Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G10985.1 | KRH22291 | AT2G42580.1 | 19000166 |
| AT3G10985.1 | KRH27037 | AT2G42580.1 | 19000166 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH31209 | Soybean | cytosol | 94.3 | 86.63 |
| Bra034157.1-P | Field mustard | extracellular | 41.14 | 62.5 |
| CDX73898 | Canola | extracellular | 41.14 | 62.5 |
| CDY00710 | Canola | extracellular | 39.87 | 60.58 |
| PGSC0003DMT400046104 | Potato | cytosol | 41.14 | 58.04 |
| TraesCS2D01G091300.1 | Wheat | mitochondrion | 35.44 | 57.73 |
| Solyc06g048820.1.1 | Tomato | cytosol | 39.24 | 57.41 |
| Solyc06g050760.1.1 | Tomato | cytosol | 41.14 | 56.52 |
| AT3G10985.1 | Thale cress | plastid | 38.61 | 55.45 |
| TraesCS2B01G107100.1 | Wheat | mitochondrion | 35.44 | 55.45 |
| TraesCS2A01G092200.1 | Wheat | mitochondrion | 33.54 | 52.48 |
| CDY00985 | Canola | cytosol | 55.7 | 51.46 |
| GSMUA_Achr10P... | Banana | cytosol | 34.81 | 50.46 |
| GSMUA_Achr6P15760_001 | Banana | cytosol | 36.08 | 47.9 |
| KRH30153 | Soybean | cytosol | 44.3 | 47.62 |
| Bra029887.1-P | Field mustard | cytosol | 55.06 | 46.28 |
| KRH65508 | Soybean | cytosol | 40.51 | 43.84 |
| HORVU2Hr1G015360.4 | Barley | cytosol | 49.37 | 43.09 |
| TraesCS4B01G188400.1 | Wheat | cytosol | 49.37 | 42.62 |
| CDY08559 | Canola | cytosol, plasma membrane | 55.06 | 42.23 |
| KRH00378 | Soybean | cytosol | 37.97 | 41.67 |
| Os07t0691300-01 | Rice | mitochondrion | 25.95 | 41.41 |
| KRG98193 | Soybean | cytosol | 42.41 | 41.1 |
| Zm00001d038029_P001 | Maize | mitochondrion | 29.11 | 41.07 |
| PGSC0003DMT400017004 | Potato | extracellular, plasma membrane, plastid | 55.06 | 40.85 |
| TraesCS4A01G115600.1 | Wheat | mitochondrion | 34.81 | 40.74 |
| HORVU4Hr1G054970.1 | Barley | cytosol | 34.18 | 39.13 |
| Zm00001d047696_P001 | Maize | cytosol | 50.0 | 38.92 |
| KRH17129 | Soybean | cytosol | 39.24 | 38.75 |
| KRH40817 | Soybean | cytosol | 36.71 | 38.16 |
| HORVU2Hr1G015410.2 | Barley | cytosol | 44.94 | 36.79 |
| KRH30154 | Soybean | cytosol | 36.08 | 34.97 |
| KRG98194 | Soybean | cytosol | 36.71 | 34.94 |
| KXG37021 | Sorghum | cytosol | 46.2 | 34.43 |
| Os03t0299600-01 | Rice | mitochondrion | 49.37 | 34.21 |
| Os05t0342000-00 | Rice | cytosol, plastid | 42.41 | 32.84 |
| Zm00001d022569_P001 | Maize | cytosol | 46.84 | 30.45 |
| OQU92745 | Sorghum | plastid | 49.37 | 29.89 |
| TraesCS4D01G189800.1 | Wheat | plastid | 50.0 | 29.15 |
| Zm00001d028808_P001 | Maize | plastid | 46.84 | 28.24 |
| EES19325 | Sorghum | cytosol | 42.41 | 27.13 |
| OQU92744 | Sorghum | cytosol | 51.27 | 26.91 |
Protein Annotations
| EMBL:ACUP02010805 | EnsemblPlants:KRG97665 | EnsemblPlantsGene:GLYMA_18G022700 | Gene3D:3.10.450.50 | InterPro:NTF2-like_dom_sf | InterPro:Wound-induced_1/12_sub |
| InterPro:Wun1-like | PANTHER:PTHR33703 | PANTHER:PTHR33703:SF4 | PFAM:PF07107 | PIRSF:PIRSF007948 | ProteinID:KRG97665 |
| ProteinID:KRG97665.1 | SUPFAM:SSF54427 | UniParc:UPI0006EDA1FC | UniProt:A0A0R0F3M2 | MapMan:35.1 | : |
Description
hypothetical protein
Coordinates
chr18:+:1651215..1653524
Molecular Weight (calculated)
16882.9 Da
IEP (calculated)
5.547
GRAVY (calculated)
0.152
Length
158 amino acids
Sequence
(BLAST)
(BLAST)
001: MASGSDADSS NTRLVVALYD ALNSGDSNAV VKIVAADLEW WFHGPPSHQF LMRMLTGDSA ADNSFRFVPQ SIAAFGSTVI VEGCDSARNI AWVHAWTVTD
101: GMITQIREYF NTALTVTRIH DSGEIVPARS GAGRLPCVWE SSVSGRVGKS VPGLVLAI
101: GMITQIREYF NTALTVTRIH DSGEIVPARS GAGRLPCVWE SSVSGRVGKS VPGLVLAI
001: MRVLTGGVSP SSSSFEFVPL SVVSFGSTVI AEGCDAATSI SWIHAWTVAN GIITQVREYS NTSLTVTRIG NVVAGRRSAE IAPPSHCSSV WESQFSGRAG
101: KPVPGLVLAI
101: KPVPGLVLAI
Arabidopsis Description
SAG20Senescence associated gene 20 [Source:UniProtKB/Swiss-Prot;Acc:Q94AK6]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.