIACVFFLY VWCAATDPGD PGIFKSKKYL KVEDYKERFV SKECKQEGLT
101: KELNVETTAE KQLDGSIDSD AARDELHSRV ESERLPGSTI TWLVVLFSWC GLSFMCNWCQ SHEQSSEEQM SEEGMFYCSL CEVEVLKYSK HCRVCDKCVD
201: GFDHHCRWIN NCIGRKNYKR FFTLMASALL LLILQWSIGL LVLILCFLER KRFSAEIISK LGSSFSLVPF VIVVASCTFL AMVATLPVAQ LFFFHILLIK
301: KGISTYDYII ALREQEQEQE QHAVGEQQSP QMSQVSSFTG LSSTSSFNVI HRGAWCTPPR LFLEDQFDVV PPEIGTSASH TSKKLMAEEP VKRKNAGPVK
401: ISPWTLARLN AEEVSKAAAQ ARKKSKILQP IVRRDNLQGQ DTESSLGSGS GRMVLRSDNR RRMNKRGRVP LDLPLESLAK ISASATESNA SDLAPETSTG
501: LAPLQLEARS AFRPNKPMPS ARVVASSPDS SLDSPDLHPF RDSSSGAEEA QGLNSISITG IIPPNGIQRS RSASDGYEAS GGEDSDRIPS RIVHRSSNWA
601: SIVLSSEHSQ IADDMKASSS ASLL

Best Arabidopsis Sequence Match ( AT1G69420.2 )
(BLAST)

001: MRKHGWQLPY HPLQVVAVAV FLALGFAFYV FFAPFVGKKI HQYIAMGIYT PLITCVVGLY IWCAASDPAD RGVFRSKKYL KIPENGKFPL AKDIKDGCGS
101: ATGGAKSHDG TCVEDTENGS NKKLESSERS SLLRLLCSPC ALLCSCCSGK DESSEQMSED GMFYCSLCEV EVFKYSKHCR VCDKCVDRFD HHCRWLNNCI
201: GKRNYRKFFS LMVSAIFLLI MQWSTGIFVL VLCLLRRNQF NADIALKLGS SFSLIPFVIV VGVCTVLAML ATLPLAQLFF FHILLIKKGI STYDYIVALR
301: EQEQELEAGG GQQSPQMSMI SSFTGLSSAS SFNTFHRGAW CTPPRLFLED QFDVVPPENA SVSSYGKKSV VEERVKKKPQ PVKISPWTLA RLNAEEVSKA
401: AAEARKKSKI IQPVARRENP FVGLEASSSF GSSGRRMFPT KYEGVNNNGK QRRQSKRIRL PAELPLEPLM NVQTKAAMET STSSGLAPLQ LEARSAFQTS
501: RAMSGSGNVM VTSSPESSLD SHDIHPFRVS SEAEDAAQLN GFSSAVGLMG QQRGQQQQQQ LSMMMMPLSR STSDGYDASG GEDSDQVPSR NIHKSR

Arabidopsis Description

PAT22S-acyltransferase [Source:UniProtKB/TrEMBL;Acc:A0A178WF77]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.