CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 4
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
EER91475
EER93429
EER97483
EER98775
EER99646
EES00150
EES01469
EES02048
EES02279
EES02280
EES03170
EES03353
EES03565
EES07070
EES10764
EES12351
EES13089
EES13145
EES14146
EES15140
EES15248
EES16521
EES17613
EES18282
EES18539
EES19164
EES19325
EES19686
EES19704
EES19824
KXG20416
KXG21798
KXG21918
KXG22316
KXG22390
KXG22914
KXG26730
KXG27695
KXG27836
KXG28492
KXG29763
KXG35044
KXG37021
KXG38192
KXG39903
KXG40264
OQU78568
OQU80949
OQU82741
OQU84170
OQU84933
OQU86165
OQU89687
OQU92006
OQU92744
OQU92745

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G42580.1	EER97483	AT1G26650.1	19000166
AT2G42580.1	KXG40264	AT1G42970.1	19000166
AT2G42580.1	EER98775	AT1G53400.1	19000166
AT2G42580.1	EES03565	AT1G53400.1	19000166
AT2G42580.1	KXG22390	AT1G53400.1	19000166
AT2G42580.1	EER99646	AT1G69420.1	19000166
AT2G42580.1	KXG39903	AT1G69420.1	19000166
AT2G42580.1	EES07070	AT1G74050.1	19000166
AT2G42580.1	EES12351	AT1G74050.1	19000166
AT2G42580.1	EES13089	AT1G75750.1	19000166
AT2G42580.1	EES18282	AT1G75750.1	19000166
AT2G42580.1	KXG21918	AT1G75750.1	19000166
AT2G42580.1	EES13145	AT1G76920.1	19000166
AT2G42580.1	EES03353	AT1G80300.1	19000166
AT2G42580.1	KXG29763	AT1G80300.1	19000166
AT2G42580.1	OQU92006	AT2G01950.1	19000166
AT2G42580.1	EES01469	AT2G20670.1	19000166
AT2G42580.1	EES19824	AT2G20670.1	19000166
AT2G42580.1	EES10764	AT2G27330.1	19000166
AT2G42580.1	KXG22914	AT2G30520.1	19000166
AT2G42580.1	OQU82741	AT2G30520.1	19000166
AT2G42580.1	EES02048	AT2G41410.1	19000166
AT2G42580.1	EES16521	AT2G41410.1	19000166
AT2G42580.1	KXG27695	AT2G41410.1	19000166
AT2G42580.1	EES03170	AT3G02740.1	19000166
AT2G42580.1	EES14146	AT3G02740.1	19000166
AT2G42580.1	OQU84933	AT3G02740.1	19000166
AT2G42580.1	EES19686	AT3G10980.1	19000166
AT2G42580.1	OQU78568	AT3G10980.1	19000166
AT2G42580.1	EES19325	AT3G10985.1	19000166
AT2G42580.1	KXG37021	AT3G10985.1	19000166
AT2G42580.1	OQU92744	AT3G10985.1	19000166
AT2G42580.1	OQU92745	AT3G10985.1	19000166
AT2G42580.1	OQU80949	AT3G12630.1	19000166
AT2G42580.1	OQU89687	AT3G12630.1	19000166
AT2G42580.1	KXG22316	AT3G14400.1	19000166
AT2G42580.1	KXG28492	AT3G16640.1	19000166
AT2G42580.1	OQU84170	AT3G16640.1	19000166
AT2G42580.1	EER93429	AT3G24830.1	19000166
AT2G42580.1	EES17613	AT3G24830.1	19000166
AT2G42580.1	EES15140	AT3G52300.1	19000166
AT2G42580.1	KXG35044	AT3G52300.1	19000166
AT2G42580.1	EES15248	AT3G62120.1	19000166
AT2G42580.1	EES19704	AT3G62120.1	19000166
AT2G42580.1	EES02279	AT4G14440.1	19000166
AT2G42580.1	EES02280	AT4G14440.1	19000166
AT2G42580.1	EES18539	AT4G14440.1	19000166
AT2G42580.1	KXG38192	AT4G39050.1	21798944
AT2G42580.1	EER91475	AT5G03230.1	19000166
AT2G42580.1	KXG26730	AT5G03230.1	19000166
AT2G42580.1	EES00150	AT5G11670.1	19000166
AT2G42580.1	EES19164	AT5G11670.1	19000166
AT2G42580.1	KXG21798	AT5G11670.1	19000166
AT2G42580.1	OQU86165	AT5G11670.1	19000166
AT2G42580.1	KXG20416	AT5G38530.1	19000166
AT2G42580.1	KXG27836	AT5G42440.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d008930_P003	Maize	cytosol	93.27	94.52
Zm00001d039362_P002	Maize	cytosol	92.54	94.48
Os01t0218200-00	Rice	plastid	88.16	89.73
TraesCS3B01G162100.1	Wheat	cytosol	85.67	87.2
TraesCS3D01G144600.1	Wheat	cytosol	85.38	86.52
TraesCS3A01G143000.1	Wheat	cytosol	84.8	86.31
Zm00001d004494_P001	Maize	cytosol, mitochondrion	26.9	82.88
HORVU3Hr1G027650.2	Barley	mitochondrion	75.73	77.78
VIT_18s0001g09830.t01	Wine grape	cytosol	22.37	57.95
GSMUA_Achr4P08560_001	Banana	cytosol	57.75	57.66
GSMUA_Achr7P24480_001	Banana	cytosol	54.24	57.16
GSMUA_AchrUn_...	Banana	endoplasmic reticulum	41.37	56.26
EES01073	Sorghum	cytosol	55.56	55.8
KRH26223	Soybean	nucleus	54.24	54.88
KRH55099	Soybean	nucleus	54.24	54.72
OQU78515	Sorghum	cytosol	55.7	54.43
KRH21985	Soybean	cytosol	54.97	54.34
KRH22291	Soybean	plastid	45.91	53.77
VIT_19s0014g01470.t01	Wine grape	cytosol	54.24	53.54
GSMUA_Achr3P25160_001	Banana	cytosol	55.41	53.23
KRH27330	Soybean	cytosol	54.09	53.01
CDY25865	Canola	cytosol	50.73	52.74
Bra038116.1-P	Field mustard	cytosol	50.73	52.74
CDY25722	Canola	cytosol, plastid	51.17	52.47
CDY02514	Canola	cytosol, plastid	51.32	52.39
Bra030946.1-P	Field mustard	cytosol, plastid	51.32	52.39
VIT_12s0028g02240.t01	Wine grape	cytosol	54.09	52.11
CDY45930	Canola	cytosol	50.15	52.05
CDY61202	Canola	cytosol	50.88	51.86
Bra000267.1-P	Field mustard	cytosol	50.88	51.79
CDY42827	Canola	cytosol	50.44	51.42
PGSC0003DMT400054803	Potato	cytosol	22.08	51.36
CDY51514	Canola	cytosol	50.0	51.12
AT2G42580.1	Thale cress	cytosol	51.17	50.65
CDY55390	Canola	cytosol	49.42	50.52
PGSC0003DMT400032362	Potato	cytosol	51.32	50.14
AT1G53300.1	Thale cress	cytosol	51.17	50.07
Solyc07g062580.2.1	Tomato	cytosol	51.32	50.07
AT3G58620.1	Thale cress	cytosol	49.85	50.0
Bra004709.1-P	Field mustard	cytosol	47.95	49.92
Bra007405.1-P	Field mustard	cytosol	48.1	48.89
CDX71941	Canola	cytosol	47.81	48.52
CDY49237	Canola	cytosol	47.22	48.43
CDY34224	Canola	cytosol	4.82	47.83
KRH27037	Soybean	nucleus	45.91	46.52
PGSC0003DMT400054902	Potato	cytosol	19.44	44.48
GSMUA_AchrUn_...	Banana	cytosol	17.4	44.4
PGSC0003DMT400054904	Potato	cytosol	38.6	43.71
Solyc10g007240.1.1	Tomato	cytosol	37.28	42.93
AT3G14950.1	Thale cress	cytosol	44.88	42.05
Bra023795.1-P	Field mustard	cytosol	5.41	42.05
PGSC0003DMT400054796	Potato	cytosol, plastid	37.72	41.95
PGSC0003DMT400054911	Potato	cytosol	31.43	41.27
Solyc10g007230.1.1	Tomato	cytosol	35.67	40.94
PGSC0003DMT400054909	Potato	cytosol	24.12	40.05
Bra027292.1-P	Field mustard	cytosol	42.84	39.92
Solyc10g007250.1.1	Tomato	cytosol	16.23	39.78
CDX98517	Canola	cytosol	41.81	39.5
CDX97619	Canola	cytosol	41.81	39.45
Solyc10g007220.1.1	Tomato	cytosol	29.09	39.41
CDY32327	Canola	cytosol	41.96	39.37
CDY20095	Canola	nucleus	41.67	39.15
Solyc10g007420.2.1	Tomato	cytosol	23.68	38.12
Bra021583.1-P	Field mustard	nucleus	42.11	38.1
PGSC0003DMT400091014	Potato	nucleus	32.16	36.24
CDY40820	Canola	mitochondrion	14.77	35.94
Solyc10g007430.1.1	Tomato	cytosol, plastid	19.59	35.45
CDY34222	Canola	cytosol	15.79	35.06
CDY34223	Canola	cytosol	16.08	33.74
Bra023793.1-P	Field mustard	cytosol	20.18	33.5
Bra023794.1-P	Field mustard	cytosol, nucleus, plastid	15.79	33.13
KXG30730	Sorghum	cytosol, plastid	26.75	31.02
KXG33951	Sorghum	cytosol	9.36	25.3

Protein Annotations

Gene3D:1.25.40.10	MapMan:11.3.2.5	Gene3D:3.40.30.10	EntrezGene:8079505	UniProt:C5XKG8	EnsemblPlants:EES02247
ProteinID:EES02247	ProteinID:EES02247.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005623	GO:GO:0008150	GO:GO:0009987	GO:GO:0019725	GO:GO:0045454	InterPro:IPR011990
InterPro:IPR013026	InterPro:IPR013766	InterPro:IPR019734	PFAM:PF00085	PFAM:PF00515	PFAM:PF13432
PFscan:PS50005	PFscan:PS50293	PANTHER:PTHR22904	PANTHER:PTHR22904:SF402	SMART:SM00028	EnsemblPlantsGene:SORBI_3003G017500
SUPFAM:SSF48452	SUPFAM:SSF52833	InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf	InterPro:TPR_1	InterPro:TPR_repeat
InterPro:Thioredoxin-like_sf	InterPro:Thioredoxin_domain	UniParc:UPI0001A84E7F	RefSeq:XP_002457127.1	SEG:seg	:

Description

hypothetical protein

Coordinates

chr3:-:1545403..1550152

Molecular Weight (calculated)

73529.4 Da

IEP (calculated)

8.721

GRAVY (calculated)

-0.306

Length

684 amino acids

Sequence
(BLAST)

001: MSHRPPAPMP DTLSDAFAAA VLLSSTDKPD TLPPGRLSPV SPLPHSSSKH HHPTPSSSSG SSGSVSRAPL APASGLASRR SHSGEIPLPS DAPPRGAARP
101: GHRRTGSGPL IFTSGASACS SSATSPLTNA LPAGNICPSG RLAKPLPSSS SSSAATPPPP PPPRASRHDV LGSGTANYGH GSIVRSRAGA VGVGGVTDDD
201: AVLRRAMSAA DPEEVKRAGN DQYRKGCFEE ALRLYDRALA LCPDNAACRG NRAAALIGLR RLGEAVKECE EALRIDPSYG RAHHRLASLH IRLGHIEDAL
301: KHLSLATPQP DLLELHKLQT VEKHLGRCLD ARKAGDWKSV LRESDAAIAA GADSSALILA ARAEALLRLN LLDEADIAIS SASKLDYTSS CSSDAKFCGF
401: LANAYLFYVH AQVDMALGRF DHAVSSIDKA RIIDQGNTEV VTMHNRVKSV ARARSLGNEL FNSGKFSEAC LAYGEGLKQH PVNKVLYCNR AACRFKLEQW
501: EKSIEDCNEA LKIHPNYTKA LLRRAASYGK MERWAESVKD YEILRKELPG DTEVAEAYFH AQVALKSSRG EEVSNLKFGG EVEAIIGMEQ FQMATSLPGV
601: SVIHFMTPSN QQCCKISPFV NTLCTRYPSV NFLKVDVNES PAVARAENVR TIPTFKIYKN GMRVKEMICP SQQLLEYSVR HYGI

Best Arabidopsis Sequence Match ( AT2G42580.1 )
(BLAST)

001: MSHSRRLSLE PAIDSITGRF RDLQRNDDDV NKPDFRELDL GSPVSTLMPR GSASSSAAAT PTSSSGSSGS ASGKPSVSSQ MAKRLDDAYK SHSGELSSPG
101: SGMPTTTRIL KPGHRRSSST GTPLIFSGSS FTSATSHTSP QGGGSGATSA VSPNTGVLPA GNICPSGRIL KTGMASRTSS RTETLCTGTG NYGHGNVVRS
201: GGGGGTSGKA VRVAENGENP EELKRMGNDM YRRGSFSEAL SLYDRAILIS PGNAAYRSNR AAALTALRRL GEAVKECLEA VRIDPSYSRA HQRLASLYLR
301: LGEAENARRH ICFSGQCPDQ ADLQRLQTLE KHLRRCWEAR KIGDWKTAIK ETDAAIANGA DSSPQLVACK AEAFLRLKQI EDSDFCVSCI PRLDHHYHSQ
401: PQVKLFGMVV EAYVLCIQAQ VDMALGRFEN AVVKAERAAM LDQTNPEVVS VLNNVKMVVR ARTRGNELFS SGRFSEACVA YGDGLKQDDS NSVLYCNRAA
501: CWYKLGLWEK SVEDCNHALK SQPSYIKALL RRAASYGKLG RWEDAVKDYE FLRRELPGDS EVAESLERAK TVLMNRSQES KSLGFNNEVE AVSTLDKFKK
601: SVALPGVSVF HFKSSSNRQC EEISPFINTL CLRYPLVHFF MVDVEESMAL AKAESIRKVP TFKMYKNGDK VKEMVCPSHQ FLEDSIKHFL L

Arabidopsis Description

TTL3Inactive TPR repeat-containing thioredoxin TTL3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SIN1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.