Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 2
- extracellular 3
- endoplasmic reticulum 4
- vacuole 3
- plasma membrane 5
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G69420.1 | EES01073 | AT2G42580.1 | 19000166 |
| AT1G69420.1 | EES02247 | AT2G42580.1 | 19000166 |
| AT1G69420.1 | OQU78515 | AT2G42580.1 | 19000166 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G191000.1 | Wheat | plasma membrane | 76.5 | 77.25 |
| TraesCS2A01G183200.1 | Wheat | plasma membrane | 76.01 | 76.63 |
| Zm00001d006757_P003 | Maize | plasma membrane | 83.14 | 76.57 |
| TraesCS2B01G209800.1 | Wheat | golgi | 74.55 | 75.16 |
| HORVU2Hr1G034630.4 | Barley | plasma membrane | 74.39 | 75.0 |
| Zm00001d022038_P007 | Maize | plasma membrane | 82.98 | 74.2 |
| GSMUA_Achr4P10850_001 | Banana | extracellular | 3.89 | 72.73 |
| HORVU3Hr1G033580.1 | Barley | plasma membrane | 17.5 | 67.08 |
| GSMUA_Achr5P16110_001 | Banana | plasma membrane | 28.36 | 63.18 |
| Os07t0596000-01 | Rice | plasma membrane | 24.64 | 61.29 |
| GSMUA_Achr10P... | Banana | plasma membrane | 41.82 | 61.28 |
| HORVU4Hr1G060520.1 | Barley | endoplasmic reticulum, plasma membrane, vacuole | 18.64 | 60.85 |
| GSMUA_Achr6P07830_001 | Banana | endoplasmic reticulum, golgi, plasma membrane | 57.7 | 57.05 |
| KXG39903 | Sorghum | plasma membrane | 54.3 | 55.37 |
| CDX95936 | Canola | plasma membrane | 48.62 | 54.35 |
| KRH74943 | Soybean | plasma membrane | 54.62 | 54.09 |
| KRH70813 | Soybean | plasma membrane | 54.46 | 53.76 |
| VIT_01s0113g00420.t01 | Wine grape | endoplasmic reticulum, golgi, plasma membrane | 53.97 | 52.69 |
| CDY40920 | Canola | plasma membrane | 48.14 | 51.47 |
| Solyc05g012790.2.1 | Tomato | plasma membrane | 52.51 | 51.43 |
| CDY28549 | Canola | plasma membrane | 47.49 | 51.31 |
| KRG89539 | Soybean | endoplasmic reticulum, golgi, plasma membrane | 51.7 | 51.29 |
| CDY44067 | Canola | plasma membrane | 47.0 | 50.97 |
| PGSC0003DMT400072839 | Potato | plasma membrane | 52.03 | 50.95 |
| AT1G69420.1 | Thale cress | plasma membrane | 48.46 | 50.17 |
| Bra004380.1-P | Field mustard | endoplasmic reticulum, plasma membrane, vacuole | 48.46 | 50.08 |
| KRH50551 | Soybean | plasma membrane | 50.57 | 50.08 |
| Bra038305.1-P | Field mustard | plasma membrane | 46.84 | 49.07 |
| CDY51503 | Canola | plasma membrane | 45.7 | 48.04 |
| CDY07350 | Canola | plasma membrane | 44.41 | 47.65 |
| Bra004000.1-P | Field mustard | cytosol, nucleus, plasma membrane | 38.74 | 43.45 |
| GSMUA_Achr5P16100_001 | Banana | endoplasmic reticulum, extracellular, plasma membrane | 19.29 | 41.46 |
| GSMUA_Achr4P10840_001 | Banana | extracellular, mitochondrion, plasma membrane, plastid | 15.88 | 41.0 |
| CDX84493 | Canola | cytosol | 8.27 | 36.96 |
| EES12729 | Sorghum | golgi | 29.34 | 29.43 |
| KXG35088 | Sorghum | golgi | 31.93 | 27.79 |
| KXG25411 | Sorghum | golgi | 29.82 | 26.29 |
| KXG30910 | Sorghum | peroxisome | 21.88 | 24.41 |
Protein Annotations
| MapMan:35.1 | EntrezGene:8078996 | UniProt:C5XD73 | EnsemblPlants:EER99646 | ProteinID:EER99646 | ProteinID:EER99646.1 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016740 |
| GO:GO:0016746 | GO:GO:0019706 | PFAM:PF01529 | PFscan:PS50216 | PANTHER:PTHR22883 | PANTHER:PTHR22883:SF119 |
| MetaCyc:PWY-7420 | InterPro:Palmitoyltrfase_DHHC | EnsemblPlantsGene:SORBI_3002G362700 | TMHMM:TMhelix | UniParc:UPI0001A83CA1 | RefSeq:XP_002463125.1 |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr2:-:72370166..72375420
Molecular Weight (calculated)
67894.1 Da
IEP (calculated)
8.925
GRAVY (calculated)
-0.155
Length
617 amino acids
Sequence
(BLAST)
(BLAST)
001: MRRHGWQLPY HPLQVVAVSV FLALAFAFYV FFAPFVGRKV FQYVVMGLYT PLVLCVFFLY IWCAAANPAD PGVFKSKKYL SLYGSGKHRH LNESRKGSSD
101: ARLQLVGTGE KQEHEVAPSG EKSMTQHKDK NSSCLSSTFS AFLLLFYPLS FVFSCCQSHE WSSEQQGSEE GMFFCSLCEV QVLKYSKHCR VCDKCVDGFD
201: HHCRWLNNCI GRRNYRRFFI LMSTALILLI LQSAIGVLVL VLCFVERKEF SMQIVSKLGS SFSVVPFVIV VASCTILAMV ASLPIAQLLF FHILLIKKGI
301: STYDYIIALR EQEQDDLSGQ QSPQMSRVSS YTGLSSTSSF GPLRRGSWCT PPRLFLEDQF DVIPSEAASS HNSSMKRKED EGKRKKGSGA VKISPWALAR
401: LNAEEVSRVA AEARKKSKVL VPIRKDDYSR GHETDSSYGG MSSGRIDLGP DSKRTNRRGR QPSDLSLKPV AKISTDAIDS TSSDMAPEAM SNLAPLQLEA
501: RSAFHPSRAA SSVNVGGSSP DSSLDSPDLH LYRVSAVSSS GAEDLQLTAL TAPGSTPPQG IQLSRSTSDG YEASGGEDSD RIPSRIVHRS SNWANIILNS
601: DQSASSSGIL VPKNRLS
101: ARLQLVGTGE KQEHEVAPSG EKSMTQHKDK NSSCLSSTFS AFLLLFYPLS FVFSCCQSHE WSSEQQGSEE GMFFCSLCEV QVLKYSKHCR VCDKCVDGFD
201: HHCRWLNNCI GRRNYRRFFI LMSTALILLI LQSAIGVLVL VLCFVERKEF SMQIVSKLGS SFSVVPFVIV VASCTILAMV ASLPIAQLLF FHILLIKKGI
301: STYDYIIALR EQEQDDLSGQ QSPQMSRVSS YTGLSSTSSF GPLRRGSWCT PPRLFLEDQF DVIPSEAASS HNSSMKRKED EGKRKKGSGA VKISPWALAR
401: LNAEEVSRVA AEARKKSKVL VPIRKDDYSR GHETDSSYGG MSSGRIDLGP DSKRTNRRGR QPSDLSLKPV AKISTDAIDS TSSDMAPEAM SNLAPLQLEA
501: RSAFHPSRAA SSVNVGGSSP DSSLDSPDLH LYRVSAVSSS GAEDLQLTAL TAPGSTPPQG IQLSRSTSDG YEASGGEDSD RIPSRIVHRS SNWANIILNS
601: DQSASSSGIL VPKNRLS
001: MRKHGWQLPY HPLQVVAVAV FLALGFAFYV FFAPFVGKKI HQYIAMGIYT PLITCVVGLY IWCAASDPAD RGVFRSKKYL KIPENGKFPL AKDIKDGCGS
101: ATGGAKSHDG TCVEDTENGS NKKLESSERS SLLRLLCSPC ALLCSCCSGK DESSEQMSED GMFYCSLCEV EVFKYSKHCR VCDKCVDRFD HHCRWLNNCI
201: GKRNYRKFFS LMVSAIFLLI MQWSTGIFVL VLCLLRRNQF NADIALKLGS SFSLIPFVIV VGVCTVLAML ATLPLAQLFF FHILLIKKGI STYDYIVALR
301: EQEQELEAGG GQQSPQMSMI SSFTGLSSAS SFNTFHRGAW CTPPRLFLED QFDVVPPENA SVSSYGKKSV VEERVKKKPQ PVKISPWTLA RLNAEEVSKA
401: AAEARKKSKI IQPVARRENP FVGLEASSSF GSSGRRMFPT KYEGVNNNGK QRRQSKRIRL PAELPLEPLM NVQTKAAMET STSSGLAPLQ LEARSAFQTS
501: RAMSGSGNVM VTSSPESSLD SHDIHPFRVS SEAEDAAQLN GFSSAVGLMG QQRGQQQQQQ LSMMMMPLSR STSDGYDASG GEDSDQVPSR NIHKSR
101: ATGGAKSHDG TCVEDTENGS NKKLESSERS SLLRLLCSPC ALLCSCCSGK DESSEQMSED GMFYCSLCEV EVFKYSKHCR VCDKCVDRFD HHCRWLNNCI
201: GKRNYRKFFS LMVSAIFLLI MQWSTGIFVL VLCLLRRNQF NADIALKLGS SFSLIPFVIV VGVCTVLAML ATLPLAQLFF FHILLIKKGI STYDYIVALR
301: EQEQELEAGG GQQSPQMSMI SSFTGLSSAS SFNTFHRGAW CTPPRLFLED QFDVVPPENA SVSSYGKKSV VEERVKKKPQ PVKISPWTLA RLNAEEVSKA
401: AAEARKKSKI IQPVARRENP FVGLEASSSF GSSGRRMFPT KYEGVNNNGK QRRQSKRIRL PAELPLEPLM NVQTKAAMET STSSGLAPLQ LEARSAFQTS
501: RAMSGSGNVM VTSSPESSLD SHDIHPFRVS SEAEDAAQLN GFSSAVGLMG QQRGQQQQQQ LSMMMMPLSR STSDGYDASG GEDSDQVPSR NIHKSR
Arabidopsis Description
PAT22S-acyltransferase [Source:UniProtKB/TrEMBL;Acc:A0A178WF77]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.