Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 3
- endoplasmic reticulum 4
- vacuole 3
- plasma membrane 5
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY40920 | Canola | plasma membrane | 82.21 | 84.92 |
| Bra038305.1-P | Field mustard | plasma membrane | 80.03 | 80.98 |
| CDX95936 | Canola | plasma membrane | 74.5 | 80.43 |
| Bra004380.1-P | Field mustard | endoplasmic reticulum, plasma membrane, vacuole | 80.2 | 80.07 |
| CDY51503 | Canola | plasma membrane | 78.36 | 79.56 |
| CDY28549 | Canola | plasma membrane | 73.66 | 76.88 |
| CDY44067 | Canola | plasma membrane | 73.15 | 76.63 |
| GSMUA_Achr4P10850_001 | Banana | extracellular | 4.19 | 75.76 |
| Bra004000.1-P | Field mustard | cytosol, nucleus, plasma membrane | 64.93 | 70.36 |
| CDY07350 | Canola | plasma membrane | 65.94 | 68.35 |
| GSMUA_Achr10P... | Banana | plasma membrane | 42.95 | 60.81 |
| GSMUA_Achr5P16110_001 | Banana | plasma membrane | 28.02 | 60.29 |
| VIT_01s0113g00420.t01 | Wine grape | endoplasmic reticulum, golgi, plasma membrane | 63.42 | 59.81 |
| KRH74943 | Soybean | plasma membrane | 62.08 | 59.39 |
| PGSC0003DMT400072839 | Potato | plasma membrane | 61.74 | 58.41 |
| KRH70813 | Soybean | plasma membrane | 61.24 | 58.4 |
| Solyc05g012790.2.1 | Tomato | plasma membrane | 60.74 | 57.46 |
| KRG89539 | Soybean | endoplasmic reticulum, golgi, plasma membrane | 57.72 | 55.31 |
| KRH50551 | Soybean | plasma membrane | 56.71 | 54.25 |
| HORVU3Hr1G033580.1 | Barley | plasma membrane | 14.6 | 54.04 |
| GSMUA_Achr6P07830_001 | Banana | endoplasmic reticulum, golgi, plasma membrane | 54.87 | 52.4 |
| Os03t0209500-01 | Rice | endoplasmic reticulum, golgi, plasma membrane | 52.52 | 52.34 |
| TraesCS4B01G252500.1 | Wheat | plasma membrane | 51.01 | 51.97 |
| Os07t0596000-01 | Rice | plasma membrane | 21.48 | 51.61 |
| TraesCS4A01G051700.1 | Wheat | plasma membrane | 50.5 | 51.37 |
| TraesCS4D01G252800.1 | Wheat | plasma membrane | 50.34 | 51.19 |
| TraesCS2B01G209800.1 | Wheat | golgi | 52.35 | 50.98 |
| HORVU2Hr1G034630.4 | Barley | plasma membrane | 52.01 | 50.65 |
| Os10t0337500-01 | Rice | plasma membrane | 50.34 | 50.34 |
| TraesCS2A01G183200.1 | Wheat | plasma membrane | 51.51 | 50.16 |
| TraesCS2D01G191000.1 | Wheat | plasma membrane | 51.17 | 49.92 |
| HORVU4Hr1G060520.1 | Barley | endoplasmic reticulum, plasma membrane, vacuole | 15.44 | 48.68 |
| EER99646 | Sorghum | plasma membrane | 50.17 | 48.46 |
| KXG39903 | Sorghum | plasma membrane | 48.83 | 48.1 |
| Zm00001d030508_P001 | Maize | plasma membrane | 45.47 | 46.4 |
| Zm00001d006757_P003 | Maize | plasma membrane | 51.17 | 45.52 |
| Zm00001d022038_P007 | Maize | plasma membrane | 52.18 | 45.07 |
| HORVU4Hr1G069190.5 | Barley | cytosol, peroxisome | 50.67 | 42.66 |
| Zm00001d028039_P004 | Maize | plasma membrane, plastid | 50.34 | 39.27 |
| GSMUA_Achr5P16100_001 | Banana | endoplasmic reticulum, extracellular, plasma membrane | 16.78 | 34.84 |
| GSMUA_Achr4P10840_001 | Banana | extracellular, mitochondrion, plasma membrane, plastid | 13.93 | 34.73 |
| AT2G33640.1 | Thale cress | plasma membrane | 28.86 | 30.44 |
| AT4G15080.2 | Thale cress | golgi | 31.88 | 26.46 |
| AT3G22180.1 | Thale cress | plasma membrane | 30.7 | 25.92 |
| AT4G01730.1 | Thale cress | plasma membrane | 21.14 | 24.8 |
Protein Annotations
| MapMan:35.1 | EntrezGene:843274 | UniProt:A0A178WF77 | ProteinID:AAG52492.1 | ProteinID:AAG60091.1 | ProteinID:AEE34922.1 |
| ProteinID:AEE34923.1 | ArrayExpress:AT1G69420 | EnsemblPlantsGene:AT1G69420 | RefSeq:AT1G69420 | TAIR:AT1G69420 | RefSeq:AT1G69420-TAIR-G |
| EnsemblPlants:AT1G69420.1 | TAIR:AT1G69420.1 | EMBL:BX814193 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005886 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0016740 | GO:GO:0016746 | GO:GO:0019706 | GO:GO:0030659 | GO:GO:0031410 | RefSeq:NP_177101.2 |
| RefSeq:NP_974114.1 | ProteinID:OAP16145.1 | PFAM:PF01529 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PFscan:PS50216 | PANTHER:PTHR22883 | PANTHER:PTHR22883:SF119 |
| InterPro:Palmitoyltrfase_DHHC | UniProt:Q9C533 | TMHMM:TMhelix | UniParc:UPI000034F516 | SEG:seg | : |
Description
PAT22S-acyltransferase [Source:UniProtKB/TrEMBL;Acc:A0A178WF77]
Coordinates
chr1:+:26093026..26097167
Molecular Weight (calculated)
65893.4 Da
IEP (calculated)
8.860
GRAVY (calculated)
-0.177
Length
596 amino acids
Sequence
(BLAST)
(BLAST)
001: MRKHGWQLPY HPLQVVAVAV FLALGFAFYV FFAPFVGKKI HQYIAMGIYT PLITCVVGLY IWCAASDPAD RGVFRSKKYL KIPENGKFPL AKDIKDGCGS
101: ATGGAKSHDG TCVEDTENGS NKKLESSERS SLLRLLCSPC ALLCSCCSGK DESSEQMSED GMFYCSLCEV EVFKYSKHCR VCDKCVDRFD HHCRWLNNCI
201: GKRNYRKFFS LMVSAIFLLI MQWSTGIFVL VLCLLRRNQF NADIALKLGS SFSLIPFVIV VGVCTVLAML ATLPLAQLFF FHILLIKKGI STYDYIVALR
301: EQEQELEAGG GQQSPQMSMI SSFTGLSSAS SFNTFHRGAW CTPPRLFLED QFDVVPPENA SVSSYGKKSV VEERVKKKPQ PVKISPWTLA RLNAEEVSKA
401: AAEARKKSKI IQPVARRENP FVGLEASSSF GSSGRRMFPT KYEGVNNNGK QRRQSKRIRL PAELPLEPLM NVQTKAAMET STSSGLAPLQ LEARSAFQTS
501: RAMSGSGNVM VTSSPESSLD SHDIHPFRVS SEAEDAAQLN GFSSAVGLMG QQRGQQQQQQ LSMMMMPLSR STSDGYDASG GEDSDQVPSR NIHKSR
101: ATGGAKSHDG TCVEDTENGS NKKLESSERS SLLRLLCSPC ALLCSCCSGK DESSEQMSED GMFYCSLCEV EVFKYSKHCR VCDKCVDRFD HHCRWLNNCI
201: GKRNYRKFFS LMVSAIFLLI MQWSTGIFVL VLCLLRRNQF NADIALKLGS SFSLIPFVIV VGVCTVLAML ATLPLAQLFF FHILLIKKGI STYDYIVALR
301: EQEQELEAGG GQQSPQMSMI SSFTGLSSAS SFNTFHRGAW CTPPRLFLED QFDVVPPENA SVSSYGKKSV VEERVKKKPQ PVKISPWTLA RLNAEEVSKA
401: AAEARKKSKI IQPVARRENP FVGLEASSSF GSSGRRMFPT KYEGVNNNGK QRRQSKRIRL PAELPLEPLM NVQTKAAMET STSSGLAPLQ LEARSAFQTS
501: RAMSGSGNVM VTSSPESSLD SHDIHPFRVS SEAEDAAQLN GFSSAVGLMG QQRGQQQQQQ LSMMMMPLSR STSDGYDASG GEDSDQVPSR NIHKSR
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.