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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 2
  • extracellular 4
  • endoplasmic reticulum 5
  • vacuole 4
  • plasma membrane 6
  • golgi 4
  • plastid 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc05g012790.2.1 Tomato plasma membrane 83.17 83.17
GSMUA_Achr4P10850_001 Banana extracellular 3.97 75.76
VIT_01s0113g00420.t01 Wine grape endoplasmic reticulum, golgi, plasma membrane 67.94 67.72
KRH74943 Soybean plasma membrane 64.76 65.49
KRH70813 Soybean plasma membrane 64.44 64.96
CDX95936 Canola plasma membrane 56.19 64.13
GSMUA_Achr5P16110_001 Banana plasma membrane 28.1 63.9
GSMUA_Achr10P... Banana plasma membrane 42.38 63.42
CDY40920 Canola plasma membrane 57.94 63.26
KRG89539 Soybean endoplasmic reticulum, golgi, plasma membrane 61.9 62.7
AT1G69420.1 Thale cress plasma membrane 58.41 61.74
Bra004380.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 58.41 61.64
CDY28549 Canola plasma membrane 54.6 60.25
CDY44067 Canola plasma membrane 53.97 59.75
Bra038305.1-P Field mustard plasma membrane 55.56 59.42
CDY51503 Canola plasma membrane 54.76 58.77
KRH50551 Soybean plasma membrane 57.62 58.27
HORVU3Hr1G033580.1 Barley plasma membrane 14.6 57.14
GSMUA_Achr6P07830_001 Banana endoplasmic reticulum, golgi, plasma membrane 54.92 55.45
CDY07350 Canola plasma membrane 50.48 55.3
TraesCS2B01G209800.1 Wheat golgi 52.86 54.41
HORVU2Hr1G034630.4 Barley plasma membrane 52.86 54.41
Bra004000.1-P Field mustard cytosol, nucleus, plasma membrane 46.83 53.64
TraesCS2D01G191000.1 Wheat plasma membrane 51.43 53.03
TraesCS2A01G183200.1 Wheat plasma membrane 51.43 52.94
EER99646 Sorghum plasma membrane 50.95 52.03
TraesCS4B01G252500.1 Wheat plasma membrane 48.25 51.97
Os07t0596000-01 Rice plasma membrane 20.32 51.61
TraesCS4D01G252800.1 Wheat plasma membrane 47.62 51.19
TraesCS4A01G051700.1 Wheat plasma membrane 47.3 50.85
Os03t0209500-01 Rice endoplasmic reticulum, golgi, plasma membrane 48.25 50.84
HORVU4Hr1G060520.1 Barley endoplasmic reticulum, plasma membrane, vacuole 15.24 50.79
Zm00001d006757_P003 Maize plasma membrane 52.86 49.7
Zm00001d030508_P001 Maize plasma membrane 45.56 49.14
KXG39903 Sorghum plasma membrane 47.14 49.09
Os10t0337500-01 Rice plasma membrane 46.35 48.99
Zm00001d022038_P007 Maize plasma membrane 53.02 48.41
HORVU4Hr1G069190.5 Barley cytosol, peroxisome 48.41 43.08
CDX84493 Canola cytosol 8.73 39.86
Zm00001d028039_P004 Maize plasma membrane, plastid 48.25 39.79
GSMUA_Achr4P10840_001 Banana extracellular, mitochondrion, plasma membrane, plastid 14.44 38.08
GSMUA_Achr5P16100_001 Banana endoplasmic reticulum, extracellular, plasma membrane 16.83 36.93
PGSC0003DMT400025680 Potato plasma membrane 29.52 28.79
PGSC0003DMT400002869 Potato endoplasmic reticulum, golgi, plasma membrane 20.63 24.95
Protein Annotations
EnsemblPlants:PGSC0003DMT400072839EnsemblPlantsGene:PGSC0003DMG400028336EntrezGene:102581866GO:GO:0003674GO:GO:0003824GO:GO:0005575
GO:GO:0016020GO:GO:0016021GO:GO:0016740GO:GO:0016746GO:GO:0019706InterPro:Palmitoyltrfase_DHHC
PANTHER:PTHR22883PANTHER:PTHR22883:SF119PFAM:PF01529PFscan:PS50216PGSC:PGSC0003DMG400028336RefSeq:XP_006348734.1
SEG:segTMHMM:TMhelixUniParc:UPI000295BAC4UniProt:M1CR19MapMan:35.1:
Description
Zinc finger protein [Source:PGSC_GENE;Acc:PGSC0003DMG400028336]
Coordinates
chr5:-:165512..172874
Molecular Weight (calculated)
69614.7 Da
IEP (calculated)
9.563
GRAVY (calculated)
-0.196
Length
630 amino acids
Sequence
(BLAST)
001: MRKHGWQLPY HPLQVVAVAV FLALGFAFYV FFAPFVGKKL LQYIVMGLYT PLIISAFGLY IWCAAADPAD PGVFKSKKYL KKLDHKKQVQ LKESKLGCET
101: NSSIQDANAA SIGENASGKS NKGAEPAADH NETEQKITDT RHRSCSSGLL ALLPCAIISN CAGRHEESSQ QQLSEDGMFY CSLCEVEVFK YSKHCRVCDK
201: CVDQFDHHCR WINNCIGKRN YRKFFTLMVS ALLLLILQWS TGILVLICCF VEKKKFSAEI TSKLGSSFSI VPFVIVVAVC TILAMIATLP LAQLFFFHIL
301: LIKKGISTYD YIIALRDQEQ QGVAGQQSPQ MSTVSSLTGL SSASSFNTFH RAAWCTPPRL FVEDQYDVVP PDTVSVSSLG KRSTAEEPIK KKNPAAVKIS
401: PWTLARLNAE DVSKAAAEAR KKSKILQPVV RNKEPYILET NSSLGSSGRR MVPRVDNNRR RASKRVRLPA ELPFETMSKI PNDIAQNSRR PMITESSSSL
501: APLQLEARSD FRTTRGLSTS GVVVASSPES SLDSPDIHPL RVSSSGVEDA ARLVGHLSSG MTLQKDTPLS RSTSDGYEAS GGEDSDRVPT RIVQRSTRWS
601: SILFGSDQQD DRVRRLMVPS SSSQANIRKH
Best Arabidopsis Sequence Match ( AT1G69420.2 )
(BLAST)
001: MRKHGWQLPY HPLQVVAVAV FLALGFAFYV FFAPFVGKKI HQYIAMGIYT PLITCVVGLY IWCAASDPAD RGVFRSKKYL KIPENGKFPL AKDIKDGCGS
101: ATGGAKSHDG TCVEDTENGS NKKLESSERS SLLRLLCSPC ALLCSCCSGK DESSEQMSED GMFYCSLCEV EVFKYSKHCR VCDKCVDRFD HHCRWLNNCI
201: GKRNYRKFFS LMVSAIFLLI MQWSTGIFVL VLCLLRRNQF NADIALKLGS SFSLIPFVIV VGVCTVLAML ATLPLAQLFF FHILLIKKGI STYDYIVALR
301: EQEQELEAGG GQQSPQMSMI SSFTGLSSAS SFNTFHRGAW CTPPRLFLED QFDVVPPENA SVSSYGKKSV VEERVKKKPQ PVKISPWTLA RLNAEEVSKA
401: AAEARKKSKI IQPVARRENP FVGLEASSSF GSSGRRMFPT KYEGVNNNGK QRRQSKRIRL PAELPLEPLM NVQTKAAMET STSSGLAPLQ LEARSAFQTS
501: RAMSGSGNVM VTSSPESSLD SHDIHPFRVS SEAEDAAQLN GFSSAVGLMG QQRGQQQQQQ LSMMMMPLSR STSDGYDASG GEDSDQVPSR NIHKSR
Arabidopsis Description
PAT22S-acyltransferase [Source:UniProtKB/TrEMBL;Acc:A0A178WF77]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.