Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 2
- extracellular 3
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 6
- golgi 3
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc04g082650.2.1 | Tomato | plasma membrane | 95.67 | 95.67 |
| VIT_18s0122g00920.t01 | Wine grape | plasma membrane | 68.89 | 67.73 |
| KRH60890 | Soybean | plasma membrane | 60.06 | 60.44 |
| KRH51572 | Soybean | plasma membrane | 58.51 | 58.51 |
| GSMUA_Achr11P... | Banana | plasma membrane | 52.79 | 57.99 |
| EES12729 | Sorghum | golgi | 53.41 | 56.1 |
| TraesCS2A01G455300.1 | Wheat | golgi | 53.1 | 55.86 |
| Os04t0585100-01 | Rice | golgi | 53.25 | 55.84 |
| HORVU2Hr1G104880.6 | Barley | golgi | 53.1 | 55.77 |
| TraesCS2D01G455700.1 | Wheat | golgi | 52.63 | 55.37 |
| CDY23719 | Canola | plasma membrane | 47.06 | 55.37 |
| CDY37703 | Canola | plasma membrane | 41.49 | 55.14 |
| TraesCS2B01G477400.1 | Wheat | golgi | 52.17 | 54.89 |
| Bra021866.1-P | Field mustard | plasma membrane | 47.52 | 54.82 |
| AT2G33640.1 | Thale cress | plasma membrane | 47.52 | 54.34 |
| Zm00001d002534_P001 | Maize | cytosol | 52.79 | 41.38 |
| PGSC0003DMT400072839 | Potato | plasma membrane | 28.79 | 29.52 |
| PGSC0003DMT400002869 | Potato | endoplasmic reticulum, golgi, plasma membrane | 22.45 | 27.83 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400025680 | EnsemblPlantsGene:PGSC0003DMG400009915 | EntrezGene:102606379 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016740 | GO:GO:0016746 | GO:GO:0019706 | InterPro:Palmitoyltrfase_DHHC |
| PANTHER:PTHR22883 | PANTHER:PTHR22883:SF15 | PFAM:PF01529 | PFscan:PS50216 | PGSC:PGSC0003DMG400009915 | RefSeq:XP_006342160.1 |
| SEG:seg | TMHMM:TMhelix | UniParc:UPI000295072A | UniProt:M1ALU7 | MapMan:35.1 | : |
Description
Zinc finger protein [Source:PGSC_GENE;Acc:PGSC0003DMG400009915]
Coordinates
chr4:+:71835918..71842242
Molecular Weight (calculated)
70038.5 Da
IEP (calculated)
7.554
GRAVY (calculated)
-0.269
Length
646 amino acids
Sequence
(BLAST)
(BLAST)
001: MARRHGWQLP AHSFQVVAIT VFCLLSVAFY AFFAPFLGKD IFEYIAIGVY SFLALCVFTL YVRCTAIDPA DPGILIEADK STAYQSHNEI ELPGDISAAG
101: GPSKEGFRDG GTTTSDASGC CGRLGGILCC CFVIEDCRKD DQSLEQSGDE EVLFCTLCNA EVRKFSKHCR SCDKCVDGFD HHCRWLNNCV GRKNYITFVC
201: LMAFSFVWLV FECGVGIAVL VRCFVDKKAT ENQIIERLGE GFSRPPFAIV VALCTAVSLL ATVPLGELFF FHIILIRKGI TTYEYVVAMR SQSEPPGPSV
301: DGGDQQSLPS SPTSSAVTAI SGRSSVGMSL QHKGAWCTPP RIFMDHQDEI IPHLQPGRLP STVDPDALDK DKKASHRPVR ISAWKLAKLD SSEAIKAGAK
401: ARASSSVLRP VGAKHNPYDA DHLSSGMSGI SSPASTNQGF YDSNARAGTL RLSPSKSSYP PSRASREDIE TCGHSMSNLS SPLAPNRAPS PLALQHHPSN
501: RDHFNPIYQS SANQSPWSAK ACHENESPPP DNLSEASTRK NNMGTPESTR SSVFWDQEAG RFVTANTNRG AGSTSQVSGT ELTYTGQSIF FGGPLLNENM
601: NRGARSSGTP FAGGPQRSYY QGRTQRGGQL PVFVPSDSQQ NQFSSR
101: GPSKEGFRDG GTTTSDASGC CGRLGGILCC CFVIEDCRKD DQSLEQSGDE EVLFCTLCNA EVRKFSKHCR SCDKCVDGFD HHCRWLNNCV GRKNYITFVC
201: LMAFSFVWLV FECGVGIAVL VRCFVDKKAT ENQIIERLGE GFSRPPFAIV VALCTAVSLL ATVPLGELFF FHIILIRKGI TTYEYVVAMR SQSEPPGPSV
301: DGGDQQSLPS SPTSSAVTAI SGRSSVGMSL QHKGAWCTPP RIFMDHQDEI IPHLQPGRLP STVDPDALDK DKKASHRPVR ISAWKLAKLD SSEAIKAGAK
401: ARASSSVLRP VGAKHNPYDA DHLSSGMSGI SSPASTNQGF YDSNARAGTL RLSPSKSSYP PSRASREDIE TCGHSMSNLS SPLAPNRAPS PLALQHHPSN
501: RDHFNPIYQS SANQSPWSAK ACHENESPPP DNLSEASTRK NNMGTPESTR SSVFWDQEAG RFVTANTNRG AGSTSQVSGT ELTYTGQSIF FGGPLLNENM
601: NRGARSSGTP FAGGPQRSYY QGRTQRGGQL PVFVPSDSQQ NQFSSR
001: MARRHGWQLP AHTFQVVAIT VFFLLTVAYY AFFAPFLGNK LYEYIAIGVY SFLAFSVLVL YIRCTGIDPA DPGIFVKADN TPAHKSQNSN YVPENASAID
101: GGPYIRHGSG CCSAIGRFIC GCLVIQDCRR DTQQEQSNEQ EEALFCSLCN AEVRMFSKHC RSCGKCVDGF DHHCRWLNNC VGQKNYISFV CLMAASFFWL
201: IAEFGVGVTV FVRCFVDQKA MEHLITEKLG LGFSRPPFAA VVVVCTTLSL LALIPLGELF FFHMILIRKG ITTYEYVVAL RAQTEPLGTS VDELDQTSQY
301: PSPASSAVTA TSARSSLGLS IQYRGASLCT PPNIFVDQQD DVIQHLEPGP VRSTIDPDSL SQKKPPQRQQ VRINPWKLAK LDSKEASKAA AKARASSSVL
401: LPVSSRQNPY KTSSNVSGRS SPGRGKPADS ESCSLSSPGL TRDHFNPMYM SSPANESPLN EEESRNAVVA ARRNLPSSDE SSVVWDPEAG RFVSLSRIPG
501: TDVGGPLGNE CLNTITSTGT DRSRRARGNP LTGYFQQVRS QRGDQLPVFM PTDSQLHRHL STRFH
101: GGPYIRHGSG CCSAIGRFIC GCLVIQDCRR DTQQEQSNEQ EEALFCSLCN AEVRMFSKHC RSCGKCVDGF DHHCRWLNNC VGQKNYISFV CLMAASFFWL
201: IAEFGVGVTV FVRCFVDQKA MEHLITEKLG LGFSRPPFAA VVVVCTTLSL LALIPLGELF FFHMILIRKG ITTYEYVVAL RAQTEPLGTS VDELDQTSQY
301: PSPASSAVTA TSARSSLGLS IQYRGASLCT PPNIFVDQQD DVIQHLEPGP VRSTIDPDSL SQKKPPQRQQ VRINPWKLAK LDSKEASKAA AKARASSSVL
401: LPVSSRQNPY KTSSNVSGRS SPGRGKPADS ESCSLSSPGL TRDHFNPMYM SSPANESPLN EEESRNAVVA ARRNLPSSDE SSVVWDPEAG RFVSLSRIPG
501: TDVGGPLGNE CLNTITSTGT DRSRRARGNP LTGYFQQVRS QRGDQLPVFM PTDSQLHRHL STRFH
Arabidopsis Description
PAT21Protein S-acyltransferase 21 [Source:UniProtKB/Swiss-Prot;Acc:Q6DR03]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.