Factsheet for Bra023847.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 2
cytosol 1
plastid 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 3
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus, plastid
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY39504	Canola	endoplasmic reticulum, golgi, plasma membrane	81.58	87.14
AT3G22180.1	Thale cress	plasma membrane	54.98	52.41
GSMUA_Achr7P03550_001	Banana	golgi	38.04	45.47
GSMUA_Achr8P33480_001	Banana	endoplasmic reticulum, golgi, plasma membrane	38.63	45.45
GSMUA_Achr11P...	Banana	golgi	38.93	45.25
VIT_03s0017g01770.t01	Wine grape	plasma membrane	48.14	43.9
KRH24108	Soybean	plasma membrane	46.21	42.08
Solyc05g016030.2.1	Tomato	endoplasmic reticulum, golgi, plasma membrane	45.02	42.08
KRH29083	Soybean	plasma membrane	45.02	41.17
Bra039566.1-P	Field mustard	endoplasmic reticulum, golgi, plasma membrane	49.33	40.19
TraesCS7B01G174700.1	Wheat	golgi	37.44	38.65
TraesCS5B01G368600.1	Wheat	plasma membrane	38.78	37.88
Zm00001d031977_P001	Maize	golgi	38.04	37.54
TraesCS7D01G277000.2	Wheat	golgi	36.4	37.46
TraesCS7A01G277000.1	Wheat	golgi	36.11	37.27
TraesCS5A01G366200.1	Wheat	plasma membrane	37.89	37.01
TraesCS5D01G375800.1	Wheat	plasma membrane	37.89	37.01
HORVU5Hr1G090020.3	Barley	endoplasmic reticulum, plasma membrane	38.63	36.98
KXG35088	Sorghum	golgi	38.93	36.95
KXG25411	Sorghum	golgi	38.34	36.86
Bra021866.1-P	Field mustard	plasma membrane	30.61	36.79
Os09t0563250-01	Rice	plasma membrane	38.19	36.71
HORVU7Hr1G058360.1	Barley	nucleus, peroxisome	37.89	35.92
Bra019236.1-P	Field mustard	golgi, plasma membrane	4.61	34.44
Zm00001d019637_P001	Maize	plasma membrane	38.78	33.16
Bra038305.1-P	Field mustard	plasma membrane	23.48	26.83
Bra004380.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	23.48	26.47
Bra008555.1-P	Field mustard	plasma membrane	18.72	24.75
Bra004000.1-P	Field mustard	cytosol, nucleus, plasma membrane	20.21	24.73

Protein Annotations

EnsemblPlants:Bra023847.1	EnsemblPlants:Bra023847.1-P	EnsemblPlantsGene:Bra023847	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005623	GO:GO:0005886	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	GO:GO:0016746
GO:GO:0019706	InterPro:Palmitoyltrfase_DHHC	PANTHER:PTHR22883	PANTHER:PTHR22883:SF15	PFAM:PF01529	PFscan:PS50216
SEG:seg	TMHMM:TMhelix	UniParc:UPI0002544363	UniProt:M4E4Z3	MapMan:35.1	:

Description

AT3G22180 (E=2e-211) | zinc finger (DHHC type) family protein

Coordinates

chrA01:-:20388618..20392227

Molecular Weight (calculated)

74032.2 Da

IEP (calculated)

8.642

GRAVY (calculated)

-0.180

Length

673 amino acids

Sequence
(BLAST)

001: MDPTWSIKSF KLVVHGGCGI DDNDNLSEKD CYLLGRDVIK SFGSSLVLLA ATEAMVRRHG WQLPADILQM IAVTVFCLLV VAYFAFFAPF AGGRFWEYVL
101: IGVYSPVALL VFVLYVRCTA INPADPRIMT HPLSARDISR SFNESGSQLQ SCPSGVSMSS TFAANSSVVR GSVGDDERVE DSVTRKSCYN PLAIFCCVFV
201: LDDCWKQEEE QGNSRVHNSS KHCKSCDKCV VGFDHHCKWL NNCVGRKNYM TFVSLITASL LWLIIEAAVG VAVIVRVFSD KKRMETEIVN RLGSSFSRAP
301: LAAVVGVCTV VTTPACYHLA QLLFFHTLLI KKGLTTYDYL LAIRAMSETP AGASVDEEIQ SVLYSPTGSG ISGGSSLGPS YRKGVWCTPP RVFDNQDEVI
401: PQLGSHMVPS TVDPERGIKA PKRSVKRSAW KLAKLDANEA ARAAARARAS SSVMRPIHNH PHLPDHELSS VSTDANVAAR KEMRNNGLKP SHSRNSFAAP
501: SQSSRDEYDD ESVTLAPLPQ YSTVNGHRFP TTTDHTHRGN SADPLFLSAP STSLLRDVRK TSVVWDAEAG RYVSSAPVTT MPQVRNRNQR AILPPQGSST
601: LKAHLPLQQA ERRLIYTGDS IFFGGPLVNI QTRNNPRSEV REGQERLAST LHQDARYRRD STSHQLPVFA PPL

Best Arabidopsis Sequence Match ( AT3G22180.1 )
(BLAST)

001: MVRKHGWQLP AHTLQVIAIT VFCLLVVAFY AFFAPFVGGR IWEYVLIGVY SPVAILVFVL YVRCTAINPA DPRIMSIFDT GVNGDGMVRG LSRNYDETGS
101: QLQASPSVVS RSSTVAGNSS VKGSVEDAQR VESVSRRSCY NPLAVFCYVF VVEDCRKKEG PAEEQGNSEE ALFCTLCNCE VRKFSKHCRS CDKCVDCFDH
201: HCKWLNNCVG RKNYVTFVSL MSASLLWLII EAAVGIAVIV RVFVNKQTME TEIVNRLGNS FSRAPLAAVV GLCTAVAIFA CFPLGELLFF HMLLIKKGIT
301: TYEYVVAMRA MSEAPDGASV DEEIQNVLYS PTGSATTGFS GGSSLGLPYR GVWCTPPRVF DNQDEVIPHL DPCMVPSTVD PDAPGSEKGT KALKRPVKRN
401: AWKLAKLDPN EAARAAARAR ASSSVLRPID NRHLPDNDLS SIGTVSIISS VSTDANVAAS KEIRNNDLRS SLSRNSFAPS QGSRDEYDTG SHGMSNLSSP
501: SHVHESVTLA PLPQNPTIVG NRFTATSHHM HSTFDDKVLH RGNDADPLFL FAPATSHLRD VRKTSVVWDP EAGRYVSAPV TTTSEVRNRL LNPSSQTAST
601: QNPRPILPAH DSSSGSSALR DPLPLHQAER RLTYTGDSIF YGGPLINIPT RDTPRSGRGL VRDVQDRLAS TVHRDARIRR DSTSNQLPVF APGGLGANSQ
701: TGSNIK

Arabidopsis Description

PAT20Probable protein S-acyltransferase 20 [Source:UniProtKB/Swiss-Prot;Acc:Q9LIE4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.