Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 2
- extracellular 4
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 6
- golgi 4
- plastid 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Solyc05g012790.2.1 | Tomato | plasma membrane | 83.17 | 83.17 |
GSMUA_Achr4P10850_001 | Banana | extracellular | 3.97 | 75.76 |
VIT_01s0113g00420.t01 | Wine grape | endoplasmic reticulum, golgi, plasma membrane | 67.94 | 67.72 |
KRH74943 | Soybean | plasma membrane | 64.76 | 65.49 |
KRH70813 | Soybean | plasma membrane | 64.44 | 64.96 |
CDX95936 | Canola | plasma membrane | 56.19 | 64.13 |
GSMUA_Achr5P16110_001 | Banana | plasma membrane | 28.1 | 63.9 |
GSMUA_Achr10P... | Banana | plasma membrane | 42.38 | 63.42 |
CDY40920 | Canola | plasma membrane | 57.94 | 63.26 |
KRG89539 | Soybean | endoplasmic reticulum, golgi, plasma membrane | 61.9 | 62.7 |
AT1G69420.1 | Thale cress | plasma membrane | 58.41 | 61.74 |
Bra004380.1-P | Field mustard | endoplasmic reticulum, plasma membrane, vacuole | 58.41 | 61.64 |
CDY28549 | Canola | plasma membrane | 54.6 | 60.25 |
CDY44067 | Canola | plasma membrane | 53.97 | 59.75 |
Bra038305.1-P | Field mustard | plasma membrane | 55.56 | 59.42 |
CDY51503 | Canola | plasma membrane | 54.76 | 58.77 |
KRH50551 | Soybean | plasma membrane | 57.62 | 58.27 |
HORVU3Hr1G033580.1 | Barley | plasma membrane | 14.6 | 57.14 |
GSMUA_Achr6P07830_001 | Banana | endoplasmic reticulum, golgi, plasma membrane | 54.92 | 55.45 |
CDY07350 | Canola | plasma membrane | 50.48 | 55.3 |
TraesCS2B01G209800.1 | Wheat | golgi | 52.86 | 54.41 |
HORVU2Hr1G034630.4 | Barley | plasma membrane | 52.86 | 54.41 |
Bra004000.1-P | Field mustard | cytosol, nucleus, plasma membrane | 46.83 | 53.64 |
TraesCS2D01G191000.1 | Wheat | plasma membrane | 51.43 | 53.03 |
TraesCS2A01G183200.1 | Wheat | plasma membrane | 51.43 | 52.94 |
EER99646 | Sorghum | plasma membrane | 50.95 | 52.03 |
TraesCS4B01G252500.1 | Wheat | plasma membrane | 48.25 | 51.97 |
Os07t0596000-01 | Rice | plasma membrane | 20.32 | 51.61 |
TraesCS4D01G252800.1 | Wheat | plasma membrane | 47.62 | 51.19 |
TraesCS4A01G051700.1 | Wheat | plasma membrane | 47.3 | 50.85 |
Os03t0209500-01 | Rice | endoplasmic reticulum, golgi, plasma membrane | 48.25 | 50.84 |
HORVU4Hr1G060520.1 | Barley | endoplasmic reticulum, plasma membrane, vacuole | 15.24 | 50.79 |
Zm00001d006757_P003 | Maize | plasma membrane | 52.86 | 49.7 |
Zm00001d030508_P001 | Maize | plasma membrane | 45.56 | 49.14 |
KXG39903 | Sorghum | plasma membrane | 47.14 | 49.09 |
Os10t0337500-01 | Rice | plasma membrane | 46.35 | 48.99 |
Zm00001d022038_P007 | Maize | plasma membrane | 53.02 | 48.41 |
HORVU4Hr1G069190.5 | Barley | cytosol, peroxisome | 48.41 | 43.08 |
CDX84493 | Canola | cytosol | 8.73 | 39.86 |
Zm00001d028039_P004 | Maize | plasma membrane, plastid | 48.25 | 39.79 |
GSMUA_Achr4P10840_001 | Banana | extracellular, mitochondrion, plasma membrane, plastid | 14.44 | 38.08 |
GSMUA_Achr5P16100_001 | Banana | endoplasmic reticulum, extracellular, plasma membrane | 16.83 | 36.93 |
PGSC0003DMT400025680 | Potato | plasma membrane | 29.52 | 28.79 |
PGSC0003DMT400002869 | Potato | endoplasmic reticulum, golgi, plasma membrane | 20.63 | 24.95 |
Protein Annotations
EnsemblPlants:PGSC0003DMT400072839 | EnsemblPlantsGene:PGSC0003DMG400028336 | EntrezGene:102581866 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 |
GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016740 | GO:GO:0016746 | GO:GO:0019706 | InterPro:Palmitoyltrfase_DHHC |
PANTHER:PTHR22883 | PANTHER:PTHR22883:SF119 | PFAM:PF01529 | PFscan:PS50216 | PGSC:PGSC0003DMG400028336 | RefSeq:XP_006348734.1 |
SEG:seg | TMHMM:TMhelix | UniParc:UPI000295BAC4 | UniProt:M1CR19 | MapMan:35.1 | : |
Description
Zinc finger protein [Source:PGSC_GENE;Acc:PGSC0003DMG400028336]
Coordinates
chr5:-:165512..172874
Molecular Weight (calculated)
69614.7 Da
IEP (calculated)
9.563
GRAVY (calculated)
-0.196
Length
630 amino acids
Sequence
(BLAST)
(BLAST)
001: MRKHGWQLPY HPLQVVAVAV FLALGFAFYV FFAPFVGKKL LQYIVMGLYT PLIISAFGLY IWCAAADPAD PGVFKSKKYL KKLDHKKQVQ LKESKLGCET
101: NSSIQDANAA SIGENASGKS NKGAEPAADH NETEQKITDT RHRSCSSGLL ALLPCAIISN CAGRHEESSQ QQLSEDGMFY CSLCEVEVFK YSKHCRVCDK
201: CVDQFDHHCR WINNCIGKRN YRKFFTLMVS ALLLLILQWS TGILVLICCF VEKKKFSAEI TSKLGSSFSI VPFVIVVAVC TILAMIATLP LAQLFFFHIL
301: LIKKGISTYD YIIALRDQEQ QGVAGQQSPQ MSTVSSLTGL SSASSFNTFH RAAWCTPPRL FVEDQYDVVP PDTVSVSSLG KRSTAEEPIK KKNPAAVKIS
401: PWTLARLNAE DVSKAAAEAR KKSKILQPVV RNKEPYILET NSSLGSSGRR MVPRVDNNRR RASKRVRLPA ELPFETMSKI PNDIAQNSRR PMITESSSSL
501: APLQLEARSD FRTTRGLSTS GVVVASSPES SLDSPDIHPL RVSSSGVEDA ARLVGHLSSG MTLQKDTPLS RSTSDGYEAS GGEDSDRVPT RIVQRSTRWS
601: SILFGSDQQD DRVRRLMVPS SSSQANIRKH
101: NSSIQDANAA SIGENASGKS NKGAEPAADH NETEQKITDT RHRSCSSGLL ALLPCAIISN CAGRHEESSQ QQLSEDGMFY CSLCEVEVFK YSKHCRVCDK
201: CVDQFDHHCR WINNCIGKRN YRKFFTLMVS ALLLLILQWS TGILVLICCF VEKKKFSAEI TSKLGSSFSI VPFVIVVAVC TILAMIATLP LAQLFFFHIL
301: LIKKGISTYD YIIALRDQEQ QGVAGQQSPQ MSTVSSLTGL SSASSFNTFH RAAWCTPPRL FVEDQYDVVP PDTVSVSSLG KRSTAEEPIK KKNPAAVKIS
401: PWTLARLNAE DVSKAAAEAR KKSKILQPVV RNKEPYILET NSSLGSSGRR MVPRVDNNRR RASKRVRLPA ELPFETMSKI PNDIAQNSRR PMITESSSSL
501: APLQLEARSD FRTTRGLSTS GVVVASSPES SLDSPDIHPL RVSSSGVEDA ARLVGHLSSG MTLQKDTPLS RSTSDGYEAS GGEDSDRVPT RIVQRSTRWS
601: SILFGSDQQD DRVRRLMVPS SSSQANIRKH
001: MRKHGWQLPY HPLQVVAVAV FLALGFAFYV FFAPFVGKKI HQYIAMGIYT PLITCVVGLY IWCAASDPAD RGVFRSKKYL KIPENGKFPL AKDIKDGCGS
101: ATGGAKSHDG TCVEDTENGS NKKLESSERS SLLRLLCSPC ALLCSCCSGK DESSEQMSED GMFYCSLCEV EVFKYSKHCR VCDKCVDRFD HHCRWLNNCI
201: GKRNYRKFFS LMVSAIFLLI MQWSTGIFVL VLCLLRRNQF NADIALKLGS SFSLIPFVIV VGVCTVLAML ATLPLAQLFF FHILLIKKGI STYDYIVALR
301: EQEQELEAGG GQQSPQMSMI SSFTGLSSAS SFNTFHRGAW CTPPRLFLED QFDVVPPENA SVSSYGKKSV VEERVKKKPQ PVKISPWTLA RLNAEEVSKA
401: AAEARKKSKI IQPVARRENP FVGLEASSSF GSSGRRMFPT KYEGVNNNGK QRRQSKRIRL PAELPLEPLM NVQTKAAMET STSSGLAPLQ LEARSAFQTS
501: RAMSGSGNVM VTSSPESSLD SHDIHPFRVS SEAEDAAQLN GFSSAVGLMG QQRGQQQQQQ LSMMMMPLSR STSDGYDASG GEDSDQVPSR NIHKSR
101: ATGGAKSHDG TCVEDTENGS NKKLESSERS SLLRLLCSPC ALLCSCCSGK DESSEQMSED GMFYCSLCEV EVFKYSKHCR VCDKCVDRFD HHCRWLNNCI
201: GKRNYRKFFS LMVSAIFLLI MQWSTGIFVL VLCLLRRNQF NADIALKLGS SFSLIPFVIV VGVCTVLAML ATLPLAQLFF FHILLIKKGI STYDYIVALR
301: EQEQELEAGG GQQSPQMSMI SSFTGLSSAS SFNTFHRGAW CTPPRLFLED QFDVVPPENA SVSSYGKKSV VEERVKKKPQ PVKISPWTLA RLNAEEVSKA
401: AAEARKKSKI IQPVARRENP FVGLEASSSF GSSGRRMFPT KYEGVNNNGK QRRQSKRIRL PAELPLEPLM NVQTKAAMET STSSGLAPLQ LEARSAFQTS
501: RAMSGSGNVM VTSSPESSLD SHDIHPFRVS SEAEDAAQLN GFSSAVGLMG QQRGQQQQQQ LSMMMMPLSR STSDGYDASG GEDSDQVPSR NIHKSR
Arabidopsis Description
PAT22S-acyltransferase [Source:UniProtKB/TrEMBL;Acc:A0A178WF77]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.