Factsheet for TraesCS2B01G209800.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 4
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	golgi
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	golgi

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS1A01G427400.1
TraesCS1B01G462300.1
TraesCS1D01G437100.1
TraesCS3A01G143000.1
TraesCS3A01G221800.1
TraesCS3B01G162100.1
TraesCS3B01G251600.1
TraesCS3D01G144600.1
TraesCS3D01G231300.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G69420.1	TraesCS1A01G427400.1	AT2G42580.1	19000166
AT1G69420.1	TraesCS1B01G462300.1	AT2G42580.1	19000166
AT1G69420.1	TraesCS1D01G437100.1	AT2G42580.1	19000166
AT1G69420.1	TraesCS3A01G143000.1	AT2G42580.1	19000166
AT1G69420.1	TraesCS3A01G221800.1	AT2G42580.1	19000166
AT1G69420.1	TraesCS3B01G162100.1	AT2G42580.1	19000166
AT1G69420.1	TraesCS3B01G251600.1	AT2G42580.1	19000166
AT1G69420.1	TraesCS3D01G144600.1	AT2G42580.1	19000166
AT1G69420.1	TraesCS3D01G231300.1	AT2G42580.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU2Hr1G034630.4	Barley	plasma membrane	97.55	97.55
TraesCS2D01G191000.1	Wheat	plasma membrane	92.65	92.8
TraesCS2A01G183200.1	Wheat	plasma membrane	92.16	92.16
EER99646	Sorghum	plasma membrane	75.16	74.55
Zm00001d006757_P003	Maize	plasma membrane	80.88	73.88
GSMUA_Achr4P10850_001	Banana	extracellular	3.92	72.73
Zm00001d022038_P007	Maize	plasma membrane	80.39	71.3
Os07t0596000-01	Rice	plasma membrane	28.76	70.97
HORVU3Hr1G033580.1	Barley	plasma membrane	18.63	70.81
HORVU4Hr1G060520.1	Barley	endoplasmic reticulum, plasma membrane, vacuole	19.61	63.49
GSMUA_Achr5P16110_001	Banana	plasma membrane	28.43	62.82
GSMUA_Achr10P...	Banana	plasma membrane	41.99	61.05
GSMUA_Achr6P07830_001	Banana	endoplasmic reticulum, golgi, plasma membrane	57.03	55.93
TraesCS4B01G252500.1	Wheat	plasma membrane	52.94	55.38
VIT_01s0113g00420.t01	Wine grape	endoplasmic reticulum, golgi, plasma membrane	57.03	55.22
CDX95936	Canola	plasma membrane	49.51	54.89
CDY40920	Canola	plasma membrane	51.47	54.59
KRH74943	Soybean	plasma membrane	54.9	53.93
KRH70813	Soybean	plasma membrane	54.25	53.12
PGSC0003DMT400072839	Potato	plasma membrane	54.41	52.86
AT1G69420.1	Thale cress	plasma membrane	50.98	52.35
CDY28549	Canola	plasma membrane	48.37	51.84
Bra004380.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	50.49	51.76
Solyc05g012790.2.1	Tomato	plasma membrane	53.27	51.75
CDY44067	Canola	plasma membrane	47.88	51.49
KRG89539	Soybean	endoplasmic reticulum, golgi, plasma membrane	51.96	51.13
Bra038305.1-P	Field mustard	plasma membrane	48.69	50.59
CDY51503	Canola	plasma membrane	47.88	49.91
KRH50551	Soybean	plasma membrane	50.16	49.28
CDY07350	Canola	plasma membrane	44.93	47.83
Bra004000.1-P	Field mustard	cytosol, nucleus, plasma membrane	41.34	46.0
GSMUA_Achr5P16100_001	Banana	endoplasmic reticulum, extracellular, plasma membrane	18.95	40.42
GSMUA_Achr4P10840_001	Banana	extracellular, mitochondrion, plasma membrane, plastid	15.2	38.91
CDX84493	Canola	cytosol	8.5	37.68
TraesCS2B01G477400.1	Wheat	golgi	30.23	30.13
TraesCS5B01G368600.1	Wheat	plasma membrane	31.54	28.01
TraesCS7B01G174700.1	Wheat	golgi	29.09	27.3
TraesCS7B01G258200.1	Wheat	golgi	22.39	26.55
TraesCS5B01G368700.1	Wheat	nucleus	6.54	12.78

Protein Annotations

EnsemblPlants:TraesCS2B01G209800.1	EnsemblPlantsGene:TraesCS2B01G209800	InterPro:Palmitoyltrfase_DHHC	PANTHER:PTHR22883	PANTHER:PTHR22883:SF119	PFAM:PF01529
PFscan:PS50216	SEG:seg	TMHMM:TMhelix	MapMan:35.1	:	:

Description

No Description!

Coordinates

chr2B:+:192359982..192365435

Molecular Weight (calculated)

67644.9 Da

IEP (calculated)

8.474

GRAVY (calculated)

-0.126

Length

612 amino acids

Sequence
(BLAST)

001: MRRHGWQLPY HPLQVVAVSV FVALAFAFYV FFAPFVGRKV FQDAAMGLYT PLVLCVFFLY IWCAATDPAD PGVFKSKKYQ RLYGGCKHRR LKESIQGVSD
101: VGLRLEGTGE KREHEVADAN EKSMTELKNK SSSCCSAIFS AFLLIFRPLS FVFSCCQSRE WSSEQQDSED GMFFCSLCEV EVLKYSKHCR VCDKCVDGFD
201: HHCRWLNNCI GKRNYRRFFL LMTTALFLLI LQSATGVLVL VLCFVQRKEF SMQIVSKLGS SFSVAPFIIV VASCTILAMI ALLPIAQLLF FHILLIKKGI
301: STYDYIIALR EQEQEEVSGE QSPQMSHVSS YGGLSSTSSF GALRRGSWCT PPRLFLEDQF DVIPSEAGSS HNSATKRKDE EVRRKKTSGA VKISPWALAR
401: LNAEEVSRVA AEARKKSKVL VPIRRYEYSL GHETDSSYGG MSSRIDLGPD NMTRTNRRGR PHGDLSLKPV AKISTDAIDS NGNDMVSLAP LQLEARSAFH
501: PSRAASSANV DGSSPDSSLD SPDLHLYRFS GVSSSAAEDL QLVALTAPGS TPHHGIQLSR STSDGYEASG GEDSDRIPSR IVHRSSNWAS IILSTDQGVP
601: SSGALVPKNR LP

Best Arabidopsis Sequence Match ( AT1G69420.2 )
(BLAST)

001: MRKHGWQLPY HPLQVVAVAV FLALGFAFYV FFAPFVGKKI HQYIAMGIYT PLITCVVGLY IWCAASDPAD RGVFRSKKYL KIPENGKFPL AKDIKDGCGS
101: ATGGAKSHDG TCVEDTENGS NKKLESSERS SLLRLLCSPC ALLCSCCSGK DESSEQMSED GMFYCSLCEV EVFKYSKHCR VCDKCVDRFD HHCRWLNNCI
201: GKRNYRKFFS LMVSAIFLLI MQWSTGIFVL VLCLLRRNQF NADIALKLGS SFSLIPFVIV VGVCTVLAML ATLPLAQLFF FHILLIKKGI STYDYIVALR
301: EQEQELEAGG GQQSPQMSMI SSFTGLSSAS SFNTFHRGAW CTPPRLFLED QFDVVPPENA SVSSYGKKSV VEERVKKKPQ PVKISPWTLA RLNAEEVSKA
401: AAEARKKSKI IQPVARRENP FVGLEASSSF GSSGRRMFPT KYEGVNNNGK QRRQSKRIRL PAELPLEPLM NVQTKAAMET STSSGLAPLQ LEARSAFQTS
501: RAMSGSGNVM VTSSPESSLD SHDIHPFRVS SEAEDAAQLN GFSSAVGLMG QQRGQQQQQQ LSMMMMPLSR STSDGYDASG GEDSDQVPSR NIHKSR

Arabidopsis Description

PAT22S-acyltransferase [Source:UniProtKB/TrEMBL;Acc:A0A178WF77]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.