Subcellular Localization
min:
: max
Winner_takes_all: golgi
Predictor Summary:
Predictor Summary:
- nucleus 2
- extracellular 3
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 4
- golgi 5
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY47797 | Canola | plasma membrane | 72.01 | 79.78 |
| Bra039566.1-P | Field mustard | endoplasmic reticulum, golgi, plasma membrane | 73.54 | 63.92 |
| CDY22939 | Canola | golgi | 65.6 | 63.31 |
| AT3G22180.1 | Thale cress | plasma membrane | 60.17 | 61.19 |
| VIT_03s0017g01770.t01 | Wine grape | plasma membrane | 60.03 | 58.4 |
| Solyc05g016030.2.1 | Tomato | endoplasmic reticulum, golgi, plasma membrane | 57.52 | 57.36 |
| GSMUA_Achr8P33480_001 | Banana | endoplasmic reticulum, golgi, plasma membrane | 44.71 | 56.12 |
| GSMUA_Achr11P... | Banana | golgi | 45.13 | 55.96 |
| GSMUA_Achr7P03550_001 | Banana | golgi | 42.9 | 54.71 |
| KRH29083 | Soybean | plasma membrane | 55.43 | 54.08 |
| KRH24108 | Soybean | plasma membrane | 55.43 | 53.86 |
| TraesCS5B01G368600.1 | Wheat | plasma membrane | 47.49 | 49.49 |
| TraesCS5A01G366200.1 | Wheat | plasma membrane | 47.21 | 49.2 |
| TraesCS7A01G277000.1 | Wheat | golgi | 44.43 | 48.93 |
| Os09t0563250-01 | Rice | plasma membrane | 47.49 | 48.71 |
| KXG35088 | Sorghum | golgi | 48.05 | 48.66 |
| TraesCS5D01G375800.1 | Wheat | plasma membrane | 46.66 | 48.62 |
| HORVU5Hr1G090020.3 | Barley | endoplasmic reticulum, plasma membrane | 47.08 | 48.08 |
| TraesCS7D01G277000.2 | Wheat | golgi | 43.18 | 47.4 |
| TraesCS7B01G174700.1 | Wheat | golgi | 43.04 | 47.39 |
| Zm00001d031977_P001 | Maize | golgi | 44.01 | 46.33 |
| AT2G33640.1 | Thale cress | plasma membrane | 36.21 | 46.02 |
| KXG25411 | Sorghum | golgi | 44.71 | 45.86 |
| HORVU7Hr1G058360.1 | Barley | nucleus, peroxisome | 43.04 | 43.52 |
| Zm00001d019637_P001 | Maize | plasma membrane | 46.8 | 42.69 |
| AT1G69420.1 | Thale cress | plasma membrane | 26.46 | 31.88 |
| AT4G01730.1 | Thale cress | plasma membrane | 19.22 | 27.17 |
Protein Annotations
| MapMan:35.1 | EntrezGene:827172 | ProteinID:AEE83552.1 | ProteinID:ANM66481.1 | ArrayExpress:AT4G15080 | EnsemblPlantsGene:AT4G15080 |
| RefSeq:AT4G15080 | TAIR:AT4G15080 | RefSeq:AT4G15080-TAIR-G | EnsemblPlants:AT4G15080.2 | EMBL:AY099860 | Unigene:At.33215 |
| EMBL:BT008794 | ProteinID:CAB10287.1 | ProteinID:CAB78550.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 |
| GO:GO:0005623 | GO:GO:0005886 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016740 | GO:GO:0016746 |
| GO:GO:0019706 | RefSeq:NP_001328372.1 | RefSeq:NP_193244.2 | PFAM:PF01529 | PFscan:PS50216 | PANTHER:PTHR22883 |
| PANTHER:PTHR22883:SF15 | InterPro:Palmitoyltrfase_DHHC | UniProt:Q8L5Y5 | TMHMM:TMhelix | UniParc:UPI00000A0816 | SEG:seg |
Description
PAT19Probable protein S-acyltransferase 19 [Source:UniProtKB/Swiss-Prot;Acc:Q8L5Y5]
Coordinates
chr4:-:8608658..8612693
Molecular Weight (calculated)
78742.6 Da
IEP (calculated)
8.562
GRAVY (calculated)
-0.315
Length
718 amino acids
Sequence
(BLAST)
(BLAST)
001: MVRKHGWQLP AHKFQVVAIT VFCLLSVAYY AFFAPFVGGR IWEYILLGVY SPVALIVFVL YVRCTAINPA DPGIMSKFER GASRGGDLPT AKDISRKFDE
101: TGSHLQSSPS VASRTSTLPN SSVKGSVGDA QRVEAAKRKS CFNPLAICCG VFVYEDCRSK EETDEQQGDR EEALFCTLCN AEVRKFSKHC RSCDKCVDCF
201: DHHCRWLNNC VGRKNYMTFI SLMAVSLLWL LIEAGVGIAV IVRVFVNKKD METEIVNRLG NGFSRAPFAT VVGLCTAVSM LALFPLGELF FFHMLLIKKG
301: ITTYEYVVAM RAMSEAPAGA SIDEEIPNVL YSPSGSATTG FSGGSSLGLP YKGAWCTPPR VFVDYQDEVI PHLDPRMVPS TVDPDAAETA ERGNKIPKRP
401: VKISAWKLAK LNSNEATRAA ARARASSSVL RPIENRHLHD DELSSRSGTI SVVSSVSTEA NGATLSREIR NNDPMLSHCR NSYAPSQGSR DEYDTGTHSM
501: SSLSSPSHVH ETVTLSPLPQ HHTAGHRFTA AAASNSSRPP LNQATNHMIH STFDEKIMQK GNHADPLLLP APAASLLRDV RRTSVVWDQE AGRYISVPAT
601: TSEPRTRFSS QNQPIPSSHM GNTQNPRPVG HPPQDSSSGR APPPTQQQQG ERLMYTGESI FFGGPLVNIP NRDGLRHDGD SGREGQDRMT LTLPREARFK
701: RDTTSNQLPV FAPVGTRK
101: TGSHLQSSPS VASRTSTLPN SSVKGSVGDA QRVEAAKRKS CFNPLAICCG VFVYEDCRSK EETDEQQGDR EEALFCTLCN AEVRKFSKHC RSCDKCVDCF
201: DHHCRWLNNC VGRKNYMTFI SLMAVSLLWL LIEAGVGIAV IVRVFVNKKD METEIVNRLG NGFSRAPFAT VVGLCTAVSM LALFPLGELF FFHMLLIKKG
301: ITTYEYVVAM RAMSEAPAGA SIDEEIPNVL YSPSGSATTG FSGGSSLGLP YKGAWCTPPR VFVDYQDEVI PHLDPRMVPS TVDPDAAETA ERGNKIPKRP
401: VKISAWKLAK LNSNEATRAA ARARASSSVL RPIENRHLHD DELSSRSGTI SVVSSVSTEA NGATLSREIR NNDPMLSHCR NSYAPSQGSR DEYDTGTHSM
501: SSLSSPSHVH ETVTLSPLPQ HHTAGHRFTA AAASNSSRPP LNQATNHMIH STFDEKIMQK GNHADPLLLP APAASLLRDV RRTSVVWDQE AGRYISVPAT
601: TSEPRTRFSS QNQPIPSSHM GNTQNPRPVG HPPQDSSSGR APPPTQQQQG ERLMYTGESI FFGGPLVNIP NRDGLRHDGD SGREGQDRMT LTLPREARFK
701: RDTTSNQLPV FAPVGTRK
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.