Factsheet for Bra038305.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 2
extracellular 4
endoplasmic reticulum 5
vacuole 4
plasma membrane 7
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	nucleus, plasma membrane, plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra000267.1-P
Bra004709.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G69420.1	Bra000267.1-P	AT2G42580.1	19000166
AT1G69420.1	Bra004709.1-P	AT2G42580.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY44067	Canola	plasma membrane	82.34	85.24
CDY28549	Canola	plasma membrane	79.46	81.96
AT1G69420.1	Thale cress	plasma membrane	80.98	80.03
Bra004380.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	78.61	77.55
GSMUA_Achr4P10850_001	Banana	extracellular	4.07	72.73
Bra004000.1-P	Field mustard	cytosol, nucleus, plasma membrane	59.59	63.82
Bra019236.1-P	Field mustard	golgi, plasma membrane	9.34	61.11
GSMUA_Achr10P...	Banana	plasma membrane	43.12	60.33
GSMUA_Achr5P16110_001	Banana	plasma membrane	27.84	59.21
VIT_01s0113g00420.t01	Wine grape	endoplasmic reticulum, golgi, plasma membrane	61.46	57.28
KRH74943	Soybean	plasma membrane	60.44	57.14
KRH70813	Soybean	plasma membrane	60.44	56.96
PGSC0003DMT400072839	Potato	plasma membrane	59.42	55.56
KRG89539	Soybean	endoplasmic reticulum, golgi, plasma membrane	57.05	54.02
Solyc05g012790.2.1	Tomato	plasma membrane	57.56	53.81
KRH50551	Soybean	plasma membrane	55.52	52.49
HORVU3Hr1G033580.1	Barley	plasma membrane	14.09	51.55
GSMUA_Achr6P07830_001	Banana	endoplasmic reticulum, golgi, plasma membrane	52.97	50.0
Os03t0209500-01	Rice	endoplasmic reticulum, golgi, plasma membrane	50.76	50.0
TraesCS4B01G252500.1	Wheat	plasma membrane	49.41	49.74
Os07t0596000-01	Rice	plasma membrane	20.88	49.6
TraesCS4A01G051700.1	Wheat	plasma membrane	49.24	49.49
TraesCS4D01G252800.1	Wheat	plasma membrane	48.9	49.15
HORVU2Hr1G034630.4	Barley	plasma membrane	50.59	48.69
TraesCS2B01G209800.1	Wheat	golgi	50.59	48.69
Os10t0337500-01	Rice	plasma membrane	49.07	48.49
TraesCS2A01G183200.1	Wheat	plasma membrane	50.08	48.2
TraesCS2D01G191000.1	Wheat	plasma membrane	49.92	48.12
KXG39903	Sorghum	plasma membrane	48.39	47.11
Zm00001d030508_P001	Maize	plasma membrane	46.69	47.09
EER99646	Sorghum	plasma membrane	49.07	46.84
HORVU4Hr1G060520.1	Barley	endoplasmic reticulum, plasma membrane, vacuole	14.94	46.56
Zm00001d006757_P003	Maize	plasma membrane	49.92	43.88
Zm00001d022038_P007	Maize	plasma membrane	51.27	43.77
HORVU4Hr1G069190.5	Barley	cytosol, peroxisome	49.24	40.96
Zm00001d028039_P004	Maize	plasma membrane, plastid	49.58	38.22
GSMUA_Achr4P10840_001	Banana	extracellular, mitochondrion, plasma membrane, plastid	14.94	36.82
GSMUA_Achr5P16100_001	Banana	endoplasmic reticulum, extracellular, plasma membrane	15.11	31.01
Bra021866.1-P	Field mustard	plasma membrane	29.03	30.54
Bra008555.1-P	Field mustard	plasma membrane	21.73	25.15
Bra023847.1-P	Field mustard	plasma membrane	26.83	23.48
Bra039566.1-P	Field mustard	endoplasmic reticulum, golgi, plasma membrane	29.54	21.07

Protein Annotations

EnsemblPlants:Bra038305.1	EnsemblPlants:Bra038305.1-P	EnsemblPlantsGene:Bra038305	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	GO:GO:0016746	GO:GO:0019706	InterPro:Palmitoyltrfase_DHHC
PANTHER:PTHR22883	PANTHER:PTHR22883:SF119	PFAM:PF01529	PFscan:PS50216	SEG:seg	TMHMM:TMhelix
UniParc:UPI00025466A6	UniProt:M4FB39	MapMan:35.1	:	:	:

Description

AT1G69420 (E=2e-238) | zinc finger (DHHC type) family protein

Coordinates

chrA02:+:11363570..11366463

Molecular Weight (calculated)

65156.4 Da

IEP (calculated)

9.059

GRAVY (calculated)

-0.221

Length

589 amino acids

Sequence
(BLAST)

001: MRKHGWQLPY HPLQVVAVAV FLALGFAFYV FFAPFVGNKI HQYIAMGIYT PLITCVVGLY IWCAASDPAD PGVFRSKKYL KIPENEKFPQ SKGTKDSCGG
101: SAIGGAKSHD STCVKDQENG TNKKHESSQR SCLLRVLCSP CALICGCCSG RDESSEQQMS EDGMFYCSLC EVEVFKFSKH CRVCDKCVDR FDHHCRWLNN
201: CIGKQNYRKF FSLMVSAIFL LTMQWSTGIF VLVLCLLRRN QFNTDIALKL GSSFSLVPFV IVVAVCTLLA MLATLPVAQL FFFHILLIKK GISTYDYIVA
301: LREQEQELEE GGGGQQSPQM SMISSFTGLS NASSFNTFHR GAWCTPPRLF VEDQFDVVPP ENASVSSYGK KTVVEKRVKK KTQPVKISPW TLARLNAEEV
401: SKAAAEARKR SKIIQPVERR EASSSDRRMF PAKFEAANSN GKQQRRQSKQ RIRLPAELPL MNVQTRVASM ETSTSSGLGP LQLEARSAFQ TSRAMSGSGG
501: VMGTSSSPES SLDSHDIHPF RVSSEAEGSV QLSGFSSAVG LMGQNRGQQQ QQSMMMMMMP LSRSTSGGYD ASGGEDSDQV PSRNIHKSR

Best Arabidopsis Sequence Match ( AT1G69420.2 )
(BLAST)

001: MRKHGWQLPY HPLQVVAVAV FLALGFAFYV FFAPFVGKKI HQYIAMGIYT PLITCVVGLY IWCAASDPAD RGVFRSKKYL KIPENGKFPL AKDIKDGCGS
101: ATGGAKSHDG TCVEDTENGS NKKLESSERS SLLRLLCSPC ALLCSCCSGK DESSEQMSED GMFYCSLCEV EVFKYSKHCR VCDKCVDRFD HHCRWLNNCI
201: GKRNYRKFFS LMVSAIFLLI MQWSTGIFVL VLCLLRRNQF NADIALKLGS SFSLIPFVIV VGVCTVLAML ATLPLAQLFF FHILLIKKGI STYDYIVALR
301: EQEQELEAGG GQQSPQMSMI SSFTGLSSAS SFNTFHRGAW CTPPRLFLED QFDVVPPENA SVSSYGKKSV VEERVKKKPQ PVKISPWTLA RLNAEEVSKA
401: AAEARKKSKI IQPVARRENP FVGLEASSSF GSSGRRMFPT KYEGVNNNGK QRRQSKRIRL PAELPLEPLM NVQTKAAMET STSSGLAPLQ LEARSAFQTS
501: RAMSGSGNVM VTSSPESSLD SHDIHPFRVS SEAEDAAQLN GFSSAVGLMG QQRGQQQQQQ LSMMMMPLSR STSDGYDASG GEDSDQVPSR NIHKSR

Arabidopsis Description

PAT22S-acyltransferase [Source:UniProtKB/TrEMBL;Acc:A0A178WF77]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.