Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 3
- endoplasmic reticulum 3
- vacuole 4
- plasma membrane 5
- golgi 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY23719 | Canola | plasma membrane | 72.57 | 74.68 |
| Bra021866.1-P | Field mustard | plasma membrane | 72.39 | 73.04 |
| CDY37703 | Canola | plasma membrane | 59.47 | 69.14 |
| GSMUA_Achr11P... | Banana | plasma membrane | 50.27 | 48.3 |
| PGSC0003DMT400025680 | Potato | plasma membrane | 54.34 | 47.52 |
| Solyc04g082650.2.1 | Tomato | plasma membrane | 54.16 | 47.37 |
| TraesCS2A01G455300.1 | Wheat | golgi | 51.15 | 47.07 |
| TraesCS2D01G455700.1 | Wheat | golgi | 51.15 | 47.07 |
| HORVU2Hr1G104880.6 | Barley | golgi | 51.15 | 46.99 |
| VIT_18s0122g00920.t01 | Wine grape | plasma membrane | 54.51 | 46.88 |
| KRH60890 | Soybean | plasma membrane | 53.1 | 46.73 |
| TraesCS2B01G477400.1 | Wheat | golgi | 50.62 | 46.58 |
| Os04t0585100-01 | Rice | golgi | 50.62 | 46.43 |
| KRH51572 | Soybean | plasma membrane | 52.74 | 46.13 |
| EES12729 | Sorghum | golgi | 49.73 | 45.69 |
| AT4G15080.2 | Thale cress | golgi | 46.02 | 36.21 |
| AT3G22180.1 | Thale cress | plasma membrane | 43.54 | 34.84 |
| Zm00001d002534_P001 | Maize | cytosol | 49.03 | 33.62 |
| AT1G69420.1 | Thale cress | plasma membrane | 30.44 | 28.86 |
| AT4G01730.1 | Thale cress | plasma membrane | 22.12 | 24.61 |
Protein Annotations
| MapMan:35.1 | EntrezGene:817930 | UniProt:A0A178VPS5 | ProteinID:AAB80679.1 | ProteinID:AEC08865.1 | ArrayExpress:AT2G33640 |
| EnsemblPlantsGene:AT2G33640 | RefSeq:AT2G33640 | TAIR:AT2G33640 | RefSeq:AT2G33640-TAIR-G | EnsemblPlants:AT2G33640.1 | TAIR:AT2G33640.1 |
| EMBL:AY102547 | EMBL:AY649312 | Unigene:At.37901 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 |
| GO:GO:0005623 | GO:GO:0005886 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016740 | GO:GO:0016746 |
| GO:GO:0019706 | RefSeq:NP_180922.2 | ProteinID:OAP08480.1 | PFAM:PF01529 | PO:PO:0000037 | PO:PO:0000293 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0004507 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009005 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009031 | PO:PO:0009046 | PO:PO:0009052 | PO:PO:0025022 |
| PO:PO:0025281 | PFscan:PS50216 | PANTHER:PTHR22883 | PANTHER:PTHR22883:SF15 | InterPro:Palmitoyltrfase_DHHC | UniProt:Q6DR03 |
| TMHMM:TMhelix | UniParc:UPI0000196D77 | SEG:seg | : | : | : |
Description
PAT21Protein S-acyltransferase 21 [Source:UniProtKB/Swiss-Prot;Acc:Q6DR03]
Coordinates
chr2:+:14239180..14242420
Molecular Weight (calculated)
62141.9 Da
IEP (calculated)
8.147
GRAVY (calculated)
-0.172
Length
565 amino acids
Sequence
(BLAST)
(BLAST)
001: MARRHGWQLP AHTFQVVAIT VFFLLTVAYY AFFAPFLGNK LYEYIAIGVY SFLAFSVLVL YIRCTGIDPA DPGIFVKADN TPAHKSQNSN YVPENASAID
101: GGPYIRHGSG CCSAIGRFIC GCLVIQDCRR DTQQEQSNEQ EEALFCSLCN AEVRMFSKHC RSCGKCVDGF DHHCRWLNNC VGQKNYISFV CLMAASFFWL
201: IAEFGVGVTV FVRCFVDQKA MEHLITEKLG LGFSRPPFAA VVVVCTTLSL LALIPLGELF FFHMILIRKG ITTYEYVVAL RAQTEPLGTS VDELDQTSQY
301: PSPASSAVTA TSARSSLGLS IQYRGASLCT PPNIFVDQQD DVIQHLEPGP VRSTIDPDSL SQKKPPQRQQ VRINPWKLAK LDSKEASKAA AKARASSSVL
401: LPVSSRQNPY KTSSNVSGRS SPGRGKPADS ESCSLSSPGL TRDHFNPMYM SSPANESPLN EEESRNAVVA ARRNLPSSDE SSVVWDPEAG RFVSLSRIPG
501: TDVGGPLGNE CLNTITSTGT DRSRRARGNP LTGYFQQVRS QRGDQLPVFM PTDSQLHRHL STRFH
101: GGPYIRHGSG CCSAIGRFIC GCLVIQDCRR DTQQEQSNEQ EEALFCSLCN AEVRMFSKHC RSCGKCVDGF DHHCRWLNNC VGQKNYISFV CLMAASFFWL
201: IAEFGVGVTV FVRCFVDQKA MEHLITEKLG LGFSRPPFAA VVVVCTTLSL LALIPLGELF FFHMILIRKG ITTYEYVVAL RAQTEPLGTS VDELDQTSQY
301: PSPASSAVTA TSARSSLGLS IQYRGASLCT PPNIFVDQQD DVIQHLEPGP VRSTIDPDSL SQKKPPQRQQ VRINPWKLAK LDSKEASKAA AKARASSSVL
401: LPVSSRQNPY KTSSNVSGRS SPGRGKPADS ESCSLSSPGL TRDHFNPMYM SSPANESPLN EEESRNAVVA ARRNLPSSDE SSVVWDPEAG RFVSLSRIPG
501: TDVGGPLGNE CLNTITSTGT DRSRRARGNP LTGYFQQVRS QRGDQLPVFM PTDSQLHRHL STRFH
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.