CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH30153	Soybean	cytosol	78.53	87.07
KRH17129	Soybean	cytosol	58.9	60.0
TraesCS2D01G091300.1	Wheat	mitochondrion	28.22	47.42
TraesCS2B01G107100.1	Wheat	mitochondrion	28.22	45.54
TraesCS2A01G092200.1	Wheat	mitochondrion	27.61	44.55
KRG97665	Soybean	cytosol	41.1	42.41
KRH31209	Soybean	cytosol	41.1	38.95
KRH65508	Soybean	cytosol	34.36	38.36
Os07t0691300-01	Rice	mitochondrion	22.7	37.37
HORVU2Hr1G015360.4	Barley	cytosol	41.1	37.02
KRH00378	Soybean	cytosol	32.52	36.81
GSMUA_Achr10P...	Banana	cytosol	23.93	35.78
KRH40817	Soybean	cytosol	33.13	35.53
Zm00001d038029_P001	Maize	mitochondrion	23.93	34.82
VIT_06s0004g07550.t01	Wine grape	extracellular, vacuole	47.24	34.53
TraesCS4B01G188400.1	Wheat	cytosol	38.65	34.43
Zm00001d047696_P001	Maize	cytosol	42.33	33.99
TraesCS4A01G115600.1	Wheat	mitochondrion	26.99	32.59
HORVU4Hr1G054970.1	Barley	cytosol	26.99	31.88
HORVU2Hr1G015410.2	Barley	cytosol	36.81	31.09
KXG37021	Sorghum	cytosol	39.88	30.66
Os03t0299600-01	Rice	mitochondrion	42.33	30.26
GSMUA_Achr6P15760_001	Banana	cytosol	22.09	30.25
KRG98194	Soybean	cytosol	30.06	29.52
Os05t0342000-00	Rice	cytosol, plastid	36.2	28.92
KRH30154	Soybean	cytosol	28.83	28.83
OQU92745	Sorghum	plastid	42.33	26.44
Zm00001d022569_P001	Maize	cytosol	38.65	25.93
EES19325	Sorghum	cytosol	37.42	24.7
TraesCS4D01G189800.1	Wheat	plastid	40.49	24.35
Zm00001d028808_P001	Maize	plastid	37.42	23.28
OQU92744	Sorghum	cytosol	41.72	22.59

Protein Annotations

EMBL:ACUP02010851	EnsemblPlants:KRG98193	EnsemblPlantsGene:GLYMA_18G056400	EntrezGene:102664858	Gene3D:3.10.450.50	InterPro:NTF2-like_dom_sf
InterPro:Wun1-like	PANTHER:PTHR33703	PANTHER:PTHR33703:SF4	PFAM:PF07107	ProteinID:KRG98193	ProteinID:KRG98193.1
SUPFAM:SSF54427	UniParc:UPI00023DB4EB	UniProt:I1MZU1	MapMan:35.2	:	:

Description

hypothetical protein

Coordinates

chr18:+:4943904..4944856

Molecular Weight (calculated)

18347.9 Da

IEP (calculated)

5.137

GRAVY (calculated)

-0.049

Length

163 amino acids

Sequence
(BLAST)

001: MFTCVPELAN SQSQECLEEY VERNTRVVTE LYKALTSKDP ETLHGLVTQD LEWWFHGPPC HRHHLVPWLT GSSPSSKALV PQHMVGFGPV VIAEGFDDDH
101: LVWWVHAWTV TADGLITQVK EYVNTSVTVT LLSQQVLPNA SKCQCIWQSR LCDESVPGLI LPI

Best Arabidopsis Sequence Match ( AT4G17700.1 )
(BLAST)

001: MEEYEFLVRV REAGGFDIEH LMDTKPSSCV IGCREFDNND DYNAHIVLFA RMGIHKYNMI QGTNLQLSCV EKYNYRSPRV YSAFYITLIA KDPDACNSLV
101: TFQTRVVEEG FNMTKLSCNI ARPKPGPQEN AALPRHSVDL EPVDVFYKGS LPEWPPEDAF NDNI

Arabidopsis Description

Uncharacterized protein At4g17700 [Source:UniProtKB/Swiss-Prot;Acc:O23610]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.