CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
plastid 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
EES01073
EES02247
OQU78515

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G10985.1	EES01073	AT2G42580.1	19000166
AT3G10985.1	EES02247	AT2G42580.1	19000166
AT3G10985.1	OQU78515	AT2G42580.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d038029_P001	Maize	mitochondrion	38.06	83.93
Os05t0342000-00	Rice	cytosol, plastid	54.66	66.18
Bra034157.1-P	Field mustard	extracellular	20.24	48.08
CDX73898	Canola	extracellular	20.24	48.08
CDY00710	Canola	extracellular	20.24	48.08
CDY00985	Canola	cytosol	29.96	43.27
PGSC0003DMT400046104	Potato	cytosol	19.43	42.86
AT3G10985.1	Thale cress	plastid	19.03	42.73
KRG97665	Soybean	cytosol	27.13	42.41
Solyc06g050760.1.1	Tomato	cytosol	19.43	41.74
Solyc06g048820.1.1	Tomato	cytosol	18.22	41.67
KRH30153	Soybean	cytosol	24.7	41.5
GSMUA_Achr10P...	Banana	cytosol	18.22	41.28
KRH17129	Soybean	cytosol	25.91	40.0
KRH31209	Soybean	cytosol	27.53	39.53
Bra029887.1-P	Field mustard	cytosol	29.55	38.83
KXG37021	Sorghum	cytosol	33.2	38.68
GSMUA_Achr6P15760_001	Banana	cytosol	18.62	38.66
KRG98193	Soybean	cytosol	24.7	37.42
CDY08559	Canola	cytosol, plasma membrane	29.96	35.92
PGSC0003DMT400017004	Potato	extracellular, plasma membrane, plastid	27.94	32.39
OQU92745	Sorghum	plastid	34.01	32.18
VIT_06s0004g07550.t01	Wine grape	extracellular, vacuole	28.34	31.39
OQU92744	Sorghum	cytosol	34.82	28.57

Protein Annotations

EnsemblPlants:EES19325	EnsemblPlantsGene:SORBI_3009G100200	EntrezGene:8061318	Gene3D:3.10.450.50	InterPro:NTF2-like_dom_sf	InterPro:Wun1-like
PANTHER:PTHR33703	PANTHER:PTHR33703:SF9	PFAM:PF07107	ProteinID:EES19325	ProteinID:EES19325.1	RefSeq:XP_002440895.1
SEG:seg	SUPFAM:SSF54427	UniParc:UPI0001A88A97	UniProt:C5YW75	MapMan:35.2	:

Description

hypothetical protein

Coordinates

chr9:-:39224808..39226279

Molecular Weight (calculated)

25970.9 Da

IEP (calculated)

6.244

GRAVY (calculated)

-0.047

Length

247 amino acids

Sequence
(BLAST)

001: MLLESTHIPP IVPLYKDQPT STLAHTPPEQ ATLLLSSLYP GAVNSLTSPI ELASDKRDVV AVGGDAGFCA DDGEPSPAVS SKAVVEELYR ALERGDVDAV
101: RRLLNPDVDW WFHGPRAHQH LVLMRLLTGA GAGAGLPFKI RSLDAFGPTV LAEGTDVTGA LYWVHAWTVG PRGRVTEVRE YCNTALVVTR LGGGGGGGGG
201: GADADAAAAA AEEAKATLSR SPSKQVWQSR LLPDRARRNL PGLVLAI

Best Arabidopsis Sequence Match ( AT5G01740.1 )
(BLAST)

001: MEAHNVEIST RLTPEMKNQG TIELLYKALQ QGDTSTVTKV VASDVEWWFH GPHDCQHMMR LLTGEPPRQV SFRFEPSSVQ VVVPGHDCVI AEGWEGSRVY
101: WVHVWKLKDG VVTELREYFN TWLTVTDYSL GAVGWDMGRC TVWESVPRDL ARGSLPSLLL AI

Arabidopsis Description

AT5g01740/T20L15_10 [Source:UniProtKB/TrEMBL;Acc:Q9LZX2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.