Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 4
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 7
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G69420.1 | CDY42827 | AT2G42580.1 | 19000166 |
| AT1G69420.1 | CDY51514 | AT2G42580.1 | 19000166 |
| AT1G69420.1 | CDY55390 | AT2G42580.1 | 19000166 |
| AT1G69420.1 | CDY61202 | AT2G42580.1 | 19000166 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY44067 | Canola | plasma membrane | 89.32 | 89.63 |
| CDX95936 | Canola | plasma membrane | 80.21 | 82.97 |
| Bra038305.1-P | Field mustard | plasma membrane | 81.96 | 79.46 |
| CDY40920 | Canola | plasma membrane | 77.41 | 76.6 |
| AT1G69420.1 | Thale cress | plasma membrane | 76.88 | 73.66 |
| GSMUA_Achr4P10850_001 | Banana | extracellular | 4.2 | 72.73 |
| CDY51503 | Canola | plasma membrane | 74.08 | 72.06 |
| CDY07350 | Canola | plasma membrane | 69.7 | 69.22 |
| GSMUA_Achr10P... | Banana | plasma membrane | 44.66 | 60.57 |
| CDX74717 | Canola | golgi, plasma membrane | 9.46 | 60.0 |
| GSMUA_Achr5P16110_001 | Banana | plasma membrane | 28.37 | 58.48 |
| KRH74943 | Soybean | plasma membrane | 63.4 | 58.11 |
| KRH70813 | Soybean | plasma membrane | 63.05 | 57.6 |
| VIT_01s0113g00420.t01 | Wine grape | endoplasmic reticulum, golgi, plasma membrane | 62.35 | 56.33 |
| HORVU3Hr1G033580.1 | Barley | plasma membrane | 15.76 | 55.9 |
| Solyc05g012790.2.1 | Tomato | plasma membrane | 60.6 | 54.92 |
| KRG89539 | Soybean | endoplasmic reticulum, golgi, plasma membrane | 59.72 | 54.82 |
| PGSC0003DMT400072839 | Potato | plasma membrane | 60.25 | 54.6 |
| KRH50551 | Soybean | plasma membrane | 58.67 | 53.77 |
| GSMUA_Achr6P07830_001 | Banana | endoplasmic reticulum, golgi, plasma membrane | 56.04 | 51.28 |
| CDX84493 | Canola | cytosol | 12.26 | 50.72 |
| Os03t0209500-01 | Rice | endoplasmic reticulum, golgi, plasma membrane | 52.89 | 50.5 |
| HORVU4Hr1G060520.1 | Barley | endoplasmic reticulum, plasma membrane, vacuole | 16.64 | 50.26 |
| Os10t0337500-01 | Rice | plasma membrane | 52.19 | 50.0 |
| Os07t0596000-01 | Rice | plasma membrane | 21.72 | 50.0 |
| TraesCS4B01G252500.1 | Wheat | plasma membrane | 50.96 | 49.74 |
| TraesCS4D01G252800.1 | Wheat | plasma membrane | 50.96 | 49.66 |
| TraesCS4A01G051700.1 | Wheat | plasma membrane | 50.44 | 49.15 |
| TraesCS2A01G183200.1 | Wheat | plasma membrane | 52.54 | 49.02 |
| TraesCS2D01G191000.1 | Wheat | plasma membrane | 52.36 | 48.94 |
| TraesCS2B01G209800.1 | Wheat | golgi | 51.84 | 48.37 |
| HORVU2Hr1G034630.4 | Barley | plasma membrane | 51.31 | 47.88 |
| KXG39903 | Sorghum | plasma membrane | 50.44 | 47.6 |
| EER99646 | Sorghum | plasma membrane | 51.31 | 47.49 |
| Zm00001d030508_P001 | Maize | plasma membrane | 47.64 | 46.58 |
| Zm00001d006757_P003 | Maize | plasma membrane | 51.31 | 43.73 |
| Zm00001d022038_P007 | Maize | plasma membrane | 52.54 | 43.48 |
| HORVU4Hr1G069190.5 | Barley | cytosol, peroxisome | 50.26 | 40.54 |
| Zm00001d028039_P004 | Maize | plasma membrane, plastid | 50.09 | 37.43 |
| GSMUA_Achr4P10840_001 | Banana | extracellular, mitochondrion, plasma membrane, plastid | 14.89 | 35.56 |
| CDY37703 | Canola | plasma membrane | 29.07 | 34.16 |
| GSMUA_Achr5P16100_001 | Banana | endoplasmic reticulum, extracellular, plasma membrane | 16.29 | 32.4 |
| CDY23719 | Canola | plasma membrane | 28.55 | 29.69 |
| CDY47797 | Canola | plasma membrane | 31.17 | 27.47 |
| CDY58751 | Canola | endoplasmic reticulum, golgi, plasma membrane | 30.3 | 26.86 |
| CDY39504 | Canola | endoplasmic reticulum, golgi, plasma membrane | 28.72 | 26.03 |
| CDX97254 | Canola | plasma membrane | 22.59 | 25.34 |
| CDY01925 | Canola | golgi | 22.42 | 25.15 |
| CDY22939 | Canola | golgi | 31.35 | 24.06 |
Protein Annotations
| KEGG:00561+2.3.1.22 | MapMan:35.1 | GO:A0A078GTR9 | UniProt:A0A078GTR9 | EnsemblPlants:CDY28549 | ProteinID:CDY28549 |
| ProteinID:CDY28549.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0016740 | GO:GO:0016746 | GO:GO:0019706 | EnsemblPlantsGene:GSBRNA2T00040486001 | PFAM:PF01529 | PFscan:PS50216 |
| PANTHER:PTHR22883 | PANTHER:PTHR22883:SF119 | MetaCyc:PWY-7420 | InterPro:Palmitoyltrfase_DHHC | TMHMM:TMhelix | UniParc:UPI0004EE260F |
| SEG:seg | : | : | : | : | : |
Description
BnaC02g19180DS-acyltransferase [Source:UniProtKB/TrEMBL;Acc:A0A078GTR9]
Coordinates
chrLK032222:+:67060..70797
Molecular Weight (calculated)
63442.3 Da
IEP (calculated)
9.035
GRAVY (calculated)
-0.231
Length
571 amino acids
Sequence
(BLAST)
(BLAST)
001: MRKHGWQLPY HPLQVVAVAV FLALGFAFYV FFAPFVGNKI HQYIVMGIYT PLITCVVGLY IWCVASDSAD PGVFRSKKYL KIPENEKFTQ SKGTKDSCGG
101: SAIGGAKSHD STCVNDQENG TNKKQESSQR SRLLRVLCSP CALICGCCSG RDESSEQQIS EDGMFYCSLC EVEVFKYSKH CRVCDKCVDR FDHHCRWLNN
201: CIGKRNYRKF FSLMVSAIFL LIMQWSTGIF VLVLCLLRRN QFHTDIALKL GSSFSLVPFV IVVAVCTLLA MLATLPVAQL FFFHILLIKK GISTYDYIVA
301: LREQEQELEE GGGGQQSPQM SMISSFTGLS SASSFNTFHR GAWCTPPRLF VEDQFDVVPP ENASVSSYGK KTVVEERVKK KTQPVKISPW TLARLNAEEV
401: SKAAAEARKR SKIIQPVERR EASSSDRRKF PAKLEAGNTN GKQQRRQSKQ RIRLPAELPL MNVQTRIASM ETSTSSGLGP LQLEARSAFQ TSRAMSGSGG
501: VMGTSSPESS LDSHDIHPFR VSSEAEGSAQ QQQQSMMMMM MPLSRSTSGG YDASGGEDSD QVPSRNIHKS R
101: SAIGGAKSHD STCVNDQENG TNKKQESSQR SRLLRVLCSP CALICGCCSG RDESSEQQIS EDGMFYCSLC EVEVFKYSKH CRVCDKCVDR FDHHCRWLNN
201: CIGKRNYRKF FSLMVSAIFL LIMQWSTGIF VLVLCLLRRN QFHTDIALKL GSSFSLVPFV IVVAVCTLLA MLATLPVAQL FFFHILLIKK GISTYDYIVA
301: LREQEQELEE GGGGQQSPQM SMISSFTGLS SASSFNTFHR GAWCTPPRLF VEDQFDVVPP ENASVSSYGK KTVVEERVKK KTQPVKISPW TLARLNAEEV
401: SKAAAEARKR SKIIQPVERR EASSSDRRKF PAKLEAGNTN GKQQRRQSKQ RIRLPAELPL MNVQTRIASM ETSTSSGLGP LQLEARSAFQ TSRAMSGSGG
501: VMGTSSPESS LDSHDIHPFR VSSEAEGSAQ QQQQSMMMMM MPLSRSTSGG YDASGGEDSD QVPSRNIHKS R
001: MRKHGWQLPY HPLQVVAVAV FLALGFAFYV FFAPFVGKKI HQYIAMGIYT PLITCVVGLY IWCAASDPAD RGVFRSKKYL KIPENGKFPL AKDIKDGCGS
101: ATGGAKSHDG TCVEDTENGS NKKLESSERS SLLRLLCSPC ALLCSCCSGK DESSEQMSED GMFYCSLCEV EVFKYSKHCR VCDKCVDRFD HHCRWLNNCI
201: GKRNYRKFFS LMVSAIFLLI MQWSTGIFVL VLCLLRRNQF NADIALKLGS SFSLIPFVIV VGVCTVLAML ATLPLAQLFF FHILLIKKGI STYDYIVALR
301: EQEQELEAGG GQQSPQMSMI SSFTGLSSAS SFNTFHRGAW CTPPRLFLED QFDVVPPENA SVSSYGKKSV VEERVKKKPQ PVKISPWTLA RLNAEEVSKA
401: AAEARKKSKI IQPVARRENP FVGLEASSSF GSSGRRMFPT KYEGVNNNGK QRRQSKRIRL PAELPLEPLM NVQTKAAMET STSSGLAPLQ LEARSAFQTS
501: RAMSGSGNVM VTSSPESSLD SHDIHPFRVS SEAEDAAQLN GFSSAVGLMG QQRGQQQQQQ LSMMMMPLSR STSDGYDASG GEDSDQVPSR NIHKSR
101: ATGGAKSHDG TCVEDTENGS NKKLESSERS SLLRLLCSPC ALLCSCCSGK DESSEQMSED GMFYCSLCEV EVFKYSKHCR VCDKCVDRFD HHCRWLNNCI
201: GKRNYRKFFS LMVSAIFLLI MQWSTGIFVL VLCLLRRNQF NADIALKLGS SFSLIPFVIV VGVCTVLAML ATLPLAQLFF FHILLIKKGI STYDYIVALR
301: EQEQELEAGG GQQSPQMSMI SSFTGLSSAS SFNTFHRGAW CTPPRLFLED QFDVVPPENA SVSSYGKKSV VEERVKKKPQ PVKISPWTLA RLNAEEVSKA
401: AAEARKKSKI IQPVARRENP FVGLEASSSF GSSGRRMFPT KYEGVNNNGK QRRQSKRIRL PAELPLEPLM NVQTKAAMET STSSGLAPLQ LEARSAFQTS
501: RAMSGSGNVM VTSSPESSLD SHDIHPFRVS SEAEDAAQLN GFSSAVGLMG QQRGQQQQQQ LSMMMMPLSR STSDGYDASG GEDSDQVPSR NIHKSR
Arabidopsis Description
PAT22S-acyltransferase [Source:UniProtKB/TrEMBL;Acc:A0A178WF77]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.