CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
extracellular 3
endoplasmic reticulum 4
vacuole 3
plasma membrane 5
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
EES01073
EES02247
OQU78515

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G69420.1	EES01073	AT2G42580.1	19000166
AT1G69420.1	EES02247	AT2G42580.1	19000166
AT1G69420.1	OQU78515	AT2G42580.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P10850_001	Banana	extracellular	3.97	72.73
TraesCS4B01G252500.1	Wheat	plasma membrane	70.25	72.65
Os03t0209500-01	Rice	endoplasmic reticulum, golgi, plasma membrane	71.74	72.58
TraesCS4D01G252800.1	Wheat	plasma membrane	69.59	71.84
TraesCS4A01G051700.1	Wheat	plasma membrane	69.59	71.84
Zm00001d028039_P004	Maize	plasma membrane, plastid	83.64	66.23
GSMUA_Achr10P...	Banana	plasma membrane	41.49	59.62
GSMUA_Achr5P16110_001	Banana	plasma membrane	26.61	58.12
HORVU4Hr1G069190.5	Barley	cytosol, peroxisome	67.93	58.05
GSMUA_Achr6P07830_001	Banana	endoplasmic reticulum, golgi, plasma membrane	56.2	54.49
EER99646	Sorghum	plasma membrane	55.37	54.3
CDX95936	Canola	plasma membrane	48.93	53.62
CDY44067	Canola	plasma membrane	48.1	51.14
CDY40920	Canola	plasma membrane	48.59	50.95
KRH74943	Soybean	plasma membrane	52.23	50.72
VIT_01s0113g00420.t01	Wine grape	endoplasmic reticulum, golgi, plasma membrane	52.73	50.47
CDY28549	Canola	plasma membrane	47.6	50.44
KRH70813	Soybean	plasma membrane	51.24	49.6
AT1G69420.1	Thale cress	plasma membrane	48.1	48.83
Bra004380.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	48.1	48.74
Bra038305.1-P	Field mustard	plasma membrane	47.11	48.39
KRG89539	Soybean	endoplasmic reticulum, golgi, plasma membrane	49.26	47.91
Solyc05g012790.2.1	Tomato	plasma membrane	49.75	47.78
CDY51503	Canola	plasma membrane	46.28	47.7
PGSC0003DMT400072839	Potato	plasma membrane	49.09	47.14
KRH50551	Soybean	plasma membrane	48.26	46.87
CDY07350	Canola	plasma membrane	44.13	46.43
Bra004000.1-P	Field mustard	cytosol, nucleus, plasma membrane	39.34	43.27
GSMUA_Achr4P10840_001	Banana	extracellular, mitochondrion, plasma membrane, plastid	14.88	37.66
GSMUA_Achr5P16100_001	Banana	endoplasmic reticulum, extracellular, plasma membrane	16.86	35.54
CDX84493	Canola	cytosol	8.1	35.51
EES12729	Sorghum	golgi	28.76	28.29
KXG35088	Sorghum	golgi	29.75	25.39
KXG25411	Sorghum	golgi	28.59	24.71
KXG30910	Sorghum	peroxisome	20.99	22.97

Protein Annotations

EnsemblPlants:KXG39903	EnsemblPlantsGene:SORBI_3001G461800	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	GO:GO:0016740	GO:GO:0016746	GO:GO:0019706	InterPro:Palmitoyltrfase_DHHC	MetaCyc:PWY-7420
PANTHER:PTHR22883	PANTHER:PTHR22883:SF105	PFAM:PF01529	PFscan:PS50216	ProteinID:KXG39903	ProteinID:KXG39903.1
SEG:seg	TMHMM:TMhelix	UniParc:UPI00081AC00F	UniProt:A0A1B6QPS9	MapMan:35.1	:

Description

hypothetical protein

Coordinates

chr1:+:73654364..73659162

Molecular Weight (calculated)

66138.8 Da

IEP (calculated)

7.968

GRAVY (calculated)

-0.159

Length

605 amino acids

Sequence
(BLAST)

001: MRKHGWQLPY HPLQVVAIAV FSALGFAFYV FFVPFVGTKP FQIVAMAIYT PLITCVVVLY IWCAATNPGD PGIFDSTKNL KLDKHEKHSY VNSDQGINHG
101: GRPLSETFGT ADNSEKLSSM LERKDSPSWP RFSGILSLVC LPFSCHCKQC LHSDSQPSEQ KMCEEGMFFC SLCEAEVLKN SKHCRVCDKC VDGFDHHCRW
201: LNNCIGKRNY KGFFALMASA VILLVMQWLS GALVLILCIV KRGEFSRQVV TKLGSSFSTV AFVIVVATCT ILAMVATVPL VQLLCFHILL VKKGISTYDY
301: IIALREQEDQ QEVPGHQSPQ MSIISSVTGF STASSFGPLH RGSWCTPPRL FLEDQFDAIP PEVGISQNSG SKKIKEEEGA RRKNGAVKIS PWTLARLNAE
401: EVSKAAAEAR KKSKILKPIA KHGISDNGSK PDHKLSYQRR LDRRGFPAEL SLDPLATLSA SGTESNYSDT ATEICGSLAP LQLEARSAFQ PSTAASTRNV
501: ASSPESSFDS PDLHPFRTSS ATGDEMQGAM THSAHRGIEF KRSSSDGYEA SGGEDSDRIP SRIVHRSSNW ANVFLNSSQG GPQADLLTTS SEGFLVNANV
601: SNSGS

Best Arabidopsis Sequence Match ( AT1G69420.2 )
(BLAST)

001: MRKHGWQLPY HPLQVVAVAV FLALGFAFYV FFAPFVGKKI HQYIAMGIYT PLITCVVGLY IWCAASDPAD RGVFRSKKYL KIPENGKFPL AKDIKDGCGS
101: ATGGAKSHDG TCVEDTENGS NKKLESSERS SLLRLLCSPC ALLCSCCSGK DESSEQMSED GMFYCSLCEV EVFKYSKHCR VCDKCVDRFD HHCRWLNNCI
201: GKRNYRKFFS LMVSAIFLLI MQWSTGIFVL VLCLLRRNQF NADIALKLGS SFSLIPFVIV VGVCTVLAML ATLPLAQLFF FHILLIKKGI STYDYIVALR
301: EQEQELEAGG GQQSPQMSMI SSFTGLSSAS SFNTFHRGAW CTPPRLFLED QFDVVPPENA SVSSYGKKSV VEERVKKKPQ PVKISPWTLA RLNAEEVSKA
401: AAEARKKSKI IQPVARRENP FVGLEASSSF GSSGRRMFPT KYEGVNNNGK QRRQSKRIRL PAELPLEPLM NVQTKAAMET STSSGLAPLQ LEARSAFQTS
501: RAMSGSGNVM VTSSPESSLD SHDIHPFRVS SEAEDAAQLN GFSSAVGLMG QQRGQQQQQQ LSMMMMPLSR STSDGYDASG GEDSDQVPSR NIHKSR

Arabidopsis Description

PAT22S-acyltransferase [Source:UniProtKB/TrEMBL;Acc:A0A178WF77]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.