Factsheet for Bra004000.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, nucleus, cytosol

Predictor Summary:

nucleus 3
cytosol 1
plasma membrane 3
plastid 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plasma membrane
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus, plasma membrane, plastid
PProwler:	secretory
WoLF PSORT:	nucleus
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra000267.1-P
Bra004709.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G69420.1	Bra000267.1-P	AT2G42580.1	19000166
AT1G69420.1	Bra004709.1-P	AT2G42580.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P10850_001	Banana	extracellular	4.18	69.7
CDY07350	Canola	plasma membrane	69.64	66.61
AT1G69420.1	Thale cress	plasma membrane	70.36	64.93
Bra004380.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	69.09	63.65
Bra038305.1-P	Field mustard	plasma membrane	63.82	59.59
GSMUA_Achr5P16110_001	Banana	plasma membrane	29.27	58.12
GSMUA_Achr10P...	Banana	plasma membrane	40.0	52.26
VIT_01s0113g00420.t01	Wine grape	endoplasmic reticulum, golgi, plasma membrane	56.91	49.53
KRH74943	Soybean	plasma membrane	55.64	49.12
KRH70813	Soybean	plasma membrane	54.73	48.16
HORVU3Hr1G033580.1	Barley	plasma membrane	14.0	47.83
KRG89539	Soybean	endoplasmic reticulum, golgi, plasma membrane	53.82	47.59
PGSC0003DMT400072839	Potato	plasma membrane	53.64	46.83
KRH50551	Soybean	plasma membrane	52.73	46.55
Solyc05g012790.2.1	Tomato	plasma membrane	52.18	45.56
HORVU4Hr1G060520.1	Barley	endoplasmic reticulum, plasma membrane, vacuole	15.09	43.92
GSMUA_Achr6P07830_001	Banana	endoplasmic reticulum, golgi, plasma membrane	48.91	43.11
TraesCS4B01G252500.1	Wheat	plasma membrane	44.18	41.54
Os03t0209500-01	Rice	endoplasmic reticulum, golgi, plasma membrane	45.09	41.47
TraesCS2B01G209800.1	Wheat	golgi	46.0	41.34
HORVU2Hr1G034630.4	Barley	plasma membrane	45.82	41.18
TraesCS2D01G191000.1	Wheat	plasma membrane	45.45	40.92
TraesCS2A01G183200.1	Wheat	plasma membrane	45.45	40.85
TraesCS4D01G252800.1	Wheat	plasma membrane	43.45	40.78
Os10t0337500-01	Rice	plasma membrane	43.82	40.44
TraesCS4A01G051700.1	Wheat	plasma membrane	42.91	40.27
KXG39903	Sorghum	plasma membrane	43.27	39.34
EER99646	Sorghum	plasma membrane	43.45	38.74
Zm00001d030508_P001	Maize	plasma membrane	41.09	38.7
Zm00001d006757_P003	Maize	plasma membrane	45.82	37.61
Zm00001d022038_P007	Maize	plasma membrane	46.55	37.1
Os07t0596000-01	Rice	plasma membrane	15.27	33.87
HORVU4Hr1G069190.5	Barley	cytosol, peroxisome	42.91	33.33
GSMUA_Achr5P16100_001	Banana	endoplasmic reticulum, extracellular, plasma membrane	17.27	33.1
Zm00001d028039_P004	Maize	plasma membrane, plastid	44.0	31.68
GSMUA_Achr4P10840_001	Banana	extracellular, mitochondrion, plasma membrane, plastid	10.91	25.1
Bra021866.1-P	Field mustard	plasma membrane	25.45	25.0
Bra008555.1-P	Field mustard	plasma membrane	20.36	22.0
Bra023847.1-P	Field mustard	plasma membrane	24.73	20.21
Bra039566.1-P	Field mustard	endoplasmic reticulum, golgi, plasma membrane	27.45	18.28
Bra019236.1-P	Field mustard	golgi, plasma membrane	2.36	14.44

Protein Annotations

EnsemblPlants:Bra004000.1	EnsemblPlants:Bra004000.1-P	EnsemblPlantsGene:Bra004000	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	GO:GO:0016746	GO:GO:0019706	InterPro:Palmitoyltrfase_DHHC
PANTHER:PTHR22883	PANTHER:PTHR22883:SF119	PFAM:PF01529	PFscan:PS50216	SEG:seg	TMHMM:TMhelix
UniParc:UPI000254197B	UniProt:M4CIG6	MapMan:35.1	:	:	:

Description

AT1G69420 (E=7e-181) | zinc finger (DHHC type) family protein

Coordinates

chrA07:-:16206929..16209538

Molecular Weight (calculated)

61811.4 Da

IEP (calculated)

8.802

GRAVY (calculated)

-0.269

Length

550 amino acids

Sequence
(BLAST)

001: MGIYSPLLKP STLEFSYLHK MWYHYTHLTL SSYVNMESLK IVFYFFPFWM DPADRGVFRS KKYLKVPENG KFPQSKYTKN GCGSTTVGAK SHDQESRTKK
101: KLESSQRSSL LRLLCSPCAM LCCCCSGRGE SSELQTSEDV MFYCSLCEVE VFKYSKHCRV CDKCVDSFDH HCRWINNCIG KRNYRKFFSL MVSAIFLLIM
201: QWLTGIYVLV LCLLRRNQFN ADIALKLGSS FSLVPFVIVV GACTLLAMLA TLPLPQLFFF HILLIKKGII TYDYIVALRE QEQELEAGGG QQSPQMSMIS
301: SFTGLSSASS FNAFHRGAWC TPPRLFVEDQ FDVVPPENAS VSSYGKKTVV AEEHVKKKTQ PVKISPWTLA RLNAEEVSKA AAEARKKSKI IQPVARRENP
401: FLGIEASSSG RRMFPAKSEA VNSNRKQRRH QSKRIRLPAE PLMNVQSRAG LAPLQLEARS AFRTNREMSG SGGGVMITSS PESSLEDLHD IHPFRVSSEA
501: EDSMQLNGFS SAVGLMGQQR EEEEQQQSMM MSLSRSTSDG YDASGGEDSD

Best Arabidopsis Sequence Match ( AT1G69420.2 )
(BLAST)

001: MRKHGWQLPY HPLQVVAVAV FLALGFAFYV FFAPFVGKKI HQYIAMGIYT PLITCVVGLY IWCAASDPAD RGVFRSKKYL KIPENGKFPL AKDIKDGCGS
101: ATGGAKSHDG TCVEDTENGS NKKLESSERS SLLRLLCSPC ALLCSCCSGK DESSEQMSED GMFYCSLCEV EVFKYSKHCR VCDKCVDRFD HHCRWLNNCI
201: GKRNYRKFFS LMVSAIFLLI MQWSTGIFVL VLCLLRRNQF NADIALKLGS SFSLIPFVIV VGVCTVLAML ATLPLAQLFF FHILLIKKGI STYDYIVALR
301: EQEQELEAGG GQQSPQMSMI SSFTGLSSAS SFNTFHRGAW CTPPRLFLED QFDVVPPENA SVSSYGKKSV VEERVKKKPQ PVKISPWTLA RLNAEEVSKA
401: AAEARKKSKI IQPVARRENP FVGLEASSSF GSSGRRMFPT KYEGVNNNGK QRRQSKRIRL PAELPLEPLM NVQTKAAMET STSSGLAPLQ LEARSAFQTS
501: RAMSGSGNVM VTSSPESSLD SHDIHPFRVS SEAEDAAQLN GFSSAVGLMG QQRGQQQQQQ LSMMMMPLSR STSDGYDASG GEDSDQVPSR NIHKSR

Arabidopsis Description

PAT22S-acyltransferase [Source:UniProtKB/TrEMBL;Acc:A0A178WF77]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.