Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G10985.1 | KRH22291 | AT2G42580.1 | 19000166 |
| AT3G10985.1 | KRH27037 | AT2G42580.1 | 19000166 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG97665 | Soybean | cytosol | 86.63 | 94.3 |
| Bra034157.1-P | Field mustard | extracellular | 36.63 | 60.58 |
| CDX73898 | Canola | extracellular | 36.63 | 60.58 |
| CDY00710 | Canola | extracellular | 36.05 | 59.62 |
| PGSC0003DMT400046104 | Potato | cytosol | 37.79 | 58.04 |
| Solyc06g048820.1.1 | Tomato | cytosol | 36.05 | 57.41 |
| TraesCS2D01G091300.1 | Wheat | mitochondrion | 31.98 | 56.7 |
| Solyc06g050760.1.1 | Tomato | cytosol | 37.79 | 56.52 |
| AT3G10985.1 | Thale cress | plastid | 34.88 | 54.55 |
| TraesCS2B01G107100.1 | Wheat | mitochondrion | 31.98 | 54.46 |
| TraesCS2A01G092200.1 | Wheat | mitochondrion | 30.23 | 51.49 |
| CDY00985 | Canola | cytosol | 51.16 | 51.46 |
| GSMUA_Achr10P... | Banana | cytosol | 31.98 | 50.46 |
| GSMUA_Achr6P15760_001 | Banana | cytosol | 33.14 | 47.9 |
| Bra029887.1-P | Field mustard | cytosol | 51.74 | 47.34 |
| KRH30153 | Soybean | cytosol | 38.95 | 45.58 |
| KRH65508 | Soybean | cytosol | 37.79 | 44.52 |
| HORVU2Hr1G015360.4 | Barley | cytosol | 45.93 | 43.65 |
| CDY08559 | Canola | cytosol, plasma membrane | 51.74 | 43.2 |
| TraesCS4B01G188400.1 | Wheat | cytosol | 45.93 | 43.17 |
| PGSC0003DMT400017004 | Potato | extracellular, plasma membrane, plastid | 52.91 | 42.72 |
| KRH00378 | Soybean | cytosol | 34.88 | 41.67 |
| KRG98193 | Soybean | cytosol | 38.95 | 41.1 |
| Os07t0691300-01 | Rice | mitochondrion | 23.26 | 40.4 |
| Zm00001d038029_P001 | Maize | mitochondrion | 26.16 | 40.18 |
| KRH17129 | Soybean | cytosol | 37.21 | 40.0 |
| TraesCS4A01G115600.1 | Wheat | mitochondrion | 31.4 | 40.0 |
| Zm00001d047696_P001 | Maize | cytosol | 46.51 | 39.41 |
| KRH40817 | Soybean | cytosol | 34.3 | 38.82 |
| HORVU4Hr1G054970.1 | Barley | cytosol | 30.81 | 38.41 |
| HORVU2Hr1G015410.2 | Barley | cytosol | 41.86 | 37.31 |
| Os03t0299600-01 | Rice | mitochondrion | 48.26 | 36.4 |
| KRH30154 | Soybean | cytosol | 34.3 | 36.2 |
| KRG98194 | Soybean | cytosol | 34.88 | 36.14 |
| KXG37021 | Sorghum | cytosol | 42.44 | 34.43 |
| Os05t0342000-00 | Rice | cytosol, plastid | 40.12 | 33.82 |
| Zm00001d022569_P001 | Maize | cytosol | 43.02 | 30.45 |
| OQU92745 | Sorghum | plastid | 45.93 | 30.27 |
| TraesCS4D01G189800.1 | Wheat | plastid | 47.09 | 29.89 |
| Zm00001d028808_P001 | Maize | plastid | 43.02 | 28.24 |
| EES19325 | Sorghum | cytosol | 39.53 | 27.53 |
| OQU92744 | Sorghum | cytosol | 47.67 | 27.24 |
Protein Annotations
| EMBL:ACUP02007129 | EnsemblPlants:KRH31209 | EnsemblPlantsGene:GLYMA_11G234300 | Gene3D:3.10.450.50 | InterPro:NTF2-like_dom_sf | InterPro:Wun1-like |
| PANTHER:PTHR33703 | PANTHER:PTHR33703:SF4 | PFAM:PF07107 | ProteinID:KRH31209 | ProteinID:KRH31209.1 | SUPFAM:SSF54427 |
| UniParc:UPI0006EDCE84 | UniProt:A0A0R0HU33 | MapMan:35.1 | : | : | : |
Description
hypothetical protein
Coordinates
chr11:-:32957014..32957532
Molecular Weight (calculated)
18321.6 Da
IEP (calculated)
5.577
GRAVY (calculated)
0.108
Length
172 amino acids
Sequence
(BLAST)
(BLAST)
001: KPQRGISFLE LANSQASGSD ADSSNKRLVL ALYDALNSGD SDAVVKIVAA DLEWWFHGPP SHQFLMRMLT GDSAADNSFR FLPQSIAAFG STVIVEGCDT
101: ARNIAWVHAC TVTDGIITQI REYFNTALTV TRIHDSGEIV PASSGAGRLP CVWESSVSGR VGKSVPGLVL AI
101: ARNIAWVHAC TVTDGIITQI REYFNTALTV TRIHDSGEIV PASSGAGRLP CVWESSVSGR VGKSVPGLVL AI
001: MRVLTGGVSP SSSSFEFVPL SVVSFGSTVI AEGCDAATSI SWIHAWTVAN GIITQVREYS NTSLTVTRIG NVVAGRRSAE IAPPSHCSSV WESQFSGRAG
101: KPVPGLVLAI
101: KPVPGLVLAI
Arabidopsis Description
SAG20Senescence associated gene 20 [Source:UniProtKB/Swiss-Prot;Acc:Q94AK6]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.